prot_S-latissima_F_contig96.17333.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17333.1
Unique Nameprot_S-latissima_F_contig96.17333.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length430
Homology
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.900e-77
Identity = 206/447 (46.09%), Postives = 251/447 (56.15%), Query Frame = 0
Query:    1 VLAQAACLVRTEMERNPNTLFLVGTYSIGKERVLEAVAKAAGSRWSLLHFLEEARASGAPFTSVVGVRPTGWTHTNTXXXXXXXXXXXXXXAASPAGGEFNGQWLRPSPLKAGGRGSFE------GAAASSLAREARCEDGSGEFEARWDDDDQDDESAAWGGASXXXXXXXXXEGVVGRRVTRVGMEHAKRPSALPPVSPAGGRWTGKKPWVEGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYFGKSATTRAITNGGXXXXXXXXSPAPSETSRNSPQKRPRV---TGGCVRLRPRSAKKPSQKGQRETSAQHLSMMGLAAGRR--HHPPSPVMDRFELRSARED---GEEG-LRRAVV--EAAYPRVAGKRTGAGPAGAGAGGK-AGVDLHLVDVQAQRAIMEDIERRK 429
            VLAQA  LVR E++R+PNTLFLVGTYSIGKE+VLEAVAK   S  +L   L +ARA GAPFTSVVGVRPTGWTHTN    XXXXXXX      S  GG           +++G     E      G  +SS  +++  +D SGE E   + +DQDDE+AAWG            + V    V  V               PA G WTGKKPWV+G ARVYSLPYSEHSSFTQL+DFVR VRPKKIVPTVNA S+ +VEKML HFL+FMDLS DR+RL+SYF K     A  + G        + A +  S  + ++R      TG    L P  A+KPS+   +      L      +G     +P  P  +   LRS   +   G+ G L  A +  EAA P     R+    AGA A    + V+L LVDV+AQ+AIM DIERRK
Sbjct:  163 VLAQATQLVRMELQRDPNTLFLVGTYSIGKEKVLEAVAKDTNSPATLREALTKARAGGAPFTSVVGVRPTGWTHTNARKGXXXXXXXGIK---SSIGGRSXXXXXGGPAVRSGAEEREETGKEGSGITSSSKPQDSVGDDISGEPELLSEWEDQDDEAAAWGAGLEEDGNEETMQ-VTANGVGVVPXXXXXXXXXXTVAGPAVGPWTGKKPWVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDPPSATASRGIDMLSSSGARASNPFSSPAEKRRKNANSSTGWPPNLFP--AEKPSRPPLKAAERNRLHENDATSGTTLDDYPCVPRREGEALRSRAGEQPCGDAGRLPEATMTAEAAVPAAMPARSFVADAGARAASTPSAVELDLVDVEAQKAIMADIERRK 603          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: K8YRT5_NANGC (Hydrolase involved in interstrand cross-link repair n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRT5_NANGC)

HSP 1 Score: 95.1 bits (235), Expect = 6.820e-19
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  205 PWV--EGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYFGKSATTR 282
            PWV  +  A++Y +PYSEHSS+T+LR FVRA+RP+KI+PTV A     VE+ L+HFL  MDLS DR RLD Y G+    R
Sbjct:   59 PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKR 138          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A7R9T7F0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T7F0_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.900e-19
Identity = 87/292 (29.79%), Postives = 120/292 (41.10%), Query Frame = 0
Query:    1 VLAQAACLVRTEMERNPNTLFLVGTYSIGKERVLEAVAKAAGSRWSLLHFLEEARASGAPFTSVVGVRPTGWTHTNTXXXXXXXXXXXXXXAASPAGGEFNGQWLRPSPLKAGGRGSFEGAAASSLAREARCEDGSGEFEARWDDDDQDDESAAWGGASXXXXXXXXXEGVVGRRVTRVGMEHAKRPSALPPVSPAGGRWTGK--------KPWVE--GNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKML-RHFLDFMDLSLDRRRLDSYFGKSATT 281
            VL +   + R E+ R P TLFL G+YSIGKER ++AV + A SR                  SV   R                              E +G W   + +                     CED   E  AR                          +G   R +  +  + A R  A+   SP G  +T K         PW+E  G  R Y++PYSEHSS+T+LR+F++ ++PKKI PTVNA +    EK++ +HFLD +DL  D  RLD YF  SA++
Sbjct:  199 VLNKMRQIARDELAREPRTLFLCGSYSIGKERAIQAVCQGAQSR-----------------ASVTARRKKSL--------------------------ELSGWWRDDAFV---------------------CEDDDAEEAAR-----------------CQVRVCGLGKGSNHRAMMEIMAKEAPRWRAVVAFSPTGWSYTKKMDEDGFNVNPWIENEGRTRTYAIPYSEHSSYTELREFIKFLKPKKITPTVNAITPKDREKLVNKHFLDLVDLKQDVNRLDYYFKNSASS 409          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A7S0PPJ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PPJ7_MICPS)

