prot_S-latissima_F_contig92.16975.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig92.16975.1
Unique Nameprot_S-latissima_F_contig92.16975.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length568
Homology
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: A0A6H5JUN4_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN4_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 1.620e-102
Identity = 205/428 (47.90%), Postives = 243/428 (56.78%), Query Frame = 0
Query:  171 ARLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQCGNNHSSP-GQRKETDTCGASSRRAAAFKHQGGGCTLGSFLRP--FIAPTRHGRDSQGRWGGSAAGRSHACPLNAPPPPPSPP--CGMCSGRPPHGASSSYLTV--DASTEEGD---TPSGAPVGSTVAIMDPSPCPCAIE------------RGGKPGRGSGRDGXXXXXXXXXXXXXGATSNARTAGGGQGVYRPPLLWPVGGSKFAYSAGEGPVVHPLRLRSAYSQQADAWGTGEPSFTTYHHMFKGTVDYIFYG---------PGASLETSNDADGGGSSPDAPTSEEATSPL---VAAKRGSLRCVGVSEPPLRCDLDHFGGLPSPEEPSDHVLLAVRFEVVPP 564
            ARLV+ANTHL+FNPKRGDIK AQLMMLT +V+RL+R+S ADGV+ICGDFNMTPDSA YHYMVKG + +DG+NRF+ SGQC  N +    QRKETD  G    R +  KHQG GC+LGSFLRP      T  GR                               C  CS R   GA S+Y+    DAST        P  AP G+  A++DPSPC C               RG +  +G G DG                        G+  Y PP++WP  G K AY  G GPV H LRLRSAY+Q+ DAWGTGEP+F+++HHMFKGTVDYIFYG         P A+  +  D        + P SE  T+     V  + G LRC+GV+EPPLRCDL  FGGLPSPEEPSDH+LLA RFEV  P
Sbjct:  224 ARLVVANTHLVFNPKRGDIKTAQLMMLTGQVERLARTSCADGVMICGDFNMTPDSALYHYMVKGSVAMDGLNRFTVSGQCQPNRNMYYDQRKETDNSGILPHRKSGAKHQGSGCSLGSFLRPPGSAVATSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCEECSNR--DGAPSTYVVAGDDASTAAAAGYRCPPDAPPGTLFAVLDPSPCRCTAAGPAAGERRSDGGRGTRSAKGGGDDGDGPQERFHR---------------GREAYDPPVMWPSNGDKLAYRRGRGPVAHGLRLRSAYAQRRDAWGTGEPAFSSFHHMFKGTVDYIFYGQCMPSEEGPPNAAHHSGQD--------NLPQSENPTAAERAPVVPEAGCLRCIGVAEPPLRCDLAQFGGLPSPEEPSDHILLAARFEVTQP 626          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: D7FTI6_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI6_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.090e-73
Identity = 179/389 (46.02%), Postives = 209/389 (53.73%), Query Frame = 0
Query:  201 VQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQCGNNHSSP-GQRKETDTCGASSRRAAAFKHQGGGCTLGSFLRP---FIAPTRHGRDSQGRWGGSAAGRSHACPLNAPPPPPSPPCGMCSGRPPHGASSSYLTVDASTEEGDT--------PSGAPVGSTVAIMDPSPCPC-AIERGGKPGRGSGRDGXXXXXXXXXXXXXGATSNARTAGGGQGVYRPPLLWPVGGSKFAYSAGEGPVVHPLRLRSAYSQQADAWGTGEPSFTTYHHMFKGTVDYIFYG---------PGASLETSNDADGGGSSPDAPTSEEATSPL---VAAKRGSLRCVGVSEPPLRCDLDHFGGLPSPEEPSDHVLLAVRFEVVPP 564
            + RL+R+S ADGV+ICGDFNMTPDSA YHYMVKG + +DG+NRF  SGQC +N +    QRKET   G    R    KHQG GC+LGSFLRP    +A T                                                                     P GAP G+  A++DPSPC C A+E    P  G  R  XXXXXXXXXXXXX            Q  Y PP+LWP  G K AY  G GPV H LRLRSAY+Q+ D+WGTGEP+F+++HHMFKGTVDYIFYG         P A+     D        + P SE  T+     V  +RG LRC+GV+EPPLRCDL  FGGLPSPEEPSDH+LLA RFEV  P
Sbjct:  107 LDRLARTSGADGVMICGDFNMTPDSALYHYMVKGAVDMDGLNRFMVSGQCESNRNMCYHQRKETSNSGILPHREPDAKHQGSGCSLGSFLRPPVSAVATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRCPPGAPPGTLFAVLDPSPCRCTAVE----PAAGERRSDXXXXXXXXXXXXXXXXP--------QEAYDPPVLWPRNGDKLAYRRGTGPVAHGLRLRSAYAQRGDSWGTGEPAFSSFHHMFKGTVDYIFYGQCMPSEEGPPNAAHHNVQD--------NLPQSENPTAAEGAPVVLERGCLRCIGVAEPPLRCDLARFGGLPSPEEPSDHILLAARFEVTQP 475          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: A0A4D9DCC0_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCC0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-15
Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 0
Query:  172 RLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRL-SRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ---------CGNNHSSPGQRKETDTCGASS----RRAAAFKHQGGGCTLGSFLRPFIAPTRHGRDSQGRWG 307
            +LV+ANTHLLFNP+RGD+K+AQL +L  RVQ L SR   AD V++CGDFN TPDSA Y +M  G L V  +NR    G+         C  ++S  G      T G +S    R AA    +    + G   R  +    +GRD +GR G
Sbjct:  261 KLVVANTHLLFNPRRGDVKLAQLQVLLARVQALRSRHPSAD-VVVCGDFNATPDSALYAWMSAGFLDVTALNRRWVGGRREGAAGAVACAEDYSPGGLPPLVHTLGLASAYAHRPAAWTTGEPAFTSYGGSFRGTVDYIWYGRDDRGRGG 409          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: B3RKK7_TRIAD (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RKK7_TRIAD)

HSP 1 Score: 84.0 bits (206), Expect = 9.450e-14
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  172 RLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            +L IANTHLL+NPKRGD+K+AQL  L   +  L+ S+    VI+CGDFN TP SA + ++ +G L  DG+NR + SGQ
Sbjct:  157 KLCIANTHLLYNPKRGDVKLAQLTKLFAEINNLTTSANCP-VILCGDFNSTPTSALFQFISEGHLVYDGLNRKTLSGQ 233          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: G3PEA7_GASAC (Angel homolog 2 (Drosophila) n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PEA7_GASAC)

HSP 1 Score: 82.4 bits (202), Expect = 2.340e-13
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0
Query:  170 TARLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSR--SSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            TA L +ANTHLL+NP RGDIK+AQL +L   + RLSR     A+ V++CGDFN TP S  Y ++  G L   G+ R   SGQ
Sbjct:  137 TAFLCVANTHLLYNPNRGDIKLAQLAILLAEIGRLSRLPDGSANPVVLCGDFNSTPRSPLYGFLTTGRLDYRGLQRSMVSGQ 218          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: A0A7K6B767_UPUEP (ANGE1 protein (Fragment) n=1 Tax=Upupa epops TaxID=57439 RepID=A0A7K6B767_UPUEP)

HSP 1 Score: 81.6 bits (200), Expect = 4.160e-13
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
Query:  167 VRATARLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSRSSEAD--GVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            ++A + L +ANTHLLFNP+RGDIK+ Q+ ML   + ++++++E     VI+CGD N  PDS  Y ++  GEL   GM  +  SGQ
Sbjct:   65 LKAVSPLCVANTHLLFNPRRGDIKLTQMAMLLAEIDKIAKTTEGSYYPVILCGDLNSVPDSPLYRFIRNGELSYQGMPAWKVSGQ 149          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: G5B686_HETGA (Angel-like protein 1 n=1 Tax=Heterocephalus glaber TaxID=10181 RepID=G5B686_HETGA)

HSP 1 Score: 83.2 bits (204), Expect = 5.520e-13
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 0
Query:  171 ARLVIANTHLLFNPKRGDIKMAQLMML---TDRVQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            A L +ANTH+L+NP+RGD+K+AQ+ +L    D+V RLS  S    +I+CGD N TP+S  Y+++  GELH DGM  +  SGQ
Sbjct:  468 APLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCP-IILCGDLNSTPNSPLYNFIRDGELHYDGMPAWKVSGQ 548          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: A0A7M5V041_9CNID (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V041_9CNID)

HSP 1 Score: 81.6 bits (200), Expect = 7.370e-13
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  173 LVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSRSSEAD-GVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQCG 251
            + + NTHLLFN KRGDIK+AQL  L   V RLS    ++  VI+CGDFN TP S  Y ++++GEL  DG++R   SGQ G
Sbjct:  192 ICVGNTHLLFNTKRGDIKLAQLAHLFAEVDRLSTDCRSNLPVILCGDFNSTPFSPLYDFLIRGELKFDGISRTVISGQDG 271          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: UPI001F5CFC13 (carbon catabolite repressor protein 4 homolog 6-like isoform X1 n=4 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CFC13)

