prot_S-latissima_F_contig930.17078.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig930.17078.1
Unique Nameprot_S-latissima_F_contig930.17078.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length131
Homology
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BLAST of mRNA_S-latissima_F_contig930.17078.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.500e-12
Identity = 63/131 (48.09%), Postives = 72/131 (54.96%), Query Frame = 0 
Query:    1 MAQTLMVELEALQSRCDRLSTWREERTEEAEKTISRLREDKSEVEARLRQADAAAAEARMGRDGADAERDRVSRELSSVKDSFSAAERRAEEAEAALATATESAQANQKTLSEVQEECEGVHRELEGLRKR 131
            M  TLM ELEALQSRCDRL   REER EEA+KT++RLRE           ADAAAAEAR  R GADAER R+ R+L S                 ALA          K L + + ECE +  ELE LR+R
Sbjct:  575 MTTTLMGELEALQSRCDRLVASREERAEEADKTMARLRE-----------ADAAAAEARSARAGADAERVRMGRDLQS-----------------ALA----------KDLLDSKGECEELRSELETLRRR 667
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BLAST of mRNA_S-latissima_F_contig930.17078.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-10
Identity = 60/131 (45.80%), Postives = 74/131 (56.49%), Query Frame = 0 
Query:    1 MAQTLMVELEALQSRCDRLSTWREERTEEAEKTISRLREDKSEVEARLRQADAAAAEARMGRDGADAERDRVSRELSSVKDSFSAAERRAEEAEAALATATESAQANQKTLSEVQEECEGVHRELEGLRKR 131
            M  TLM ELEALQSRCDRL   REER EEA+KT++RLRED  E+EARLRQ                     + R+L S     ++ E+ AEE EA  ATA   A    + L + + ECE +  ELE LR+R
Sbjct:  584 MTTTLMGELEALQSRCDRLVASREERAEEADKTMARLREDNRELEARLRQXXXXXXXXXXXXXXXXXXXXXMERDLHSALAKVTSLEKSAEE-EAGAATAA--ADRAVRDLRDSKGECEELRSELETLRRR 711
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig930.17078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDC5_9PHAE4.500e-1248.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT2_ECTSI1.000e-1045.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availableCOILSCoilCoilcoord: 27..54
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 22..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig930contigS-latissima_F_contig930:159703..164598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig930.17078.1mRNA_S-latissima_F_contig930.17078.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig930 159703..164598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig930.17078.1 ID=prot_S-latissima_F_contig930.17078.1|Name=mRNA_S-latissima_F_contig930.17078.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=131bp
MAQTLMVELEALQSRCDRLSTWREERTEEAEKTISRLREDKSEVEARLRQ
ADAAAAEARMGRDGADAERDRVSRELSSVKDSFSAAERRAEEAEAALATA
TESAQANQKTLSEVQEECEGVHRELEGLRKR
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