prot_S-latissima_F_contig93.17066.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig93.17066.1
Unique Nameprot_S-latissima_F_contig93.17066.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length386
Homology
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BLAST of mRNA_S-latissima_F_contig93.17066.1 vs. uniprot
Match: D7FQH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH0_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 9.960e-28
Identity = 54/85 (63.53%), Postives = 71/85 (83.53%), Query Frame = 0 
Query:   46 RYIRLLDVDSEALYEMVMGACERVGSFKVLGWCQRRWIMDLVFECERDAVAAVDDIEHLHLKSCRLGRPVKVLLKRANFNGGFTS 130
            RY+R+LD+DS+ LY+ V+ AC+RVGSF+V+GWC+RRW+MD++FE  RDA AA+DDI+HL L S R  RP+K LLK A F+GGFTS
Sbjct:   60 RYVRILDIDSDPLYQAVLDACDRVGSFRVVGWCKRRWLMDILFESRRDAAAALDDIDHLRLASSRSRRPIKTLLKPARFDGGFTS 144
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BLAST of mRNA_S-latissima_F_contig93.17066.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.890e-27
Identity = 53/85 (62.35%), Postives = 71/85 (83.53%), Query Frame = 0 
Query:   46 RYIRLLDVDSEALYEMVMGACERVGSFKVLGWCQRRWIMDLVFECERDAVAAVDDIEHLHLKSCRLGRPVKVLLKRANFNGGFTS 130
            RY+R+LD+DS+ LY+ V+ AC+RVGSF+V+GWC+RRW+MD++FE  RDA AA+DDI+HL L S R  RP+K LLK A FNGGF++
Sbjct: 1092 RYVRILDIDSDPLYQAVLDACDRVGSFRVVGWCKRRWLMDILFESRRDAAAALDDIDHLRLASSRSRRPIKTLLKPARFNGGFSN 1176
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig93.17066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQH0_ECTSI9.960e-2863.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1S2_9PHAE3.890e-2762.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig93contigS-latissima_F_contig93:259483..263713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig93.17066.1mRNA_S-latissima_F_contig93.17066.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig93 259483..263713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig93.17066.1 ID=prot_S-latissima_F_contig93.17066.1|Name=mRNA_S-latissima_F_contig93.17066.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=386bp
MADFGIPGRPVLGTAGVPGVGGRGRGGGAALKVTVNTAESDQSKQRYIRL
LDVDSEALYEMVMGACERVGSFKVLGWCQRRWIMDLVFECERDAVAAVDD
IEHLHLKSCRLGRPVKVLLKRANFNGGFTSPPPPSLSPFSGNPHHLAAGS
PSSAAEAAAAATAAAASTKVTAAAASTLSCLASARPSGTPPALFAPPVVP
QHAPSNGPPTSMWPPSSSSSSSSSSSRRQQQALGSRFVAIAPPGGRWSPP
GMLRTEGAVGAEAAVAKAAELAQEIAAASRAPDMLPSPSARSSTPVRRMS
ASAAAAAAAGARAMAGSGPRITVRGMNASVVRHPRNGHLGLGGGGSGSGG
GGDGGGHMHPTLEEAAGRNAGPLGFQGPFGAGWASG
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