prot_S-latissima_F_contig930.17075.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig930.17075.1
Unique Nameprot_S-latissima_F_contig930.17075.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length220
Homology
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: D8LTR9_ECTSI (Mitochondrial inner membrane protease subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR9_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.040e-68
Identity = 100/164 (60.98%), Postives = 121/164 (73.78%), Query Frame = 0
Query:   56 GRGASWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAITVRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            G  +SW  +G  +  ++AW  C   CLRE+V+EPC VHGPSM+PTIEH S LLI+K    R   ++  Q+VLV+SPLE G++VVKR+TGLPGD+I+VRPP WD +NS GIE+R EVVPEGHVWL GDN DNSKDSR FGSVPQ LV G V  R+WP   FG  E
Sbjct:   72 GSSSSWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGG-RGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFIE 234          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A5J5A2Q7_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A2Q7_9ASTE)

HSP 1 Score: 132 bits (332), Expect = 1.710e-35
Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   77 CVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            C  HC   ++  P  V+GPSM PT+     +L+ +  S R   +    +VLVRSP  P K V KRI G+ GD IT  V P   D+ +++       VVP+GHVW++GDN   S DSR FG VP GL++G VCFR+WPP GFG  E
Sbjct:   29 CFLHCTNTYICSPTLVYGPSMLPTLNLTGDVLLTEHISARLGKVGVGDIVLVRSPENPRKTVTKRIVGMGGDRITFLVDPKNTDRCHTV-------VVPKGHVWIQGDNMYASNDSRHFGPVPYGLIQGKVCFRVWPPDGFGSVE 166          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A7J7E2S5_TRIWF (Uncharacterized protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7E2S5_TRIWF)

HSP 1 Score: 127 bits (318), Expect = 2.430e-33
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   69 AGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            A  +A L C+ H  + H+      HGPSM PT+     LL+ +  S R   + T  +V+VRSP+ P K+V KR+ G+ GD++T  V P   D+  ++       VVP+GH+W++GDN   S DSR+FG VP GL+EG V FR+WPP  FG  E
Sbjct:   20 ASFVAQLICILHLNKTHISTVVLSHGPSMLPTLNITPDLLLAERLSPRLGKVGTGDIVIVRSPVAPRKVVTKRVIGVEGDSVTYVVDPNTSDRCETI-------VVPKGHIWVQGDNIYASTDSRRFGPVPYGLLEGRVFFRIWPPKDFGPLE 165          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A2C9UEU1_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UEU1_MANES)

HSP 1 Score: 125 bits (314), Expect = 8.610e-33
Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   50 RVDDGLGRGASWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            RV   +   +S A++ L     +A   C+ H    ++  P  V GPSM PT+     +L+ +  S R   +    VVLVRSPL+P K+V KRI G+ GD I+  + P + D  +++       VVP+GHVW++GDN   S DSR FG VP GL++G V  R+WPP GFG  E
Sbjct:    2 RVVKYISEWSSIAKEALSQTFIVAKFLCLLHVTNAYICSPTLVFGPSMLPTLNLSGDVLLAEHVSHRLGKVGPGDVVLVRSPLDPRKIVTKRIVGMEGDRISFSLDPSSTDSCHTI-------VVPKGHVWIQGDNVYASSDSRHFGPVPYGLIQGKVFCRVWPPYGFGALE 166          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A4V3WNQ5_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4V3WNQ5_CAMSI)

HSP 1 Score: 124 bits (312), Expect = 1.720e-32
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 0
Query:   72 LAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGV 217
            +A   C+ H    ++  P  V+GPSM PT+     +++ +  S R   +    V+LVRSP  P ++V KRI G+ GD +T  V P   D+ + L       VVP+GHVW++GDN   SKDSR FG VP GL++G VC R+WPP GFG+
Sbjct:   24 VAKFLCLLHVTNNYLCSPTLVYGPSMLPTLNLTGDVVLAEYLSTRFGKVGLGDVILVRSPENPTRIVTKRIVGMEGDTVTFLVDPMNSDRSHIL-------VVPKGHVWIQGDNIYASKDSRHFGPVPYGLIQGKVCCRVWPPDGFGL 164          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: UPI001CB8C1CA (mitochondrial inner membrane protease subunit 1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8C1CA)

HSP 1 Score: 124 bits (311), Expect = 2.290e-32
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 0
Query:   55 LGRGASWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFG 216
            LGR +  A++ +  A   A   C+ H    ++  P  V+GPSM PT+     +++ +  S R   +    VVLV+SP  P KM+ KRI  + G +++  V P   D+ ++L       VVP+GHVW++GDN   SKDSR FG +P GL++G VC R+WP  GFG
Sbjct:    6 LGRFSGLAKESINRAAIFAKFLCLLHVTNTYIFSPTLVYGPSMLPTLNLTGDVVLSEFISHRIGKVGPGDVVLVQSPENPRKMITKRILAMEGQSVSFLVNPNRGDRSHTL-------VVPKGHVWIQGDNIYASKDSRNFGPIPYGLIQGKVCCRVWPIDGFG 162          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A5B6YYR0_DAVIN (Uncharacterized protein n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YYR0_DAVIN)

