prot_S-latissima_F_contig96.17332.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17332.1
Unique Nameprot_S-latissima_F_contig96.17332.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length183
Homology
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 4.620e-97
Identity = 143/172 (83.14%), Postives = 154/172 (89.53%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGGRTTLHTGDFRADKSVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMR 172
            MATQDEKIKWVEGSPF+VDGFRFTNPRC+HYLLTHFHSDHTTGLYKSFSAG IY S GTANLI ELMGVN ERVVALPM+ PV+VAGF+LTL+DANHCPAAVMFVIRDPRPGGRTTLHTGDFRA +SVC NPVV SLKG++DSLYLDTTYCGPRH FPDQ +  A     +R
Sbjct:    1 MATQDEKIKWVEGSPFMVDGFRFTNPRCRHYLLTHFHSDHTTGLYKSFSAGKIYCSHGTANLIVELMGVNRERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAESVCRNPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVR 172          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 190 bits (483), Expect = 4.240e-53
Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGG-----RTTLHTGDFRADKSVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMRRHRGTY 178
            MA Q E IKWV  +PF+VDGFRF  PRCKHY L+H+HSDHT GL  SFSAGTIY S+ TANL+ + M +NP  +  LP++ P++V G  +TL+DANHCP AV+F+ + P P G     +  LHTGD R    +  +P +A  K ++D L+LDTTY  P+H FP Q  A AD    MR+ R  +
Sbjct:    1 MAEQVENIKWVPNTPFMVDGFRFQTPRCKHYWLSHYHSDHTIGLSTSFSAGTIYCSKVTANLLVKDMRINPSCIQPLPLDTPLLVDGVHVTLIDANHCPGAVLFLFKTPAPPGSEFPEQVILHTGDMRWHPRMGRHPALA--KQRIDMLFLDTTYASPKHVFPCQENAIADIVKVMRKERDAH 181          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A1Y1HYN4_KLENI (Putative DNA repair metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYN4_KLENI)

HSP 1 Score: 179 bits (454), Expect = 7.850e-49
Identity = 88/177 (49.72%), Postives = 115/177 (64.97%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGGRTT---LHTGDFRADKSVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMRRH 174
            MA Q E IKW+ G+ F+VDGF+F N RC+ Y LTHFHSDHT GLY+SF++GTI+ SR TA L+   MG+  + +  LPM+K V + G E+T LDANHCP +VM + + P  GGR     LHTGDFR  + +   P + +    +D++YLDTTY  PRH FP Q  A A      R+H
Sbjct:    1 MALQQEAIKWIAGTDFMVDGFKFQNLRCRRYFLTHFHSDHTIGLYRSFNSGTIFCSRITAALLINCMGLRSDCIQVLPMDKTVTIDGVEVTALDANHCPGSVMLLFKVPGHGGRPAQVILHTGDFRYHERMADYPSLRNTL--IDTIYLDTTYAYPRHTFPSQEDAIATTVRLCRKH 175          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: I0YMI9_COCSC (DRMBL-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMI9_COCSC)

HSP 1 Score: 164 bits (414), Expect = 1.560e-46
Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 0
Query:   11 VEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGG-----RTTLHTGDFRADKSVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMR 172
            V  + F+VDGFRF + RCKHY L+H+HSDHTTGL  SFS+GTIY S  TANL+ + M +NP  +  LP+N P++V G  +TL+DANHCP AV+F+ + P P G     +  LHTGD R    +  +P + + +  +D L+LDTTY  P+H FP Q  A AD    M+
Sbjct:    1 VPNTRFMVDGFRFQSSRCKHYWLSHYHSDHTTGLTTSFSSGTIYCSAVTANLLVKDMHINPSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRWHPRMGRHPALKNQR--IDMLFLDTTYASPKHVFPCQEDAIADIVRVMK 165          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.810e-45
Identity = 81/162 (50.00%), Postives = 104/162 (64.20%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGGRTTLHTGDFRADKSVC--TNPVVASLKGKVDSLYLDTTYCGPRHAFPDQ 160
            MA+Q E+IKW+EG+ F+VDGF F +P+C  Y LTHFHSDH  GL  SF  GTIY S  T  L+   +GV P+ V  LP+ KP  + G E+TLLDANHCP AVM +  + +    T LHTGDFRA +++   T   +     +V  LYLDTTYC  ++ FP Q
Sbjct:    1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKS-TILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQ 161          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.120e-44
Identity = 82/163 (50.31%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGGRTTLHTGDFRADKSVCTNPVVASLKGK---VDSLYLDTTYCGPRHAFPDQ 160
            MA+Q E+IKW+EG+ F+VDGF F +P+C  Y LTHFHSDH  GL  SF  GTIY S  T  L+   +GV P+ V  LP+ KP  + G E+TLLDANHCP AVM +  + +    T LHTGDFRA +++ T    + L+ +   V +LYLDTTYC  ++ FP Q
Sbjct:    1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTN-TTILHTGDFRASEAL-TERTASWLRDRDLRVRTLYLDTTYCNAKYTFPSQ 161          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A087SIS5_AUXPR (DNA cross-link repair 1 protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIS5_AUXPR)

HSP 1 Score: 153 bits (386), Expect = 3.410e-43
Identity = 87/188 (46.28%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGG----RTTLHTGDFRADK-SVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMRRHRGTYSGRAL 183
            MA+Q E +K++ G+   VDGFRF  P  +H+ LTHFH DHTTGL K F AGTIY S  TA L+   MG+    V  L  +  V V G  +T L ANHCP AVMF+   P  GG    RT LHTGD R D  ++   P + +L G +D+L LDTTYC PR  FP Q +        +RR     +GR L
Sbjct:    1 MASQVEALKYIPGTSLNVDGFRFLRPGARHFFLTHFHGDHTTGLTKGFDAGTIYCSPVTARLLIRDMGLRAGVVCPLSPHVTVEVGGVAVTPLPANHCPGAVMFLFVIPGDGGGRPPRTVLHTGDMRWDDGAMMAYPALRAL-GTLDTLVLDTTYCAPRWTFPPQEQVIQAAAEFVRREAARSAGRVL 187          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: E1ZBA0_CHLVA (Lactamase_B domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZBA0_CHLVA)

