prot_S-latissima_F_contig952.17261.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig952.17261.1
Unique Nameprot_S-latissima_F_contig952.17261.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length188
Homology
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: A0A6H5JR39_9PHAE (ATP-dependent DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR39_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.930e-79
Identity = 135/168 (80.36%), Postives = 149/168 (88.69%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERAL-GGQAKGVTAVPRQGQAAP 167
            VGAKVLLLKNLDSS+QLVNGATGVV EFVEASGRRLP VEFD +EG GKVV++I EEEWTVS+GDRE ARRVQLPLRLAWALSVHKSQGMTIA+VMVST+GMFE+GQAYVALSRATTLDGL L++F  GVV+AH+ VK FYAGLE RA  GG + GVT  PRQG+A P
Sbjct:  516 VGAKVLLLKNLDSSSQLVNGATGVVKEFVEASGRRLPMVEFDTIEGGGKVVSVISEEEWTVSLGDREMARRVQLPLRLAWALSVHKSQGMTIAHVMVSTRGMFEFGQAYVALSRATTLDGLHLVEFQKGVVKAHESVKKFYAGLERRAAHGGSSSGVTTAPRQGKAVP 683          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: UPI001CFE16C6 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFE16C6)

HSP 1 Score: 133 bits (334), Expect = 1.340e-35
Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEER 147
            +GA+V+L+KNL  S  LVNGA GVV  F EA GR LP+V+F        V  ++R E WTV     +   R QLPLRLAWALS+HKSQGMT+  V +S   +FE GQAYVALSRA +L GL +LDF   VVR   +V  FYA L ++
Sbjct:   79 LGAQVMLVKNLAVSQGLVNGARGVVVGF-EADGRGLPRVKFLC-----GVTEVVRTERWTVHGPGGQLLSRQQLPLRLAWALSIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLQGLRVLDFDPNVVRCDPRVLKFYASLRKQ 219          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: A0A7S0GKD4_9STRA (ATP-dependent DNA helicase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKD4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 6.440e-33
Identity = 76/171 (44.44%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRR-----------LPKVEFDAMEGSGK---------------VVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLE 145
            VGA+V+LLKN+D    LVNG+ GVV  F +   +            LP V+F ++    K               ++ ++   EWT  +GD   + R Q+PLRLAWA+SVHKSQGMTI N+ V+ +G+FEYGQ+YVALSRATTL  L+L  F     RAH KVK FY  +E
Sbjct:   81 VGAQVMLLKNIDPEKGLVNGSRGVVVGFKKHPNKSNDMPREFKSLDLPYVQFKSVNDDQKCHGDDDSANSTKKDDLLVLVEPSEWTNRIGDSTVSSRTQIPLRLAWAMSVHKSQGMTIPNLSVNLKGVFEYGQSYVALSRATTLSLLKLHGFDERSFRAHPKVKRFYQLME 251          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: F7ET02_MONDO (ATP-dependent DNA helicase PIF1 n=7 Tax=Metatheria TaxID=9263 RepID=F7ET02_MONDO)

HSP 1 Score: 133 bits (334), Expect = 8.220e-33
Identity = 79/148 (53.38%), Postives = 96/148 (64.86%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERA 148
            +GA+V+L+KNL  S  LVNGA GVV  F EA GR LP V+F        V  ++R E WTV     +   R QLPLRLAWALS+HKSQGMT+  V +S   +FE GQAYVALSRA +L GL +LDF   VVR   +V  FYA L ++A
Sbjct:  474 LGAQVMLVKNLAVSQGLVNGARGVVVGF-EADGRGLPTVKFLC-----GVTEVVRTERWTVHGPGGQLLSRQQLPLRLAWALSIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLQGLRVLDFDPNVVRCDPRVLKFYASLRKQA 615          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: L8HDS3_ACACA (ATP-dependent DNA helicase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDS3_ACACA)

HSP 1 Score: 131 bits (330), Expect = 4.580e-32
Identity = 76/157 (48.41%), Postives = 100/157 (63.69%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEAS--------GRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERAL 149
            VGA+V+LLKNLD  N+LVNGA G+V EF +           +   K E+  +  +     I+  E+++V VG   KA R Q+PL LAWALS+HKSQGMTI+ V +    +FEYGQAYVALSRAT+L+GL LL F+   ++AH +V  FY  L  R L
Sbjct:  543 VGAQVILLKNLDFENELVNGARGLVVEFRKPDRSEREKERDKAFAKQEYPDVLFANGHRRILTPEQFSVEVGGSVKASRKQVPLGLAWALSIHKSQGMTISKVELHLGNVFEYGQAYVALSRATSLEGLRLLSFNPAGIKAHPRVLQFYQSLLGRPL 699          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: K0S5E8_THAOC (ATP-dependent DNA helicase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5E8_THAOC)

HSP 1 Score: 130 bits (326), Expect = 1.300e-31
Identity = 81/176 (46.02%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRR----------LPKVEFDAMEGSGK-----------VVT------IIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERAL 149
            VGA+V+LLKN+D    L NG+ GVV  F                  P V F +++  GK           VV+      +I  EEW+  +GD+  + RVQ+PLRLAW++SVHKSQGMTI N+ V+ QG+FEYGQAYVALSRAT L  L L  F+    RAH KVK FY  LE   L
Sbjct:  418 VGAQVMLLKNIDLDRGLANGSRGVVVRFQRPKSESEIPTGFKKMDFPVVRFISVKPVGKDKCDDESSSASVVSESDNEFVIHPEEWSNKMGDQTISSRVQIPLRLAWSISVHKSQGMTIPNLTVNLQGVFEYGQAYVALSRATELKLLTLRGFNERCFRAHPKVKTFYKLLESGGL 593          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: UPI000E777DBA (ATP-dependent DNA helicase PIF1 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=UPI000E777DBA)