HSP 1 Score: 92.8 bits (229), Expect = 1.580e-18
Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 0
Query:  204 KPWVE--GNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYF 275
            KPW+E  G  RVYS+PYSEHSSF +L +FV+ +RP+++ PTVNA +    +++++HFL+F DL+ D+ RLD YF
Sbjct:   44 KPWIENDGRTRVYSVPYSEHSSFVELVEFVKRIRPRRVTPTVNADTKADKDRIMKHFLEFTDLAADKNRLDHYF 117          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.250e-18
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  205 PWV--EGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYFGKSATTR 282
            PWV  +  A++Y +PYSEHSS+T+LR FVRA+RP+KI+PTV A     VE+ L+HFL  MDLS DR RLD Y G+    R
Sbjct:  228 PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKR 307          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.250e-17
Identity = 104/314 (33.12%), Postives = 137/314 (43.63%), Query Frame = 0
Query:    1 VLAQAACLVRTEMERNPNTLFLVGTYSIGKERVLEAVAKAAGSRWSLLHFLEEARASGAPFTSVVGVRPTGWTHTNTXXXXXXXXXXXXXXAASPAGGEFNGQWLRPSPLKA------GGRGSFEG----------------AAASSLAREARCEDGS-GEFEARWDDDDQDDESAAWGGASXXXXXXXXXEG------VVGRRVTRVG-MEHAKRPSALPPVSPAGGRWTGKKPWV--EGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYFGKSATTR 282
            VLA  + +   E    P+T+F VGTYSIGKER + AVA   G  ++  H  E      + +   V V     +H                 A +   G+  G  +R    +       GG     G                        E + E G  G+ E  W+      E        XXXXXXXXXEG      VVG R T    + + K      P SP+        PWV  +  A++Y +PYSEHSS+T+LR FVRA+RP+KI+PTV A     VE+ L+HFL  MDLS D+ RLD Y G+    R
Sbjct:  164 VLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGKVYADKH-KERTLRLASEWDEEVFVSEMEGSHVRMSWLGRLRPEKMGPRAGARRMGQERGVEMRKEGREGEEGKDVGGNEEHSGWXXXXXXXXXXXXXXXXXXXXXXXEGKTEVGEKGDDEGGWEM-----EXXXXXXXXXXXXXXXXXEGDDACRPVVGFRPTGWSYLRNRKTARDACPSSPSS-----YTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRYLGRGEEKR 466          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A7S0Z9D4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9D4_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 1.170e-16
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 0
Query:  184 AKRPSALPPVSPAGGRWTGK---------KPWVE--GNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKML-RHFLDFMDLSLDRRRLDSYF 275
            A R +A+   +P G  WT K          PWVE  G  R YS+PYSEHSS+T+LR+FV+  +PKKI PTVNA++    +K++ +HFLD +DL  D  +LD YF
Sbjct:   63 APRWNAVVAFAPTGWSWTKKMETDEGFDVNPWVENDGRTRTYSVPYSEHSSYTELREFVKFFKPKKITPTVNAATRKERDKLVNKHFLDLVDLKQDSSKLDYYF 166          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A5J4Y9L3_9CHLO (DNA cross-link repair SNM1-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9L3_9CHLO)

