prot_S-latissima_F_contig1076.641.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1076.641.1
Unique Nameprot_S-latissima_F_contig1076.641.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length448
Homology
BLAST of mRNA_S-latissima_F_contig1076.641.1 vs. uniprot
Match: A0A6H5L2Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Z5_9PHAE)

HSP 1 Score: 551 bits (1419), Expect = 1.620e-174
Identity = 278/422 (65.88%), Postives = 330/422 (78.20%), Query Frame = 0
Query:    1 MKGGKMGKFAYKKRLREGLDAAYQN----RGMLFCMQEAILYMRGRDPICPAYRPRWWPH-PSTSPQLRAPLVGAWFEGRRIGAASLAPWQMRRNLFGRDVTAAAGAAAVAAAGEESRVRADGTRVPAMMVLPLEAVRRRLPEFDEGLAVPVSRIPKTAAVVWISHCWMGTPSRPDDQANSKAKAIYEGLRSLDRDEVYVWIDASCLPNNV------RPAREEEAVSAASKGLAVAEAVAAADAAEVQTEGQALEELGHRARTIRALPLYLLCCDFFLSLDELEPVYMCSPWTRLERAALREAITLTSGGGSTKTTRAGHPRMLGIKRDETVSIAGTSKRGTAMITHHNNLAALPKLELIPPFSQGSKAGASGMWAADVPAIRRSFELLQGLSMARANLARYPCMDVPRLAPDEELSDQPVL 411
            +KGGKM KF Y+KRLREGLDAAYQ+    RGMLFC+QEA+LY+RG+DPICP Y PRWWP  P+TSPQ+RAPLVG+WFEGRR+GAASL PWQMR NLFG    A  G      AG  SRVRADGTRVP MMVLPL AV++RLP+FDEGL VPVS IP+ A VVW+SH W GTP+RPDDQ N+KAKAIYEGL +LDR +VYVW+D SCLP +V      R    + AV    +G AVAEAVA + +   QTE +ALEE+G RARTIRALPL+LLCCD+FLS+D+ EP+Y  SPWTRLERAALRE +TLTSGGG+TKTTRAGHPRML + RDET S     KR T +++H NNL+ LPKLE +PPF  GSK+ ASG+WA+DVPA++RSF+LL GLS+ RA LARYP +D+PRL   EE  D P++
Sbjct: 1407 VKGGKMTKFPYQKRLREGLDAAYQSECGDRGMLFCLQEALLYVRGKDPICPGYSPRWWPSSPATSPQIRAPLVGSWFEGRRVGAASLLPWQMRHNLFGEGALADDGGTG---AGSPSRVRADGTRVPPMMVLPLSAVQKRLPDFDEGLTVPVSEIPRNAVVVWVSHYWGGTPARPDDQGNTKAKAIYEGLTNLDRGDVYVWVDVSCLPQSVQQPAGGRGGGGDAAVPTTPRGKAVAEAVAFSSSGRSQTEVEALEEVGQRARTIRALPLFLLCCDYFLSVDDREPIYTRSPWTRLERAALREVLTLTSGGGATKTTRAGHPRMLRMLRDETASFMDLPKRSTTVVSHLNNLSMLPKLEALPPFGPGSKSAASGIWASDVPAMQRSFQLLDGLSLMRAKLARYPAVDIPRLHLAEEGEDTPIV 1825          
BLAST of mRNA_S-latissima_F_contig1076.641.1 vs. uniprot
Match: D7FQV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV9_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 1.710e-168
Identity = 265/389 (68.12%), Postives = 313/389 (80.46%), Query Frame = 0
Query:    2 KGGKMGKFAYKKRLREGLDAAYQNRGMLFCMQEAILYMRGRDPICPAYRPRWWPH-PSTSPQLRAPLVGAWFEGRRIGAASLAPWQMRRNLFGRDVTAAAGAAAVAAAGEESRVRADGTRVPAMMVLPLEAVRRRLPEFDEGLAVPVSRIPKTAAVVWISHCWMGTPSRPDDQANSKAKAIYEGLRSLDRDEVYVWIDASCLPNNVR-PARE---EEAVSAASKGLAVAEAVAAADAAEVQTEGQALEELGHRARTIRALPLYLLCCDFFLSLDELEPVYMCSPWTRLERAALREAITLTSGGGSTKTTRAGHPRMLGIKRDETVSIAGTSKRGTAMITHHNNLAALPKLELIPPFSQGSKAGASGMWAADVPAIRRSFELLQGLSMAR 385
            KGGKM KF Y+KRLREGLDAAYQNRGMLFC+QEA+LY+RG+DPICP Y PRWWP  P+TSPQ+RAPLVG+WFEGRR+GAASL PWQMR NLFG    A  G A    AG  SRVRADGTRVP MMVLPL AV++RLP+FDEGL VPVS IP+ A VVW+SH W GTP+RPDDQ N+KAKAIYEGL +LDR +VYVW+D SCLP + + PA     + AV    +G AVAEAVA + +   QTE +ALEE+G RARTIRALPL+LLCCD+FLS+D+ EP+Y  SPWTRLERAALRE +TLTSGGG+TKTTRAGHPRML + RDET S     KR T +++H NNL+ LPKLE +PPF  GSK+ ASG+WA+DVPA++RSF+LL GLS+ +
Sbjct: 1261 KGGKMTKFPYQKRLREGLDAAYQNRGMLFCLQEALLYVRGKDPICPGYSPRWWPSSPATSPQIRAPLVGSWFEGRRVGAASLLPWQMRHNLFGEGALANGGGAG---AGSPSRVRADGTRVPPMMVLPLSAVQKRLPDFDEGLTVPVSEIPRNAVVVWVSHYWGGTPARPDDQGNTKAKAIYEGLVNLDRGDVYVWVDVSCLPQSAQQPAGGGGGDAAVPTTPRGKAVAEAVAFSSSGRSQTEVEALEEVGQRARTIRALPLFLLCCDYFLSVDDREPIYTRSPWTRLERAALREVLTLTSGGGATKTTRAGHPRMLRMLRDETASFMDLPKRSTTVVSHMNNLSMLPKLEALPPFGPGSKSAASGIWASDVPAMQRSFQLLDGLSLGQ 1646          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1076.641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2Z5_9PHAE1.620e-17465.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV9_ECTSI1.710e-16868.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1076contigS-latissima_F_contig1076:44183..49147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1076.641.1mRNA_S-latissima_F_contig1076.641.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1076 44182..49147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1076.641.1 ID=prot_S-latissima_F_contig1076.641.1|Name=mRNA_S-latissima_F_contig1076.641.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=448bp
MKGGKMGKFAYKKRLREGLDAAYQNRGMLFCMQEAILYMRGRDPICPAYR
PRWWPHPSTSPQLRAPLVGAWFEGRRIGAASLAPWQMRRNLFGRDVTAAA
GAAAVAAAGEESRVRADGTRVPAMMVLPLEAVRRRLPEFDEGLAVPVSRI
PKTAAVVWISHCWMGTPSRPDDQANSKAKAIYEGLRSLDRDEVYVWIDAS
CLPNNVRPAREEEAVSAASKGLAVAEAVAAADAAEVQTEGQALEELGHRA
RTIRALPLYLLCCDFFLSLDELEPVYMCSPWTRLERAALREAITLTSGGG
STKTTRAGHPRMLGIKRDETVSIAGTSKRGTAMITHHNNLAALPKLELIP
PFSQGSKAGASGMWAADVPAIRRSFELLQGLSMARANLARYPCMDVPRLA
PDEELSDQPVLRDSEEPLVDEGEAETGSGGGGGRGGRGDGGNGRGDRG
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