prot_S-latissima_F_contig941.17164.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig941.17164.1
Unique Nameprot_S-latissima_F_contig941.17164.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length105
Homology
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 5.970e-41
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCELRAG 77
            MYAAACSFDKWIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TGGDGVMFVWRLSSEL +SMRDRMCELR G
Sbjct: 1067 MYAAACSFDKWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGGDGVMFVWRLSSELHESMRDRMCELRPG 1143          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A836CL69_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL69_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.540e-36
Identity = 57/74 (77.03%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCEL 74
            +YAA CSFDKWIRLFDFYSG+CLA+V+GHSEL TGVRFT DGRRL+S GGDG MFVWRLS EL ++M DR+ EL
Sbjct:    1 IYAATCSFDKWIRLFDFYSGRCLARVSGHSELVTGVRFTQDGRRLISIGGDGCMFVWRLSDELHRAMSDRLAEL 74          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S2CJK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJK0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.240e-28
Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCEL 74
            MY A CSFDKWIRLFDFYSG+CLA+VAGH+EL TG+RF+ DG RL+S GGDG +FVW+L   L  +M +R+ EL
Sbjct:   77 MYTATCSFDKWIRLFDFYSGRCLAQVAGHAELVTGLRFSADGTRLLSVGGDGCIFVWKLGGGLVSAMAERLQEL 150          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S2S3R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3R8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.580e-27
Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCELRA 76
            MY A CSFDKWIRLFDFYSG C+A+VAGH+EL TG++FTPDG+RL+S GGDG +FVW+L+S + + +++R  E+ A
Sbjct:  300 MYTATCSFDKWIRLFDFYSGACIAQVAGHAELVTGLKFTPDGKRLISIGGDGCIFVWKLNSAIARGIQEREKEIEA 375          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S2AWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWM8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.850e-27
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCE 73
            MYAA CSFD+W+RLFD +SG+CLA+V GH+EL TG+RF+ DG+RL+S GGDG +FVW+L+S++ Q++ +R+ E
Sbjct:  141 MYAATCSFDRWVRLFDLFSGRCLAQVGGHAELITGIRFSSDGQRLLSVGGDGCIFVWKLASQITQAIGERLEE 213          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A6H5L4C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C9_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.960e-21
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MYAAACSFDK--------WIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGD 51
            MYAAACSFDK        WIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TG D
Sbjct:  452 MYAAACSFDKVCVRCSIVWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGDD 510          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S3CYC9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYC9_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 8.130e-21
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    4 AACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCEL 74
            A    DK++RL DF SG+CL +V GHSEL TG++FTPD RRL+S  GDG MFVW+L S+L ++M DR+ EL
Sbjct:  116 ATSGSDKFVRLHDFLSGECLVRVGGHSELITGLKFTPDCRRLISVAGDGCMFVWKLRSDLTRAMLDRLAEL 186          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S1UAY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAY3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.200e-19
Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCELRA 76
            +Y A CS+D+W+R+ DFYSG+ +A+ AGH E+ T   FTPDG+ LV+ G DGV+F W+L   ++ ++ DR+ EL+A
Sbjct:  562 LYVATCSYDRWVRITDFYSGRVVARAAGHGEVVTAAAFTPDGQNLVTAGADGVIFSWKLPPHVRTAVSDRLQELKA 637          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A7S1CEL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEL4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.440e-18
Identity = 40/80 (50.00%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    3 AAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCELRAGSGGRA 82
            A  CSFDK IR++DFY G+ L++V  HSE+ TG+ FT D RR++S GGD  + VWRL+ EL  +MR+R+ E+++ +  RA
Sbjct:  716 AVTCSFDKAIRMYDFYEGRRLSRVTAHSEMVTGLAFTHDCRRMISVGGDACIMVWRLAPELTSAMRERLSEIQSSTDKRA 795          
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Match: A0A0L0HT87_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HT87_SPIPD)

HSP 1 Score: 89.0 bits (219), Expect = 2.010e-18
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 YAAACSFDKWIRLFDFYSGKCLAKVA-GHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSELQQSMRDRMCELRAGSGGRASVSDS 87
            YAA  + DK IR+FDFYSG CL +VA GHSEL TGV+FT D + L+STG DG +FVW+LS  + Q M+ R+ + + GSG  A+ S+S
Sbjct:  700 YAATSASDKTIRIFDFYSGDCLGRVASGHSELVTGVKFTLDCKHLISTGADGCIFVWKLSKRITQQMQKRLGK-KFGSGNGATRSNS 785          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig941.17164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN20_ECTSI5.970e-4193.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CL69_9STRA2.540e-3677.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2CJK0_9STRA1.240e-2866.22Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2S3R8_9STRA4.580e-2763.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AWM8_9STRA6.850e-2760.27Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6H5L4C9_9PHAE2.960e-2181.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3CYC9_9EUKA8.130e-2159.15Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A7S1UAY3_9STRA1.200e-1948.68Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1CEL4_9STRA1.440e-1850.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0L0HT87_SPIPD2.010e-1855.17Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 19..58
e-value: 2.1E-6
score: 37.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 20..57
e-value: 1.2E-4
score: 22.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 26..67
score: 12.681
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..104
e-value: 1.9E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR45589FAMILY NOT NAMEDcoord: 2..86
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..67
score: 14.898
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig941contigS-latissima_F_contig941:57982..59847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig941.17164.1mRNA_S-latissima_F_contig941.17164.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig941 57982..59847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig941.17164.1 ID=prot_S-latissima_F_contig941.17164.1|Name=mRNA_S-latissima_F_contig941.17164.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=105bp
MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGG
DGVMFVWRLSSELQQSMRDRMCELRAGSGGRASVSDSAGASVSASMGSAR
VASVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf