prot_S-latissima_F_contig943.17181.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig943.17181.1
Unique Nameprot_S-latissima_F_contig943.17181.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length220
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig943.17181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 32..209
e-value: 2.4E-11
score: 45.1
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 42..157
e-value: 6.0E-8
score: 32.5
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 41..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig943contigS-latissima_F_contig943:64250..70035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig943.17181.1mRNA_S-latissima_F_contig943.17181.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig943 64250..70036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig943.17181.1 ID=prot_S-latissima_F_contig943.17181.1|Name=mRNA_S-latissima_F_contig943.17181.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=220bp
SGSSGTDGKSGSSGTDGKSGSPGGKGEDGSGETPPEEDSKRTGLKNSNVQ
CATNVSLQLLRSISVISNAVKNVVKKLVEPDKLNTPHPPREEKGTLASGI
GTLFQDMDEALDGGVCEVNDTVLGAINDSSYFTAGVQADAAELLGFFLSN
LGNGVGGTEGEGLQKAVEAVTGKMEIRYECACGRETQSPDEFLVLPVPMQ
KLPANVAAGGPGKGQGGKSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR038765Papain-like_cys_pep_sf