prot_S-latissima_F_contig949.17218.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig949.17218.1
Unique Nameprot_S-latissima_F_contig949.17218.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length491
Homology
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: D8LBW9_ECTSI (Novel cap binding protein nCBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW9_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 1.050e-174
Identity = 332/513 (64.72%), Postives = 364/513 (70.96%), Query Frame = 0
Query:   18 GHMHSSVDP----LHSNNNGSVLAPVDGGGGNDSSGPAFESLYNEPEDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNLGAVNGRGD-GAGGFPAQSPGFGPRGGPPGAGGAWTRNR--GGPRGLGASGXXXXXXXXXKDGDRA-PLASGNMPAETWAKGPPEARDRERDTGGFRGGGAGGMGGFRPPPGRWAERRAXXXXXXXXXXXXM------------------KDFGR-DRGDREKDLEKWGKVRKD-TTVRDRER-----DANFRDR-EFRERET-ERDWGRLRRTGPXXXXXXXXXXXXXXXXXXXXXXXPPGS-----LAALERASAVPGEEGKGRDWAKLRHTTQAPPSSGASPDREKR 490
            GH+HSS++P                   G  + +SGPA+ESLYNEPED TG  QTLIQNRYCFWYYRKGAQKES+DPSEAYESGIKVV+SFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWED+SN+RGGQLL+RLKKGLASRAWE+LVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWN+SASNTEGIEKIR++VKR+L+IP FVQVEYRRHQDNLGA + R + G GGFPA SPGFGPRGGPPG  GAWTR+   GGPRG+G  G         KDG+RA P A G MP ETWA+GPPEARDR+RD GGFRG                     XXXXXXXXXX                     K FGR DR DREKDLEKWGKVRKD T+ RD        D  FRDR EFR+R+T +RDWGRLRR GP            XXXXXXXXXXX         L  LER S++  +EGKGRDW KLRHTT A      SPD +KR
Sbjct:   40 GHLHSSLEPPAGXXXXXXXXXXXXXATDGLADSASGPAYESLYNEPEDLTGTRQTLIQNRYCFWYYRKGAQKESKDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDASNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIEKIRDTVKRLLQIPSFVQVEYRRHQDNLGAASVREERGGGGFPAASPGFGPRGGPPG--GAWTRHGRGGGPRGMGDRGDDHHH----KDGERAAPAAGGGMPQETWARGPPEARDRDRDAGGFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKDYXXXXXXXXXXXXXXXXKGFGRGDRVDREKDLEKWGKVRKDPTSHRDXXXXXXXGDPTFRDRAEFRDRDTTDRDWGRLRRPGPPPGVGGGLRGIGXXXXXXXXXXXXXXXXXXXXLQRLERQSSL--DEGKGRDWGKLRHTTPA------SPDGDKR 538          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A835Z354_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z354_9STRA)

HSP 1 Score: 263 bits (671), Expect = 4.850e-82
Identity = 126/192 (65.62%), Postives = 153/192 (79.69%), Query Frame = 0
Query:   55 LYNEPEDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNLGAVNGRGDG 246
            LY+ PEDTTG  QT IQNRYCFWY +KG ++ +   +E YES IK + SFQTVEHFWRIYNH+ R DQVP  TD HLF+DGIKP WEDS NARGG  ++RLKKGLASR  + L+LA+IGEQFDVGNEICGAV+SVRYSEDV+ VWN++A N E  +KIR+ ++RILK+P FVQ+EYRRHQD++  + G   G
Sbjct:   11 LYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLT---TEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQG 197          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A7S2B9L2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9L2_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.940e-69
Identity = 100/183 (54.64%), Postives = 143/183 (78.14%), Query Frame = 0
Query:   55 LYNEPEDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            L +EPED   E QT IQNRY FW+ ++  Q +S   ++ +++ ++ + SFQTV+HFWR+Y+H+ RA  +P  TD HLF+DGIKPTWED SN +GG+ ++RL+KGLA+R WE L+L I+GEQFDVGNE+CGAV+S+RY+ED+IS+WN++A NTE   KIR+ ++R+L++P F+  EY+RH D L
Sbjct:   18 LVDEPEDL--EKQTAIQNRYVFWFMQR--QSKSAVGNDNFDANLQQIASFQTVQHFWRVYDHVQRATSLPQMTDFHLFKDGIKPTWEDPSNKQGGKWIIRLRKGLAARYWEELLLGIVGEQFDVGNEVCGAVLSIRYNEDIISIWNRNADNTEATSKIRDHMRRLLRLPAFISTEYKRHADAL 196          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A6G0XTE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.090e-66
Identity = 96/173 (55.49%), Postives = 137/173 (79.19%), Query Frame = 0
Query:   65 EHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            E +  IQN YCFWY +K + K + D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ ++R++KG+ASR WE+LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++++L +P FV +EY+RH  +L
Sbjct:   17 EGEAPIQNTYCFWYMKKNSGK-TLDDQESYEKSIKEIGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKSGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 188          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: W4FZB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZB5_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.370e-66
Identity = 98/179 (54.75%), Postives = 139/179 (77.65%), Query Frame = 0
Query:   59 PEDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            P DT GE    IQN Y FWY +K + K   D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ ++R++KG+ASR WE+LVLAI+GEQFDVGNEICGAV+S+RY+ED+IS+WN++A N+E   +IR++++++L +P FV +EY+RH  +L
Sbjct:   11 PVDTAGE--VPIQNTYTFWYMKKNSGKALED-QESYEKSIKEISEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDTANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNSEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 186          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A024TVS7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVS7_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.440e-66
Identity = 98/177 (55.37%), Postives = 137/177 (77.40%), Query Frame = 0
Query:   61 DTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            D TGE  + IQN Y FWY +K + K   D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WEDS+N RGG+ ++R++KG+ASR WE+LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++++L +P F  +EY+RH  +L
Sbjct:   12 DATGE--SPIQNTYTFWYMKKNSGKALED-QESYEKSIKEIAEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDSANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFASLEYKRHDTSL 185          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A1V9Z309_9STRA (Eukaryotic initiation factor 4E n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z309_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.140e-65
Identity = 93/172 (54.07%), Postives = 136/172 (79.07%), Query Frame = 0
Query:   67 QTLIQNRYCFWYYRKGAQ-KESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            +T +QN YCFWY +K    K + D  E+YE  IK +  F+TV+ FWR+Y+H++R + +PN TD HLF+ GIKP WED++N RGG+ ++R++KG++SR WE+LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++++L +P FV +EY+RH  +L
Sbjct:    4 ETALQNAYCFWYMKKNTGGKAALDDQESYEKSIKELGEFKTVQGFWRLYDHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGISSRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVVLEYKRHDTSL 175          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: F0W0Q3_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Q3_9STRA)

HSP 1 Score: 220 bits (561), Expect = 8.680e-65
Identity = 96/178 (53.93%), Postives = 135/178 (75.84%), Query Frame = 0
Query:   60 EDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            +DTTG+    IQN Y FWY ++    ++    E+YE  IK +  F+TV+ FW IYNH++R + +PN  D HLF+ GIKP WED SN RGG+ +VR++KG+ASR WE+L+LAIIGEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++R+L +P FV +EY+RH  +L
Sbjct:   16 DDTTGKSDAPIQNMYTFWYMKRNTANKA----ESYEKSIKELGDFKTVQGFWCIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDPSNRRGGKWMVRMRKGIASRYWEDLILAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRRVLNLPQFVALEYKRHDASL 189          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: A0A485LDV3_9STRA (Aste57867_20004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDV3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.490e-64
Identity = 93/171 (54.39%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   67 QTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            ++ IQN YCFWY +K + K     +E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ ++R++KG+ASR WE+LVLAI+GEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++++L +P FV +EY+RH  +L
Sbjct:   19 ESPIQNTYCFWYMKKNSGK-----TESYEKSIKELGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 184          
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Match: D0MYJ6_PHYIT (Eukaryotic initiation factor 4E, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYJ6_PHYIT)

HSP 1 Score: 219 bits (558), Expect = 1.530e-64
Identity = 96/174 (55.17%), Postives = 135/174 (77.59%), Query Frame = 0
Query:   64 GEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKVVESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQLLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNKSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNL 237
            G  +T IQN Y FWY ++    ++   SE+YE  IK +  F+TV+ FW+IYNH++R + +PN  D HLF+ GIKP WEDS+N RGG+ +VRL+KG+ASR WE+LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WN++A N E   +IR++++++L +P FV +EY+RH  +L
Sbjct:   18 GTTETPIQNMYTFWYIKRSTGNKA--VSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig949.17218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBW9_ECTSI1.050e-17464.72Novel cap binding protein nCBP n=2 Tax=Ectocarpus ... [more]
A0A835Z354_9STRA4.850e-8265.63Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
A0A7S2B9L2_9STRA2.940e-6954.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6G0XTE8_9STRA1.090e-6655.49Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FZB5_9STRA1.370e-6654.75Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024TVS7_9STRA5.440e-6655.37Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9Z309_9STRA4.140e-6554.07Eukaryotic initiation factor 4E n=1 Tax=Achlya hyp... [more]
F0W0Q3_9STRA8.680e-6553.93Eukaryotic initiation factor 4E putative n=1 Tax=A... [more]
A0A485LDV3_9STRA1.490e-6454.39Aste57867_20004 protein n=1 Tax=Aphanomyces stella... [more]
D0MYJ6_PHYIT1.530e-6455.17Eukaryotic initiation factor 4E, putative n=11 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 70..230
e-value: 3.2E-51
score: 173.3
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 62..237
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 67..240
e-value: 3.5E-58
score: 198.0
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 65..239
NoneNo IPR availablePANTHERPTHR11960:SF28EIF4E-HOMOLOGOUS PROTEIN, ISOFORM Bcoord: 62..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig949contigS-latissima_F_contig949:112106..130474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig949.17218.1mRNA_S-latissima_F_contig949.17218.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig949 111995..130682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig949.17218.1 ID=prot_S-latissima_F_contig949.17218.1|Name=mRNA_S-latissima_F_contig949.17218.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=491bp
MDMASSIVENNLLGSDEGHMHSSVDPLHSNNNGSVLAPVDGGGGNDSSGP
AFESLYNEPEDTTGEHQTLIQNRYCFWYYRKGAQKESRDPSEAYESGIKV
VESFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNARGGQ
LLVRLKKGLASRAWENLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWN
KSASNTEGIEKIRESVKRILKIPPFVQVEYRRHQDNLGAVNGRGDGAGGF
PAQSPGFGPRGGPPGAGGAWTRNRGGPRGLGASGGGGGGDDHHKDGDRAP
LASGNMPAETWAKGPPEARDRERDTGGFRGGGAGGMGGFRPPPGRWAERR
ADEGGGKDYGGGGMKDFGRDRGDREKDLEKWGKVRKDTTVRDRERDANFR
DREFRERETERDWGRLRRTGPPPGGLGGGGGMRGGGGDGGEHRRPPGSLA
ALERASAVPGEEGKGRDWAKLRHTTQAPPSSGASPDREKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like