prot_S-latissima_F_contig1045.406.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1045.406.1
Unique Nameprot_S-latissima_F_contig1045.406.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length229
Homology
BLAST of mRNA_S-latissima_F_contig1045.406.1 vs. uniprot
Match: A0A6H5JZC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC6_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.560e-50
Identity = 87/145 (60.00%), Postives = 112/145 (77.24%), Query Frame = 0
Query:   85 NARLEANFCSTQRLKVGQIQRTEYNRQINQLGQKIVKESYKTKGWVEGNAPYVLVPREQLPSGRDTVFSAALLSSLKVFCLDGNHRVQALLDLEGADFEIECRLYLHFDCDETVNSLARSLNGVTGATAETTTYDRIFSTMKAIQ 229
            N  L+ANF    RLKV QI+ TEY RQ++++G K VKES + +GW   N+PYVLVPREQLP G+ TV+++ +LSSL+V+CLDGNHR++AL  L G +FE+ECR YLHFD    VN+LARS+N  T ATA+TTTYDRIFS  KA++
Sbjct:    2 NQVLQANFLGVHRLKVKQIKGTEYTRQLSKVGVKSVKESIEARGWQSANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRLRALTILYGGEFELECRCYLHFDDAVMVNALARSVNNTTEATAKTTTYDRIFSCKKALE 146          
BLAST of mRNA_S-latissima_F_contig1045.406.1 vs. uniprot
Match: A0A6H5JXW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW4_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.830e-47
Identity = 88/163 (53.99%), Postives = 115/163 (70.55%), Query Frame = 0
Query:   76 GPNTGNDITNARLEANFCSTQRLKVGQIQRTEYNRQINQLGQKIVKESYKTKGWVEGNAPYVLVPREQLPSGRDTVFSAALLSSLKVFCLDGNHRVQALLDLEGADFEIECRLYLHFDCDETVNSLARS---------LNGVTGATAETTTYDRIFSTMKAIQ 229
            GP +     N  L+ANF    RLKV +I+ TEY RQ++++G K VKES + +GW   N+PYVLVPREQLP G+ TV+++ +LSSL+V+CLDGNHR++AL    G DFE+ECR YLHFD    VN+LAR+         +N  TGATA+TTTYDRIFS  KA++
Sbjct:   35 GPPSSAGSMNQVLQANFLGVHRLKVKRIKGTEYTRQLSKVGVKSVKESIEARGWQSANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRLRALTIFYGGDFELECRCYLHFDDAIMVNALARNDVSPEYIAGVNSTTGATAKTTTYDRIFSCKKALE 197          
BLAST of mRNA_S-latissima_F_contig1045.406.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.940e-45
Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 0
Query:   76 GPNTGNDITNARLEANFCSTQRLKVGQIQRTEYNRQINQLGQKIVKESYKTKGWVEGNAPYVLVPREQLPSGRDTVFSAALLSSLKVFCLDGNHRVQALLDLEGADFEIECRLYLHFDCDETVNSLARSLNGVTGATAETTTYDRIFS 223
            GP +     N   +ANF    RLKV QI  TEY RQ++++G K VKES + +GW   N+PYVLVPREQLP G+ TV+++ +LSSL+V+CLDGNHRV+AL  L G +FE+ECR YLHFD    VN+LARSLN  T ATA+TTTYDRIFS
Sbjct:   73 GPPSSAGSMNQVQQANFLGMHRLKVKQINGTEYTRQLSKVGVKSVKESIEARGWQGANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRVRALRILYGGEFELECRCYLHFDDAVMVNALARSLNNTTKATAKTTTYDRIFS 220          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1045.406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZC6_9PHAE4.560e-5060.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXW4_9PHAE1.830e-4753.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE2.940e-4559.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1045contigS-latissima_F_contig1045:116313..123679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1045.406.1mRNA_S-latissima_F_contig1045.406.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1045 116305..123679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1045.406.1 ID=prot_S-latissima_F_contig1045.406.1|Name=mRNA_S-latissima_F_contig1045.406.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=229bp
MPHPVHTLFARSTMSASPAAGGASAAGITAPATAAPTGTAAPTASAAQTG
TPAAAVGPTTPPAGQEEVAASSDYAGPNTGNDITNARLEANFCSTQRLKV
GQIQRTEYNRQINQLGQKIVKESYKTKGWVEGNAPYVLVPREQLPSGRDT
VFSAALLSSLKVFCLDGNHRVQALLDLEGADFEIECRLYLHFDCDETVNS
LARSLNGVTGATAETTTYDRIFSTMKAIQ
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