HSP 1 Score: 92.4 bits (228), Expect = 2.240e-16
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:  208 EGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSYFGKSATTRA 283
            EGN  +Y +PYSEHSSF +LRD V+ +RPK+I+PTVN   A +   ++  F D MDLS D+ RLDSYFG++A+  A
Sbjct:  342 EGNVTIYGIPYSEHSSFAELRDCVKRLRPKRIIPTVNCPDAASARAIVDRFADLMDLSRDKSRLDSYFGRTASAPA 417          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A812W2K7_SYMMI (Dclre1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W2K7_SYMMI)

HSP 1 Score: 89.0 bits (219), Expect = 3.390e-15
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0
Query:  194 SPAGGRWTGK---------KPWVE--GNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSY-FGKSATTRA 283
            SP G  W+ K         + W+E  G  RVYS+PYSEHSSFT+L+ FV A++P +++PTVN+ +  + E+M+  FLD +DL  D  R+D Y FG S+++ A
Sbjct:  281 SPTGWAWSPKAMAKGSAGCRAWIENDGRTRVYSVPYSEHSSFTELQSFVSAIKPGRLIPTVNSETRESKERMMAPFLDVLDLKCDPERMDHYIFGGSSSSSA 382          
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Match: A0A812LBC2_9DINO (Calmodulin n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812LBC2_9DINO)

HSP 1 Score: 89.0 bits (219), Expect = 4.050e-15
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0
Query:  194 SPAGGRWTGK---------KPWVE--GNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPAVEKMLRHFLDFMDLSLDRRRLDSY-FGKSATTRA 283
            SP G  W+ K         + W+E  G  RVYS+PYSEHSSFT+L+ FV A++P +++PTVN+ +  + E+M+  FLD +DL  D  R+D Y FG S+++ A
Sbjct:  925 SPTGWAWSPKAMAKGSAGCRAWIENDGRTRVYSVPYSEHSSFTELQSFVSAIKPGRLIPTVNSETRESKERMMAPFLDVLDLKCDPERMDHYIFGGSSSSSA 1026          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI1.900e-7746.09DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
K8YRT5_NANGC6.820e-1956.25Hydrolase involved in interstrand cross-link repai... [more]
A0A7R9T7F0_9CHLO6.900e-1929.79Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A7S0PPJ7_MICPS1.580e-1852.70Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
W7THR8_9STRA9.250e-1856.25Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA2.250e-1733.12DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S0Z9D4_9CHLO1.170e-1647.12Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A5J4Y9L3_9CHLO2.240e-1653.95DNA cross-link repair SNM1-like n=1 Tax=Trebouxia ... [more]
A0A812W2K7_SYMMI3.390e-1544.12Dclre1 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A812LBC2_9DINO4.050e-1544.12Calmodulin n=2 Tax=Symbiodinium TaxID=2949 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 57..246
e-value: 1.5E-17
score: 63.8
NoneNo IPR availableGENE3D3.40.50.12650coord: 1..49
e-value: 4.3E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR23240:SF6DNA CROSS-LINK REPAIR 1A PROTEINcoord: 200..271
coord: 3..44
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 200..271
coord: 3..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:135124..140265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17333.1mRNA_S-latissima_F_contig96.17333.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 135124..140265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17333.1 ID=prot_S-latissima_F_contig96.17333.1|Name=mRNA_S-latissima_F_contig96.17333.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=430bp
VLAQAACLVRTEMERNPNTLFLVGTYSIGKERVLEAVAKAAGSRWSLLHF
LEEARASGAPFTSVVGVRPTGWTHTNTTTSTTTTTKGGGKSAASPAGGEF
NGQWLRPSPLKAGGRGSFEGAAASSLAREARCEDGSGEFEARWDDDDQDD
ESAAWGGASGGAEGKGEGEGVVGRRVTRVGMEHAKRPSALPPVSPAGGRW
TGKKPWVEGNARVYSLPYSEHSSFTQLRDFVRAVRPKKIVPTVNASSAPA
VEKMLRHFLDFMDLSLDRRRLDSYFGKSATTRAITNGGGGGGGGGGSPAP
SETSRNSPQKRPRVTGGCVRLRPRSAKKPSQKGQRETSAQHLSMMGLAAG
RRHHPPSPVMDRFELRSAREDGEEGLRRAVVEAAYPRVAGKRTGAGPAGA
GAGGKAGVDLHLVDVQAQRAIMEDIERRKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL