prot_S-latissima_F_contig941.17166.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig941.17166.1
Unique Nameprot_S-latissima_F_contig941.17166.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length326
Homology
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 7.310e-107
Identity = 191/326 (58.59%), Postives = 228/326 (69.94%), Query Frame = 0
Query:   11 WLEVTAPPASSVRGKEWRLVVET--CQVVAT----DGEKSLVGERDDQEGAI-VALEFELKEAEVDADDLQVLHSAHNLLEVFDVAKKRRS--GAGNFSPEKAVQLRKLVTSVKSDYTATAMGAHHSFRLQLGEAGRASQEALAASERKRHGRVEWWEVALRHMEDTANSRGFVKRAQSELLHEKAGQYGVTVRRSFPAFDSLPGLRMALAMKIKKRNSRRTGVLRKLASLTTEPGPMEIHTNSNCRRCRKDWGMTGPICGHCKIEDDIDLWEACVVYFRRPLRNTAGGAGGGTSSALVQDAGMLG-GDRESGPGINASHQGQTFK 326
            W EV  P   SVRG+EWR+VVET  C   A     DG +  VG R    G + VA+E EL+EAEVDAD LQ+LH+AHNLLEV D  K+R     AG   P +  +LR+LV  +K  Y ATA+G H S RLQL E+GRAS EAL A+ +KR G VEWWEVAL +ME T +   FV+RAQ ELLHEKAGQ+ V VRRSFP F S+ GLR AL++KIK+  ++R  VLRKL SLTT+PGPME+H+NSNCRRCR DWG TGPICGHCK+E+ ID WEACVVYFRRPL+NTA   G    S  +   G  G G   +GPG+N +HQG TFK
Sbjct: 1535 WQEVVVPSNRSVRGREWRIVVETSWCHEGAPRASGDGWRGGVGGR----GVVQVAMEVELREAEVDADSLQILHAAHNLLEVLDTVKERELLLPAGQAPPARTSELRQLVGRIKGGYVATAVGIHRSSRLQLQESGRASAEALRAAAKKRIGGVEWWEVALGYMESTRDEGNFVQRAQLELLHEKAGQHAVMVRRSFPNFTSIGGLRTALSIKIKEAQTKRKDVLRKLDSLTTDPGPMEVHSNSNCRRCRADWGKTGPICGHCKVEEHIDAWEACVVYFRRPLKNTADAGGSAAGSPFLSRFGPGGEGTNNAGPGVNNAHQGHTFK 1856          
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.040e-91
Identity = 163/274 (59.49%), Postives = 194/274 (70.80%), Query Frame = 0
Query:   66 AEVDADDLQVLHSAHNLLEVFDVAKKRRS--GAGNFSPEK----------AVQLRKLVTSVKSDYTATAMGAHHSFRLQLGEAGRASQEALAASERKRHGRVEWWEVALRHMEDTANSRGFVKRAQSELLHEKAGQYGVTVRRSFPAFDSLPGLRMALAMKIKKRNSRRTGVLRKLASLTTEPGPMEIHTNSNCRRCRKDWGMTGPICGHCKIEDDIDLWEACVVYFRRPLRNTAGGAGGGTSSALVQDAGMLG-GDRESGPGINASHQGQTFK 326
            AEVDAD LQ+LH+AHNLLEV D  K+R     AG   P +            +LR+LV  +K  Y ATA+G H S RLQL E+GRAS EAL A+ +KR G VEWWEVAL +ME T +   FV+RAQ ELLHEKAGQ+ V VRRSFP F S+ GLR AL++KIK+  ++R  VLRKL SLTT+PGPME+H+NSNCRRCR DWG TGPICGHCK+E+ ID WEACVVYFRRPL+NTA   G    S L+   G  G G   +GPG+N +HQG TFK
Sbjct: 1484 AEVDADSLQMLHAAHNLLEVLDTVKERELLLPAGQAPPARQHFRGNERSQTSELRQLVGRIKGGYVATAVGVHRSSRLQLQESGRASAEALRAAAKKRIGGVEWWEVALGYMESTRDEGDFVQRAQLELLHEKAGQHAVMVRRSFPNFTSIGGLRTALSIKIKEAQTKRKEVLRKLESLTTDPGPMEVHSNSNCRRCRADWGKTGPICGHCKVEEHIDAWEACVVYFRRPLKNTANVGGSAAGSHLLSGFGRGGEGISNAGPGVNNAHQGHTFK 1757          
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Match: A0A8J5XG88_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG88_DIALT)

HSP 1 Score: 78.2 bits (191), Expect = 3.930e-12
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 0
Query:  203 SLPGLRMALAMKIKKRNSRRTGVLRKLASLTTEPGPMEIHTNSNCRRCRKDWGMTGPICGHCKIEDDIDLWEACVVYFRRPLR 285
            SL G+R  LA    +R S R   L  L +L+ EP   E+  N  C RCR DWG +GP+C HC++ED ++ +E  ++ FRR  R
Sbjct: 1635 SLAGMRRMLARAAAERASARAATLDGLCALSAEPPVSEVSENRECGRCRVDWGRSGPVCAHCRLEDVLEAYEGTLLTFRRARR 1717          
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Match: K0RAZ9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAZ9_THAOC)