HSP 1 Score: 156 bits (394), Expect = 7.600e-42
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGGRTTLHTGDFRADKSVCTNPVVASLKGK-VDSLYLDTTYCGPRHAFPDQRK 162
            MA+Q E IKWV G+PF+VDGFRF +P C+ + LTH HSDHTTGL +SFSAG IY S  TA L+   MG+ P+ +  LP++ P  + G E+  +DANHCP AVMF+ R P     T LHTGD R    +  +   A+L G+ VD L LDTTY   +  FP Q +
Sbjct:    1 MASQVEAIKWVPGTPFLVDGFRFQHPACRAFFLTHMHSDHTTGLSRSFSAGPIYCSPITARLLRCDMGIRPDLIRILPLDLPTTICGVEVVPIDANHCPGAVMFLFRAPT----TILHTGDVRWQAGMAQH---AALTGRQVDVLMLDTTYSQRKWTFPPQEE 156          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A2P6TNP6_CHLSO (DNA cross-link repair SNM1 isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNP6_CHLSO)

HSP 1 Score: 155 bits (393), Expect = 1.040e-40
Identity = 83/170 (48.82%), Postives = 109/170 (64.12%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDP--RPGGRTT--LHTGDFRADKSVCTNPVVASLKGK-VDSLYLDTTYCGPRHAFPDQRKASA 165
            MA+Q E IKWV G+ F+VDGFRF +P C+ Y LTH HSDHTTGL KSF+AG IY S  TA ++    G+ P+ +  L +++   +AG E+T +DANHCP A MF+ + P   PG +    LHTGD R    +  +P   +LKG+ VD L LDTTYC PR + P Q +  A
Sbjct:  427 MASQVEAIKWVPGTKFLVDGFRFQHPNCRAYFLTHAHSDHTTGLSKSFNAGPIYCSPVTARVLRHDFGLRPDCLRVLELDETATIAGVEVTPMDANHCPGAAMFLFKVPPSSPGSKAQVILHTGDMRWQPWMAEHP---ALKGQQVDILILDTTYCTPRWSLPPQSEVVA 593          
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Match: A0A1D2A4B8_AUXPR (Lactamase_B domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A4B8_AUXPR)

HSP 1 Score: 153 bits (386), Expect = 3.050e-40
Identity = 87/188 (46.28%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    1 MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSAGTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPAAVMFVIRDPRPGG----RTTLHTGDFRADK-SVCTNPVVASLKGKVDSLYLDTTYCGPRHAFPDQRKASADGCLAMRRHRGTYSGRAL 183
            MA+Q E +K++ G+   VDGFRF  P  +H+ LTHFH DHTTGL K F AGTIY S  TA L+   MG+    V  L  +  V V G  +T L ANHCP AVMF+   P  GG    RT LHTGD R D  ++   P + +L G +D+L LDTTYC PR  FP Q +        +RR     +GR L
Sbjct:    1 MASQVEALKYIPGTSLNVDGFRFLRPGARHFFLTHFHGDHTTGLTKGFDAGTIYCSPVTARLLIRDMGLRAGVVCPLSPHVTVEVGGVAVTPLPANHCPGAVMFLFVIPGDGGGRPPRTVLHTGDMRWDDGAMMAYPALRAL-GTLDTLVLDTTYCAPRWTFPPQEQVIQAAAEFVRREAARSAGRVL 187          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI4.620e-9783.14DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A8J9WR85_9CHLO4.240e-5350.82Probable DNA cross-link repair 1A protein at N-ter... [more]
A0A1Y1HYN4_KLENI7.850e-4949.72Putative DNA repair metallo-beta-lactamase family ... [more]
I0YMI9_COCSC1.560e-4648.50DRMBL-domain-containing protein (Fragment) n=1 Tax... [more]
W7THR8_9STRA4.810e-4550.00Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA2.120e-4450.31DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A087SIS5_AUXPR3.410e-4346.28DNA cross-link repair 1 protein n=1 Tax=Auxenochlo... [more]
E1ZBA0_CHLVA7.600e-4250.31Lactamase_B domain-containing protein n=1 Tax=Chlo... [more]
A0A2P6TNP6_CHLSO1.040e-4048.82DNA cross-link repair SNM1 isoform X1 n=1 Tax=Chlo... [more]
A0A1D2A4B8_AUXPR3.050e-4046.28Lactamase_B domain-containing protein n=2 Tax=Auxe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 3..177
e-value: 2.5E-48
score: 166.3
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 19..156
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 2..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:118759..133689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17332.1mRNA_S-latissima_F_contig96.17332.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 118732..133689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17332.1 ID=prot_S-latissima_F_contig96.17332.1|Name=mRNA_S-latissima_F_contig96.17332.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=183bp
MATQDEKIKWVEGSPFIVDGFRFTNPRCKHYLLTHFHSDHTTGLYKSFSA
GTIYTSRGTANLITELMGVNPERVVALPMNKPVIVAGFELTLLDANHCPA
AVMFVIRDPRPGGRTTLHTGDFRADKSVCTNPVVASLKGKVDSLYLDTTY
CGPRHAFPDQRKASADGCLAMRRHRGTYSGRAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro