prot_S-latissima_F_contig95.17245.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig95.17245.1
Unique Nameprot_S-latissima_F_contig95.17245.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length89
Homology
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.880e-59
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDV 88
            MAADRFNMNRSWDHIQNKY+GTGHSDTTKFEWATNQHRDSIASHIGHSDLL YFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD+
Sbjct:   35 MAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDI 122          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.980e-47
Identity = 64/85 (75.29%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDD 85
            MAADRFN+NR W+H+Q+KY+GTGH+DT+KFEWA NQHRD++ASHIGHSD+L YFAVAEN ++GRVR+ +LEKMLQPCGPPP K D
Sbjct:    1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.140e-46
Identity = 63/86 (73.26%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            MAADRFN+NR W+H+Q KY+GTGH+DT+KFEWA NQHRD++ASHIGH D+L YFAVAEN ++GRVRY +LEKM+QPCGPPP K++D
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.350e-46
Identity = 64/85 (75.29%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    2 AADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            AADRFN+NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L +FAVAEN A+GRVRY +LEKMLQPCGPPP K++D
Sbjct:   53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 152 bits (384), Expect = 1.670e-46
Identity = 63/85 (74.12%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    2 AADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            AADRFN+NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LEKMLQPCGPPP K+++
Sbjct:    3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 152 bits (383), Expect = 2.310e-46
Identity = 63/86 (73.26%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            MAADRFN+NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GH D+L+YFA AEN AVGRV++ +LEKMLQPCGPPP K+D+
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: W7TXH4_9STRA (Splicing factor subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXH4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.590e-46
Identity = 68/88 (77.27%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPA-KDDDD 87
            MAADRFN+NRSW+H+QNKY+GTGH D TK EW TNQHRD+ A+H+GH D L Y AVA+N+AVGRVRYQLLEKMLQPCGPPPA KDD+D
Sbjct:    1 MAADRFNINRSWEHLQNKYVGTGHPDLTKHEWLTNQHRDTYATHLGHHDQLAYIAVAQNDAVGRVRYQLLEKMLQPCGPPPAAKDDED 88          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: A0A835ZDN9_9STRA (Splicing factor subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.590e-46
Identity = 64/87 (73.56%), Postives = 79/87 (90.80%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 87
            MAADRFN N+SWDHIQ K++GTGH DT+KFEWATNQHRD+IAS++GHSD++ Y++VA+N + GRVRY L+EKMLQPCGPPP KDD+D
Sbjct:    1 MAADRFNFNKSWDHIQAKFVGTGHGDTSKFEWATNQHRDTIASNVGHSDIIDYYSVAQNLSQGRVRYNLMEKMLQPCGPPPPKDDED 87          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.080e-46
Identity = 63/85 (74.12%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    2 AADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            AADRFN+NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LEKMLQPCGPPP K+++
Sbjct:   45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129          
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 9.410e-46
Identity = 62/86 (72.09%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 86
            MAADRFN+NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASHIGH+D+L YFAVAEN ++ RVRY +LE+MLQPCGPPP K+++
Sbjct:    1 MAADRFNVNRQWEHLQAKYVGTGHADTTKFEWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLERMLQPCGPPPQKEEE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig95.17245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI1.880e-5996.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0XHV2_9STRA3.980e-4775.29Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
A0A1W0A9Q9_9STRA1.140e-4673.26Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
A0A662XDD1_9STRA1.350e-4675.29Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3G531_PHYRM1.670e-4674.12Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
K3WSC6_GLOUD2.310e-4673.26Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]
W7TXH4_9STRA3.590e-4677.27Splicing factor subunit n=2 Tax=Monodopsidaceae Ta... [more]
A0A835ZDN9_9STRA3.590e-4673.56Splicing factor subunit n=1 Tax=Tribonema minus Ta... [more]
A0A8J5IQX8_9STRA6.080e-4674.12Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
F0W9E9_9STRA9.410e-4672.09Splicing factor subunit n=2 Tax=Albugo TaxID=65356... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017089Splicing factor 3B, subunit 5PIRSFPIRSF037010SF3B5coord: 1..87
e-value: 7.6E-36
score: 120.0
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 4..81
e-value: 1.2E-37
score: 127.9
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978FAMILY NOT NAMEDcoord: 3..85
NoneNo IPR availablePANTHERPTHR20978:SF0SPLICING FACTOR 3B SUBUNIT 5coord: 3..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig95contigS-latissima_F_contig95:556802..561509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig95.17245.1mRNA_S-latissima_F_contig95.17245.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig95 556336..561578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig95.17245.1 ID=prot_S-latissima_F_contig95.17245.1|Name=mRNA_S-latissima_F_contig95.17245.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=89bp
MAADRFNMNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDL
LTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017089Splicing_factor_3B_subunit_5
IPR009846SF3b5/RDS3-10