prot_S-latissima_F_contig952.17262.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig952.17262.1
Unique Nameprot_S-latissima_F_contig952.17262.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length912
Homology
BLAST of mRNA_S-latissima_F_contig952.17262.1 vs. uniprot
Match: D7G379_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G379_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 2.170e-124
Identity = 318/772 (41.19%), Postives = 392/772 (50.78%), Query Frame = 0
Query:    4 VKEACLLYGDGSEPRWPRWTKELVDGPLLAA-EGASPATLVVSVCAGWRFPPVRLVRRSEESALFDFEVRFRAASL--GEAGLLGCIERLRDEIMEDFPPEVLLQRPGAVGHLAALLRAPSASEKILEESLSAAKRLLERLVSSARLHFDDAFLPPSKPDNLDGSGXXXXXXXXXXXXXXXRDGGWDAPRSLPLPPPRMPFSSLPSAASASXXXAAAIGGQEFPRHAILGEDEGGRRGLDHHRFAPGGXXXXXXXXXXXXXXXXXEAAVATLLSFRYPQSSGRASIKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXWXIXXXXXXXEGRAECSTDGGEGAGGISVCGALYALFLSVCPLLGYGGXXXXXXXXXSRGTIDAGAAATVVGEGWSPAVLMGAVAAAGSGPQMRPSRVSVLTGELLQAIIPFLLEPRSYPIAGWGRQKSIPGRGRNGPIPGVEVG-ISSHLDALRVQELLCSMGRVLGDTGEGV------PSPAAAIALQLIFAILPSDVGSEDNEDDFA-----TSPPAIVLPPELIALLRGLVLDPAVAESQPWLRPRLMPYVARADPCGARLFQSVQDLVADATSVL-LTVEGVESGGKEEGDEGLAEGGPA-------WGWAEGQLRQVERALPLLRTVDDARVVGAALALWAAAAQTSFSWKSGARGGSSAFSAQRAGAKVVARLLQGEFGEKARSQALWMLEGLTGPGPA-GAGRGCLAVPPRLAVAMARRGFSDPLLPPSAVMRGAVAVAVILGGGIG 751
             +EAC L+GDGS+PRWPRWTK+ VDGPLL+A + AS  T+V  +CAGWRFP VRLVR SEESALFDFEVRFR AS   GE GLL C+  LRDEI+ED+PPEVLLQRPG+ G L +LLR PSASE+++EE+LS A RLLERLV SARLH D +FLPPS   ++D                                                      I  Q  P     GE +G   G     + PGG                  A  +T+   RY +  G    K  AA                                    E   E    G  G+GG+SVCGAL+ALFLS CPLLGY           S G    G       +G  PA          S P   PSRV+VL GE+LQA+IP+LLEP+      WG        G  G   G   G I+  +DALRVQE+LCS G+VLG TG GV      P P  +IA+QL+  + P D+    N++ FA      +  ++ LPP L+  LR +VLD   AE +P LR RL P +ARA P  A + Q+ Q L   A  VL +  EG   G      EG   G  A       W W  G L Q++ ALPLLR+VDD R+V  A+ALW +AA  +FS  SG+        A+  G  VV +L+ GEFGE+A +QA+ ML+ LT       AG GC+ VPP  A AMAR G +DP   P    R A A+AV+LGGG G
Sbjct:  345 TEEACALFGDGSKPRWPRWTKDFVDGPLLSAGKNASSETVVACLCAGWRFPHVRLVR-SEESALFDFEVRFRTASTPAGETGLLRCLRHLRDEIVEDYPPEVLLQRPGSFGRLLSLLRTPSASERVIEEALSTASRLLERLVRSARLHQDPSFLPPSPSASVD------------------------------------------------------IDDQRAP---AAGESDGYAFGGAPAGYVPGGGGA---------------AGGSTVFGTRYGRHGGG---KRGAAGSTGGG------------------------------EVPEELGKAGPGGSGGVSVCGALFALFLSACPLLGYPAANKARVTLASGG----GRVNRSDEKGGGPA----------SEPSGGPSRVAVLAGEMLQAVIPYLLEPQGND-GDWGESTDSASAGGVG---GAAAGMITCPVDALRVQEVLCSTGQVLGYTGGGVAPDGGAPEPLVSIAVQLLLLLSPDDL-VPGNDEQFAGGGCTVAETSVKLPPRLVLQLRDMVLDAGEAERRPSLRSRLWPLLARASPKEAEMLQAAQVLTRQAALVLNIGREGAGGGSGPGMIEGCGGGAAANRGTSCDWSWVRGTLGQIKAALPLLRSVDDPRLVSIAVALWFSAANAAFSSSSGSTSPVEPREAEGIGGAVVVKLVHGEFGERASAQAMHMLDELTAADDTVAAGSGCIQVPPSFAEAMARHGLADPRKRPLTATRLAAALAVVLGGGNG 991          
BLAST of mRNA_S-latissima_F_contig952.17262.1 vs. uniprot
Match: A0A6H5JNE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE1_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.540e-82
Identity = 223/529 (42.16%), Postives = 260/529 (49.15%), Query Frame = 0