HSP 1 Score: 127 bits (319), Expect = 2.490e-31
Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 0
Query:    2 GAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERALGGQA 153
            GA+V+L KNLD S  LVNGA GVV EF E  G+ LP+V F        V  +IR E W           R QLPL+LAWA+S+HKSQGM++  V +S   +FE GQAYVALSRA +L+GL +LDF   VVRA+  V  FY  L++  L  QA
Sbjct:  297 GAQVILTKNLDVSRGLVNGARGVVVEF-ETEGKGLPRVRFLC-----GVTEVIRLERWVFKGPSGIYLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLEGLRVLDFDPNVVRANPYVLQFYNHLQKEQLLSQA 442          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: A0A7S0LAK3_9EUKA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAK3_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 2.740e-31
Identity = 62/114 (54.39%), Postives = 83/114 (72.81%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSR 114
            +GA+VLLLKN+D +  LVNG+ GVV +F ++    LP V F+A+  S  V  +I  EEW+V +G ++ ARR Q+PLRLAWA+S+HKSQGMTI  + +    +FEYGQAYVALSR
Sbjct:   20 LGAQVLLLKNIDVAKGLVNGSRGVVVDFEKS----LPVVTFEAVSTSASVTRLIGREEWSVEIGGKKVARRRQVPLRLAWAISIHKSQGMTIDFLEMDLGSVFEYGQAYVALSR 129          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: A0A7S4IM27_9EUKA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IM27_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 5.090e-31
Identity = 73/150 (48.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query:    2 GAKVLLLKNLDSSNQLVNGATGVVTEFV---EASGRRLP--KVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEE 146
            G +V+LLKNLD  N LVNG+ G+V  F    E  G   P   V++  +  S     II  + W + +  + KA R Q+PL LA+ALS+HKSQGM+I  V +S   +F YGQAYVALSRAT+L+GL L +FS  VVRAH KV  FY   +E
Sbjct:  112 GCQVMLLKNLDFKNSLVNGSRGIVVSFTTDPEQIGVHDPFADVQYPVVRFSNGSDHIIVHDTWRIELAGQIKASRYQIPLTLAYALSIHKSQGMSIEKVDLSLSKVFTYGQAYVALSRATSLEGLRLANFSPQVVRAHPKVIQFYNSFKE 261          
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Match: UPI0020151D43 (ATP-dependent DNA helicase PIF1 isoform X1 n=6 Tax=Alosa TaxID=34772 RepID=UPI0020151D43)

HSP 1 Score: 128 bits (321), Expect = 5.750e-31
Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 0
Query:    1 VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKVVTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQGMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERAL 149
            VGA+V+L KNLD    LVNGA GVV +F +   + LP+V F        V  +IR E W +     +   R+QLPL+LAWA+S+HKSQGMT+  V +S   +FE GQAYVALSRA +L+GL +LDF+  VV+A+Q V  FY  + +  L
Sbjct:  515 VGAQVMLTKNLDVQRGLVNGARGVVLDF-QPGNQGLPRVHFLC-----GVTEVIRRERWVLKANGGQFISRLQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVLDFNPHVVKANQDVLAFYNKMRKERL 657          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig952.17261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR39_9PHAE3.930e-7980.36ATP-dependent DNA helicase n=2 Tax=Ectocarpus TaxI... [more]
UPI001CFE16C61.340e-3553.06ATP-dependent DNA helicase PIF1-like n=1 Tax=Graci... [more]
A0A7S0GKD4_9STRA6.440e-3344.44ATP-dependent DNA helicase n=1 Tax=Proboscia inerm... [more]
F7ET02_MONDO8.220e-3353.38ATP-dependent DNA helicase PIF1 n=7 Tax=Metatheria... [more]
L8HDS3_ACACA4.580e-3248.41ATP-dependent DNA helicase n=1 Tax=Acanthamoeba ca... [more]
K0S5E8_THAOC1.300e-3146.02ATP-dependent DNA helicase n=1 Tax=Thalassiosira o... [more]
UPI000E777DBA2.490e-3150.66ATP-dependent DNA helicase PIF1 n=1 Tax=Terrapene ... [more]
A0A7S0LAK3_9EUKA2.740e-3154.39ATP-dependent DNA helicase (Fragment) n=1 Tax=Cocc... [more]
A0A7S4IM27_9EUKA5.090e-3148.67ATP-dependent DNA helicase (Fragment) n=1 Tax=Vann... [more]
UPI0020151D435.750e-3148.32ATP-dependent DNA helicase PIF1 isoform X1 n=6 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.940coord: 1..79
e-value: 2.3E-9
score: 38.4
NoneNo IPR availableGENE3D3.40.50.300coord: 80..117
e-value: 2.3E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR23274:SF11ATP-DEPENDENT DNA HELICASE PIF1coord: 1..148
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 1..148
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig952contigS-latissima_F_contig952:14767..22626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig952.17261.1mRNA_S-latissima_F_contig952.17261.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig952 14767..22626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig952.17261.1 ID=prot_S-latissima_F_contig952.17261.1|Name=mRNA_S-latissima_F_contig952.17261.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=188bp
VGAKVLLLKNLDSSNQLVNGATGVVTEFVEASGRRLPKVEFDAMEGSGKV
VTIIREEEWTVSVGDREKARRVQLPLRLAWALSVHKSQGMTIANVMVSTQ
GMFEYGQAYVALSRATTLDGLELLDFSVGVVRAHQKVKVFYAGLEERALG
GQAKGVTAVPRQGQAAPKPGGWISRSSQHPNSASDASS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase