prot_S-latissima_F_contig95.17222.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig95.17222.1
Unique Nameprot_S-latissima_F_contig95.17222.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length210
Homology
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.970e-34
Identity = 92/220 (41.82%), Postives = 116/220 (52.73%), Query Frame = 0
Query:    1 MLDDVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGDGLYAVSS-----------DSRPNV-------RLSWRRHQPSPTRWPSVGPRRNRGRRSSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            MLD++HHPS++HK + DF  H++ SV S SC +CDR C+ +DC+ VAA DLP+KD+L+A D L A S+           DS P +       RL +    P               R     E +  LL++       A G+        L         VEM AAS VRI+G       LK G V GSAKS MRGTFTFY QDAYGVQL+LPACD D+A
Sbjct:  195 MLDNIHHPSVLHKCLSDFTNHIVNSVRSTSCGICDRNCKSMDCKLVAAKDLPHKDLLKADDKLLACSAVRGTFFNYPGDDSVPKLLDGLVLERLGFESTSPY--------------RMQVCKECLQSLLKKRIPEAALANGLWLGDFPEHL----RSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIA 396          
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.660e-28
Identity = 88/208 (42.31%), Postives = 109/208 (52.40%), Query Frame = 0
Query:    1 MLDDVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGDGLY--AVSSDSRPNVRLSWRR----HQPSPTRWPSVGPRRNRGRRSSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            +LDD+HHPS+MHK + DF   M+ S+   SC VCDR CR++ C+ VA  DLP+K +L A + L   A   D   N     R     H  +   +    P   R       E +  LL+        A G+         P        VEM AAS VRI+G       LKVG V GSAKS+MRGTFTFY QDAYGVQL+LPACD D+A
Sbjct:   81 LLDDIHHPSVMHKCLADFDTFMVNSIRRTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLR----VCQECLNSLLKDKMPEAALANGLWLGD----FPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIA 280          
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.180e-28
Identity = 88/222 (39.64%), Postives = 116/222 (52.25%), Query Frame = 0
Query:    1 MLDDVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGDGL------------YAVSSDSR-----PNVRLSWRRHQPSPTRWPSVGPR---RNRGRRSSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            MLDD+ HPS +HK +HDF   M+ S+ S SC VCD L RE+D   +AA DL + D+L+A D +            Y    DS+        RL +    P   R  +   R   RNR   ++ A G++ L E P   ++A+                     VE+ AAS VR++G       LKVG + GSAKS+MR TFTFY QDAYGVQL+LPACD D+A
Sbjct:  161 MLDDILHPSRVHKCIHDFCTFMVNSIESTSCAVCDVLHREIDINLIAATDLRHADLLKASDKMLGCAGVRDRFFGYPGGDDSKCLDGLVLERLGFEADPPHRLRVCAECFRDLSRNRMPEAALANGLW-LGEFPEHLRSAS--------------------FVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIA 361          
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 9.800e-23
Identity = 81/209 (38.76%), Postives = 105/209 (50.24%), Query Frame = 0
Query:    4 DVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGDGLYAVSSDSRPNVRLSWRRHQPSPTRWPSVGPRRNRGRRSSS--------AEGVYGLLERPAQGQNAAGG--VGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            DV   SM+ K + DF  +M  ++ S SC VCD +CR +DC+WV+A +LPN+ +L AG  L A   DS  N    +    P  T     G    R    S         +E +  L          A G  VG+       P        VEMAAAS VR +G      +LKVG +PGSA  +MRGTFTF+FQ+AYGV+  LP CD D+A
Sbjct: 2202 DVLGTSMLFKCIADFHTYMADNIHSVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKA--HDSIMNDMKDY----PGDTNKCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGD------FPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIA 2398          
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.040e-17
Identity = 76/192 (39.58%), Postives = 92/192 (47.92%), Query Frame = 0
Query:   17 DFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGDGLY--AVSSDSRPNVRLSWRR----HQPSPTRWPSVGPRRNRGRRSSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            DF    +      SC VCDR CR++ C+ VA  DLP+K +L A + L   A   D   N     R     H  +   +    P   R       E +  LL+        A G+         P        VEM AAS VRI+G       LKVG V GSAKS+MRGTFTFY QDAYGVQL+LPACD D+A
Sbjct:   17 DFGPGTLFRGEKTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLR----VCQECLNSLLKDKMPEAALANGLWLGD----FPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIA 200          
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 8.630e-11
Identity = 64/218 (29.36%), Postives = 91/218 (41.74%), Query Frame = 0
Query:    1 MLDDVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAIDLPNKDILRAGD-----GLYAVSSDSRPNVRLS-----------WRRHQPSPTRWPSVGPRRNRGRRSSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASAVRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRDVA 202
            ++D V HP    K +     H++ S  S S  V D  C + DC WV A +L NKD+L          ++  S  + P  +             +   +P   R  S   +  R  +       YG +            +G+       P      + VEM AA+ VR++G        K+  + GSAKS+MRGTFTFY Q+ Y V   LPAC  DVA
Sbjct:  151 LVDGVLHPPYCTKVL---VAHIVDSSLSVSRAVYDLFCTKTDCVWVKAEELQNKDLLTPNKILTECAMFKPSFINYPGDKAKVLDGLVLALEDFEAGEPHRLRVCSTCLKDMRKNKMGRQRKYYGFM------------LGD------FPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVA 347          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig95.17222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3U9_ECTSI2.970e-3441.82ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5L0L4_9PHAE1.660e-2842.31Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KIB1_9PHAE3.180e-2839.64ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KTA2_9PHAE9.800e-2338.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8N9_9PHAE1.040e-1739.58Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5JN07_9PHAE8.630e-1129.36ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig95contigS-latissima_F_contig95:19511..20635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig95.17222.1mRNA_S-latissima_F_contig95.17222.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig95 18757..20721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig95.17222.1 ID=prot_S-latissima_F_contig95.17222.1|Name=mRNA_S-latissima_F_contig95.17222.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=210bp
MLDDVHHPSMMHKTVHDFARHMIGSVTSASCTVCDRLCREVDCQWVAAID
LPNKDILRAGDGLYAVSSDSRPNVRLSWRRHQPSPTRWPSVGPRRNRGRR
SSSAEGVYGLLERPAQGQNAAGGVGERSVARRLPPTPAQRDIVEMAAASA
VRINGHGRCPRRLKVGCVPGSAKSVMRGTFTFYFQDAYGVQLQLPACDRD
VADPSRVLS*
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