HSP 1 Score: 82.8 bits (203), Expect = 8.240e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  172 RLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            R+VI N H+L+NPKRGDIK+ Q+  L DR   +S+      VI+CGDFN TP S  Y+++ + +L++ G+ R+S SGQ
Sbjct:  348 RVVICNIHVLYNPKRGDIKLGQVRTLLDRAYAMSKMQNDAPVILCGDFNATPKSPLYNFLSEQKLNLSGLTRYSISGQ 425          
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Match: UPI001A98920D (protein angel homolog 2 isoform X1 n=4 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A98920D)

HSP 1 Score: 82.4 bits (202), Expect = 8.490e-13
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0
Query:  170 TARLVIANTHLLFNPKRGDIKMAQLMMLTDRVQRLSR--SSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQ 249
            TA L +ANTHLL+NP RGDIK+AQL +L   + RLSR     A+ V++CGDFN TP S  Y ++  G L   G+ R   SGQ
Sbjct:  404 TAFLCVANTHLLYNPNRGDIKLAQLAILLAEIGRLSRLPDGSANPVVLCGDFNSTPRSPLYGFLTTGRLDYRGLQRSMVSGQ 485          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig92.16975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUN4_9PHAE1.620e-10247.90Endo/exonuclease/phosphatase domain-containing pro... [more]
D7FTI6_ECTSI1.090e-7346.02Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A4D9DCC0_9STRA1.020e-1542.00Endo/exonuclease/phosphatase domain-containing pro... [more]
B3RKK7_TRIAD9.450e-1452.56Endo/exonuclease/phosphatase domain-containing pro... [more]
G3PEA7_GASAC2.340e-1351.22Angel homolog 2 (Drosophila) n=1 Tax=Gasterosteus ... [more]
A0A7K6B767_UPUEP4.160e-1344.71ANGE1 protein (Fragment) n=1 Tax=Upupa epops TaxID... [more]
G5B686_HETGA5.520e-1350.00Angel-like protein 1 n=1 Tax=Heterocephalus glaber... [more]
A0A7M5V041_9CNID7.370e-1352.50Endo/exonuclease/phosphatase domain-containing pro... [more]
UPI001F5CFC138.240e-1347.44carbon catabolite repressor protein 4 homolog 6-li... [more]
UPI001A98920D8.490e-1351.22protein angel homolog 2 isoform X1 n=4 Tax=Gastero... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 209..504
e-value: 3.5E-6
score: 26.7
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 169..561
NoneNo IPR availablePANTHERPTHR12121:SF74PROTEIN ANGELcoord: 169..561
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 172..560

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig92contigS-latissima_F_contig92:546844..561342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig92.16975.1mRNA_S-latissima_F_contig92.16975.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig92 535950..561714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig92.16975.1 ID=prot_S-latissima_F_contig92.16975.1|Name=mRNA_S-latissima_F_contig92.16975.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=568bp
MPTRGGRGPVPQLLREALGVVGIRRCILPSRWRQGRWVRHLRPGTPVPPR
RTGGRGVPNPRSPGAGPRQHCPFGCGCRMFSRGLSKRTHFLRKQQHQRRR
YTSDGGGGEHVTGPSEGGEKKSRHAEEHKRSDGGGSRAAQTAAPVASTPA
ASKPSRLSGDAGKAAPVRATARLVIANTHLLFNPKRGDIKMAQLMMLTDR
VQRLSRSSEADGVIICGDFNMTPDSACYHYMVKGELHVDGMNRFSASGQC
GNNHSSPGQRKETDTCGASSRRAAAFKHQGGGCTLGSFLRPFIAPTRHGR
DSQGRWGGSAAGRSHACPLNAPPPPPSPPCGMCSGRPPHGASSSYLTVDA
STEEGDTPSGAPVGSTVAIMDPSPCPCAIERGGKPGRGSGRDGNGGNGSS
RSGGGRGATSNARTAGGGQGVYRPPLLWPVGGSKFAYSAGEGPVVHPLRL
RSAYSQQADAWGTGEPSFTTYHHMFKGTVDYIFYGPGASLETSNDADGGG
SSPDAPTSEEATSPLVAAKRGSLRCVGVSEPPLRCDLDHFGGLPSPEEPS
DHVLLAVRFEVVPPPPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf