prot_S-latissima_F_contig90.16820.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig90.16820.1
Unique Nameprot_S-latissima_F_contig90.16820.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length551
Homology
BLAST of mRNA_S-latissima_F_contig90.16820.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 3.630e-47
Identity = 159/318 (50.00%), Postives = 181/318 (56.92%), Query Frame = 0
Query:   75 IEENIRDPFTEVGVTAKCLLRLQLLSGGWVRVFPATRTPPSTSTAAAAVTATPAPGRTLNPRLPDTTNTSNSPHSRPQGPHSNFCQYSSATQRNGADIFGEGLLCRAVAVGPGSTSAADWPAATAVGVGGGDQGQGP----PLASDEVFLPPSVAFNAGLGPFSVYVVVRRADNDGXXXXXXXXXXXXXXXXXXXXXLVGGGAVLHRPPPIARTASVSRVKRPR-SGASGXXXXXXXXXXXXXXXXXXXCAWSGPVSTAKRARAHALALTSFFSTPRVLRVGDVFGVSVPRPSGGGSGVGCWWQELPEDDSADSDADE 387
            +  +IRDPFTEVGVT +CL RLQLLSGGWVRV+PA  T    +TAAA+ T  PA              +S SPH  P  PH      S     N A     GLLCR VAV  GS           VG  G D+  G     PLA DE  +PPSVAFNAGLGP+S +V++R A N GXXXXXXXXX               G A+LH PP IA  ASVSRVK+PR +G  GXXXXXX                     TA+RA+AHALALTSFFS PRVL VGD+FGV +PRP    +G GCWWQEL E D  DSD +E
Sbjct:   15 VGNSIRDPFTEVGVTPRCLRRLQLLSGGWVRVYPAATT---AATAAASTTTHPA-------------FSSRSPHHLP--PH----DVSPRPLENQAI----GLLCRVVAVSNGS-----------VGDSGDDRRGGSGGVRPLADDEALIPPSVAFNAGLGPYSDHVILRWASNSGXXXXXXXXXH--------------GAALLHSPPAIACAASVSRVKKPRPTGVPGXXXXXX---------------------TARRAKAHALALTSFFSAPRVLCVGDIFGVPIPRPGSSTTG-GCWWQELQEKDGDDSDCEE 259          
BLAST of mRNA_S-latissima_F_contig90.16820.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.130e-25
Identity = 98/193 (50.78%), Postives = 111/193 (57.51%), Query Frame = 0
Query:  176 GLLCRAVAVGPGSTSAADWPAATAVGVGGGDQGQGPP-----LASDEVFLPPSVAFNAGLGPFSVYVVVRRADNDGXXXXXXXXXXXXXXXXXXXXXLVGGGAVLHRPPPIARTASVSRVKRPR-SGASGXXXXXXXXXXXXXXXXXXXCAWSGPVSTAKRARAHALALTSFFSTPRVLRVGDVFGVSVPRPS 362
            GLLCR VAVG GS   +            GD  +G       LA DE  +PPSVAFNAGLGP+S +V++R A N G    XX                  G  +LH PPPIA  ASVSRVKRPR +GA GXXXXXXXXXX                  A+R +AHALALTSFFS PRVLRVGD+FGVS+PRPS
Sbjct:   30 GLLCRVVAVGNGSVDDS------------GDDRRGGSGSMYALADDEALIPPSVAFNAGLGPYSDHVILRWASNSGGNSGXXNSKH--------------GTVLLHSPPPIACAASVSRVKRPRPTGAPGXXXXXXXXXX------------------ARREKAHALALTSFFSAPRVLRVGDIFGVSIPRPS 178          
BLAST of mRNA_S-latissima_F_contig90.16820.1 vs. uniprot
Match: A0A836CKR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.620e-5
Identity = 53/152 (34.87%), Postives = 68/152 (44.74%), Query Frame = 0
Query:  212 PLASDEVFLPPSVAFNAGLGPFSVYVVVRRADNDGXXXXXXXXXXXXXXXXXXXXXLVGGGAVLHRPPPIARTASVSRVKRPRSGASGXXXXXXXXXXXXXXXXXXXCAWSGPVSTAKRARAHALALTSFFSTPRVLRVGDVFGVSVPRPSG 363
            P   D V +PP +AFN G+GPF  +V ++R D                    XXXX     A     PP+AR ASV+RV+   +GAS                          +  A R   +ALAL+++FS PRVL V DVFGV  PR  G
Sbjct:   51 PGDGDAVLVPPGLAFNIGMGPFDTHVDIKRLDG-----------RRIIGAAAXXXXXTARSAREPGAPPLAREASVARVQ---AGASRE---------------------EARMFVAPRTN-YALALSAYFSAPRVLSVDDVFGVPCPRRGG 166          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig90.16820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLK3_ECTSI3.630e-4750.00AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JDF2_9PHAE3.130e-2550.78AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CKR6_9STRA6.620e-534.87P-loop containing nucleoside triphosphate hydrolas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig90contigS-latissima_F_contig90:14502..17311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig90.16820.1mRNA_S-latissima_F_contig90.16820.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig90 14502..17313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig90.16820.1 ID=prot_S-latissima_F_contig90.16820.1|Name=mRNA_S-latissima_F_contig90.16820.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=551bp
QGNNEVKLRDQLYTQMRNRLPLVCSVQQSAAGAAKDSVSWCGVRLKVRHL
TAPLSPGFSAIAPSLRTPLAGGSGIEENIRDPFTEVGVTAKCLLRLQLLS
GGWVRVFPATRTPPSTSTAAAAVTATPAPGRTLNPRLPDTTNTSNSPHSR
PQGPHSNFCQYSSATQRNGADIFGEGLLCRAVAVGPGSTSAADWPAATAV
GVGGGDQGQGPPLASDEVFLPPSVAFNAGLGPFSVYVVVRRADNDGGGGG
GGGIGGADGSGSGSGLGLVGGGAVLHRPPPIARTASVSRVKRPRSGASGG
GGSGGDGSGGSGGGGRGGCAWSGPVSTAKRARAHALALTSFFSTPRVLRV
GDVFGVSVPRPSGGGSGVGCWWQELPEDDSADSDADEEEVADTASTAAAT
PSAAIATAAPGTAPAAEQQPWFSWGAREARTVSGSGSGSASELAAAPSPS
PAPAPAPASSLPPASALALMGTGAPKRATEHLAATPSGARGARRANGEAH
EAREAGGAGGAGGAGEMEGSRRRRDNSEGGRFREAIVRQGSDLVYFRVTG
L
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