Query:    4 VKEACLLYGDGSEPRWPRWTKELVDGPLLAAEG-ASPATLVVSVCAGWRFPPVRLVRRSEESALFDFEVRFRAASL--GEAGLLGCIERLRDEIMEDFPPEVLLQRPGAVGHLAALLRAPSASEKILEESLSAAKRLLERLVSSARLHFDDAFLPPSKPDNLDGSGXXXXXXXXXXXXXXXRDGGWDAPRSLPLPPPRMPFSSLPSAASASXXXAAAIGGQEFPRHAILGEDEGGRRGLDHHRFAPG----------------------------GXXXXXXXXXXXXXXXXXEAAVATLLSFRYPQSSGRASIKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXWXIXXXXXXXEGRAECSTDGGE-----------GAGGISVCGALYALFLSVCPLLGYGGXXXXXXXXXSRGTIDAGAAATVVGE--GWSPAVLMGAVAAAGSGPQMRPSRVSVLTGELLQAIIPFLLEPRSYPIAGWGRQKSIPGRGRNGPIPGVEVG-ISSHLDALRVQELLCSMGRVLGDTG 487
             +EAC L+GDGSEPRWPRWTK+ VDGPLL+AE  AS  T+V  +CAGWRFP VRLVR SEESALFDFEVRFR AS   GE GLL C+  LRDEI+ED+PPEVLLQRPG+ G L +LLR PSASE+++EE LS A RLLERLV SARLH D +FLPPS   ++D                    GG              P   +P    A     +A+ G  + RH       GG    D     PG                             X                +AAVATLLSFRYP+SS      A  AA                                      A  ST GGE           G+GG+SVCGAL+ALFLS CPLLGY           +R T  +G      GE  G  PA  +  V          PSRV+VL GE+LQA+IP+LLEPR      WG        G  G   G   G I+  +DALRVQE+LCS G+VLGDTG
Sbjct:  311 TEEACALFGDGSEPRWPRWTKDFVDGPLLSAENNASSDTVVACLCAGWRFPHVRLVR-SEESALFDFEVRFRTASTPAGETGLLRCLRHLRDEIVEDYPPEVLLQRPGSFGRLLSLLRTPSASERVIEEVLSTASRLLERLVRSARLHQDASFLPPSPSASVD---IDDQRAPAAGESDGYSFGGG-------------PAGYVPGGGGAVGD--SAVFGTRYGRH-------GGNEPTDTDSGWPGFRGDEDENHXXXXXXXXXXXXXXXXXXXXXARVPQDHRMRTTTTPGDAAVATLLSFRYPRSSPTVRFTAGGAASTASDGGLGERRG-------------------------AAPSTGGGEVPGEFGKAEPGGSGGLSVCGALFALFLSACPLLGY------PAADNARVTFASGGGRVSHGEEEGRRPASELSGV----------PSRVAVLAGEVLQAVIPYLLEPRGDD-GDWGESTDSASAGGVG---GAAAGMITCPVDALRVQEVLCSTGQVLGDTG 768          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig952.17262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G379_ECTSI2.170e-12441.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNE1_9PHAE1.540e-8242.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig952contigS-latissima_F_contig952:61084..77222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig952.17262.1mRNA_S-latissima_F_contig952.17262.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig952 57205..102353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig952.17262.1 ID=prot_S-latissima_F_contig952.17262.1|Name=mRNA_S-latissima_F_contig952.17262.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=912bp
MVPVKEACLLYGDGSEPRWPRWTKELVDGPLLAAEGASPATLVVSVCAGW
RFPPVRLVRRSEESALFDFEVRFRAASLGEAGLLGCIERLRDEIMEDFPP
EVLLQRPGAVGHLAALLRAPSASEKILEESLSAAKRLLERLVSSARLHFD
DAFLPPSKPDNLDGSGGGGGSWGGGGGGGGGRDGGWDAPRSLPLPPPRMP
FSSLPSAASASSSAAAAIGGQEFPRHAILGEDEGGRRGLDHHRFAPGGGG
GGEGGQGVGVGVGPGEAAVATLLSFRYPQSSGRASIKASAAAVAAAAAAS
AASARGDRGGRGGEGGGWGIGGGAGGGEGRAECSTDGGEGAGGISVCGAL
YALFLSVCPLLGYGGGGGGGGGGSSRGTIDAGAAATVVGEGWSPAVLMGA
VAAAGSGPQMRPSRVSVLTGELLQAIIPFLLEPRSYPIAGWGRQKSIPGR
GRNGPIPGVEVGISSHLDALRVQELLCSMGRVLGDTGEGVPSPAAAIALQ
LIFAILPSDVGSEDNEDDFATSPPAIVLPPELIALLRGLVLDPAVAESQP
WLRPRLMPYVARADPCGARLFQSVQDLVADATSVLLTVEGVESGGKEEGD
EGLAEGGPAWGWAEGQLRQVERALPLLRTVDDARVVGAALALWAAAAQTS
FSWKSGARGGSSAFSAQRAGAKVVARLLQGEFGEKARSQALWMLEGLTGP
GPAGAGRGCLAVPPRLAVAMARRGFSDPLLPPSAVMRGAVAVAVILGGGI
GDGDLRDAGIGGIRSVYCDGSGRRNGAGNGNGNGIGDDSGNGSGDRNGDG
GGGGVFGGGGDGGGARVCGVSTAANSGDDDNGGDCKQRSMTARPSAHSPP
LFGEPTPSSGPCPTSTSSSPPSSSASPRGRHGFAGGHHVCGRARGVAAGE
GNAARRIIGWS*
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