HSP 1 Score: 69.3 bits (168), Expect = 3.130e-9
Identity = 66/254 (25.98%), Postives = 116/254 (45.67%), Query Frame = 0
Query:   43 KSLVGERDDQEGAI-VALEFELKEAEVDADDLQVLHSAHNLLEVFDVAKKRRSGAGNFSPEKAVQ-LRKLVTSVKSDYTATAMGAHHSFRLQLGEAGRASQEALAASERKRHG-RVEWWEVALRHME---DTANSRGFVKRAQSELLH---------EKAGQYGVTVRRS-FPAFDSLPGLRMALAMKIKK--------RNSRRTGVLRKLASLTTEPGPMEIHTNSNCRRCRKDWGMTGPIC--GHCKIEDDI 270
            KS  G   D  G + V LE  L E E+ +D L  L + HN    F   +  R    N+  +  ++ + K    +  +Y A A   H S + QL  A  A ++  A  ++   G ++ WW+  L  +    D       V  AQ  L +         +      + VR++ +P F+++ GL ++L +++++         ++ +   + K+ +L+  P   E+  NS C RCR+DWG  GP+C   HC ++DD+
Sbjct: 1121 KSFHGSTPDGCGRVYVGLELRLFEPEISSDSLPRLSALHN--GSFICHQLLRKDNDNYELKAKLEGMEKKALHLHDEYMAHAKSIHLSRKQQLTLAVEARKKCEAQVKKMAKGSQLSWWQDLLAWLTIYGDEEEKSRMVMYAQEALGNSSNLGSAWAQAFNNDQMLVRKTPYPQFNTVDGLGVSLGLRVQQGKDELGLGSHASQEKCVCKVVNLSHNPTDKEVSLNSQCGRCREDWGAQGPVCVRAHCYLDDDL 1372          
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Match: A0A7S4JPA2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPA2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.670e-8
Identity = 42/135 (31.11%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  157 WWE--VALRHMEDTANSRGFVKRAQSELLHEKAGQYGVT-----------VRRS-FPAFDSLPGLRMALAMKIKKRNSRRT-------GVLRKLASLTTEPGPMEIHTNSNCRRCRKDWGMTGPICGHCKIEDDI 270
            W+E  ++L H+  + N R     +  EL+H+    +  T           VR + FP+F+ + GL MA  +++   N   T         +  ++ L+  P   EIH NS C++CR DW  TGP+C HCK+ED++
Sbjct:  649 WFEDFLSLMHLRGSTNQR----HSLCELVHKDLTDFYETFVEAKELETMRVRSNRFPSFNDVDGLHMAFNLRM--HNDEVTFSPCAHLEPVELVSKLSPSPALQEIHENSCCQKCRADWNQTGPVCSHCKLEDEL 777          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig941.17166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHS8_ECTSI7.310e-10758.59SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JYY0_9PHAE1.040e-9159.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5XG88_DIALT3.930e-1242.17Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
K0RAZ9_THAOC3.130e-925.98Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4JPA2_9STRA1.670e-831.11Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..76
NoneNo IPR availablePANTHERPTHR45865FAMILY NOT NAMEDcoord: 62..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig941contigS-latissima_F_contig941:74226..90737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig941.17166.1mRNA_S-latissima_F_contig941.17166.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig941 74226..90738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig941.17166.1 ID=prot_S-latissima_F_contig941.17166.1|Name=mRNA_S-latissima_F_contig941.17166.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=326bp
GGQARCDDQGWLEVTAPPASSVRGKEWRLVVETCQVVATDGEKSLVGERD
DQEGAIVALEFELKEAEVDADDLQVLHSAHNLLEVFDVAKKRRSGAGNFS
PEKAVQLRKLVTSVKSDYTATAMGAHHSFRLQLGEAGRASQEALAASERK
RHGRVEWWEVALRHMEDTANSRGFVKRAQSELLHEKAGQYGVTVRRSFPA
FDSLPGLRMALAMKIKKRNSRRTGVLRKLASLTTEPGPMEIHTNSNCRRC
RKDWGMTGPICGHCKIEDDIDLWEACVVYFRRPLRNTAGGAGGGTSSALV
QDAGMLGGDRESGPGINASHQGQTFK
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