prot_S-latissima_F_contig950.17248.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig950.17248.1
Unique Nameprot_S-latissima_F_contig950.17248.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length108
Homology
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BLAST of mRNA_S-latissima_F_contig950.17248.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 4.080e-30
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0 
Query:   20 FVEWSRSTEELQSVPALESVDLPGHKDFTEGCLKLLSAPGAAFSPKRNPGDLTEREEARMAYAIGDGIYTVARLSAHLDALLAGLPTE 107
            F+EWS  T ELQ VP LE+VD+PG + FTEGCLKLLSA  AA   ++ P  LT REEARMAYAIG G+YT+ RLSAHLDAL AGLPTE
Sbjct: 1201 FIEWSHRTGELQEVPPLETVDMPGERAFTEGCLKLLSAHAAAVL-RKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDALRAGLPTE 1287
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BLAST of mRNA_S-latissima_F_contig950.17248.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.290e-23
Identity = 58/119 (48.74%), Postives = 67/119 (56.30%), Query Frame = 0 
Query:   20 FVEWSRSTEELQSVPALESVDLPGHKDFTEGCLK-------------------------LLSAPGAAFSP------KRNPGDLTEREEARMAYAIGDGIYTVARLSAHLDALLAGLPTE 107
            F+EWS  T ELQ +P LE+VD+PG + FTEGCLK                         +LSAP    S       ++ P  LT REE RMAYAIG G YT+ RLSAHLDAL AGLPTE
Sbjct: 1388 FIEWSHRTGELQELPPLETVDMPGERAFTEGCLKTKHASQPVALGVHPSVFLIASAFLPVLSAPSQLLSAHAAAVLRKEPEQLTAREEVRMAYAIGGGTYTIERLSAHLDALGAGLPTE 1506
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig950.17248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK06_ECTSI4.080e-3069.32CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAS6_9PHAE2.290e-2348.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig950contigS-latissima_F_contig950:7488..8987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig950.17248.1mRNA_S-latissima_F_contig950.17248.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig950 7488..9004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig950.17248.1 ID=prot_S-latissima_F_contig950.17248.1|Name=mRNA_S-latissima_F_contig950.17248.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=108bp
GQETRVAAAAAAAVAAKEKFVEWSRSTEELQSVPALESVDLPGHKDFTEG
CLKLLSAPGAAFSPKRNPGDLTEREEARMAYAIGDGIYTVARLSAHLDAL
LAGLPTE*
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