HSP 1 Score: 124 bits (310), Expect = 3.430e-32
Identity = 65/142 (45.77%), Postives = 82/142 (57.75%), Query Frame = 0
Query:   77 CVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFG 216
            C+ H    +V  P  V+GPSM PT+     +L+ +  S R   +    VVLV SP  P K V KRI G+ GD IT  V P   D+  ++       VVP+GHVW++GDN   S DSR FG VP GL+ G VCFR+WPP GFG
Sbjct:   29 CLLHVTNTYVCSPTLVYGPSMLPTLNLTGDVLLTEHISARLGKVGLGDVVLVCSPENPRKTVTKRIVGMGGDRITFLVDPKNSDRCQTV-------VVPKGHVWIQGDNMYASNDSRHFGPVPYGLIRGKVCFRVWPPDGFG 163          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: UPI0010A2F8AD (mitochondrial inner membrane protease subunit 1 isoform X4 n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2F8AD)

HSP 1 Score: 123 bits (309), Expect = 4.840e-32
Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0
Query:   77 CVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAITVRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            C+ H    ++  P  VHGPSM PT+     +++ +  S R   L    +VL+RSPL P + + KRI GL GD IT   P   +H  L +     VVP GHVW++GDN   S+DSR FG +P GL+EG V FR+WPP  FG  +
Sbjct:   29 CLLHVTDNYLCSPSHVHGPSMLPTMNLTGDVILAEHVSPRLGKLGPGDLVLIRSPLNPNRTLTKRIVGLEGDRITYFDP---RHGDLPLNA---VVPVGHVWIQGDNIYASRDSRHFGPIPYGLIEGRVFFRVWPPHSFGPLD 165          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: UPI000B7901D3 (mitochondrial inner membrane protease subunit 1 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7901D3)

HSP 1 Score: 123 bits (309), Expect = 4.980e-32
Identity = 67/162 (41.36%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   60 SWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFGVFE 219
            S A+Q       +A   C+ H    ++     V+GPSM PT+     +L+ +  S R   L    VVLVRSP++P K+V KRI G+ GD IT  + P + D  N +       VVP+GHVW++GDN   S DSR FG VP GL++G V  R+WPP  FG  E
Sbjct:   12 SIAKQAFTQTSIVAKFLCLLHVTNNYLCSSTLVYGPSMLPTLNISGDVLLVEHISHRLGKLGPGDVVLVRSPVDPRKIVTKRIVGMEGDRITFLLDPSSNDSCNII-------VVPKGHVWIQGDNMYASSDSRHFGPVPYGLIQGKVFMRVWPPHSFGSLE 166          
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Match: A0A835DQD4_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DQD4_9MAGN)

HSP 1 Score: 123 bits (309), Expect = 5.130e-32
Identity = 67/164 (40.85%), Postives = 94/164 (57.32%), Query Frame = 0
Query:   55 LGRGASWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPTIEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAIT--VRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGLVEGVVCFRLWPPTGFG 216
            LG+  S A++ L     +A   C  H    ++  P  V+GPSM PT+     +L+ +  S R   +    VVLVRSP  P K+V KR+ G+ GD +T  V P   D+ +++       VVP+GHVW++GDN   S DSR FG+VP GL++G V  R+WPP GFG
Sbjct:    6 LGQWKSIAKEALDRTMIVAKFLCFLHVTNTYICTPTLVYGPSMLPTLNLTGDVLLTERISTRFGRVAPGDVVLVRSPENPRKIVTKRVVGMEGDQVTFLVNPKNSDRCDTV-------VVPKGHVWIQGDNMYASNDSRHFGAVPYGLLQGKVLCRVWPPDGFG 162          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig930.17075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR9_ECTSI8.040e-6860.98Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A5J5A2Q7_9ASTE1.710e-3545.52Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A7J7E2S5_TRIWF2.430e-3342.48Uncharacterized protein n=1 Tax=Tripterygium wilfo... [more]
A0A2C9UEU1_MANES8.610e-3340.12Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
A0A4V3WNQ5_CAMSI1.720e-3242.57Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
UPI001CB8C1CA2.290e-3239.02mitochondrial inner membrane protease subunit 1 n=... [more]
A0A5B6YYR0_DAVIN3.430e-3245.77Uncharacterized protein n=2 Tax=Davidia involucrat... [more]
UPI0010A2F8AD4.840e-3243.36mitochondrial inner membrane protease subunit 1 is... [more]
UPI000B7901D34.980e-3241.36mitochondrial inner membrane protease subunit 1 n=... [more]
A0A835DQD4_9MAGN5.130e-3240.85Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 138..150
score: 50.37
coord: 85..101
score: 35.01
coord: 172..191
score: 53.81
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 76..153
e-value: 5.2E-14
score: 50.4
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 92..152
e-value: 4.0E-8
score: 33.1
NoneNo IPR availableGENE3D2.10.109.10coord: 82..215
e-value: 9.1E-24
score: 85.7
NoneNo IPR availablePANTHERPTHR12383PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATEDcoord: 72..217
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 140..152
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 83..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig930contigS-latissima_F_contig930:56947..63654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig930.17075.1mRNA_S-latissima_F_contig930.17075.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig930 56891..63876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig930.17075.1 ID=prot_S-latissima_F_contig930.17075.1|Name=mRNA_S-latissima_F_contig930.17075.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=220bp
MSAVGLELLRTYSARAFQTSGSRRFSSGRHQQRTKFKIHVASPKKGGKAR
VDDGLGRGASWARQGLLWAGELAWLACVAHCLREHVLEPCAVHGPSMQPT
IEHKSWLLIDKTRSWRTAPLKTAQVVLVRSPLEPGKMVVKRITGLPGDAI
TVRPPAWDKHNSLGIERRLEVVPEGHVWLEGDNQDNSKDSRKFGSVPQGL
VEGVVCFRLWPPTGFGVFE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR015927Peptidase_S24_S26A/B/C
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR036286LexA/Signal_pep-like_sf