prot_S-latissima_F_contig1034.310.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1034.310.1
Unique Nameprot_S-latissima_F_contig1034.310.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length746
Homology
BLAST of mRNA_S-latissima_F_contig1034.310.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 8.530e-71
Identity = 276/844 (32.70%), Postives = 362/844 (42.89%), Query Frame = 0
Query:    1 MHTAAGAGTLESMELLISAGLSPKTKDQGGRTPLHHAS---AHGSAECVSFLCVIAGSTLLSRDKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---ARTVGDETLWRALQDGDRRRHYALTNDGFLCSRYRSDERATRSGAGRAVDVGRIMAVWERFFENAA-------------LVAVGSSLAGGSDGYSDDDEGRQYEPRAAMKGLERENNKGVCGLNGNGATVEAVGTHRRLAPARKGWVCGGGGXXXXXKG-------GGEC-RADDRRHLQSQEIQGPEMPGALATPRTRFCAWDVV--TDDNALDHNNFPY---LPPNELTSQRAG---DLRTQF-VGDTNETPCS-DDADL--FQTPNGGSGDWMWPTDDDRQGEAQPSFE--LPPKRETMDTEEATF-GCFPAHQGWTTCWDAASGSLYYWDPESGSSTWDV----TTVPAGAN---FSSEVWDPQQEAFFTVDGSGASRWL--SQSSPA--SFAARSDELWKGASAVNVSAAVDAEDHYSSAISQAAVPRPSQELEMAVS------SSSE-----DNDSFHAALSEEDVYGSGESWAGEGNREGL-------DCCAVKQSHPNARKLDENQGRYN---DVCGFLYAEEQSSYHVST---SQAEVA-EYGWQP-NGDIDRAGNSV---------------GAQFSPKSVTSTPNMGFEENVDGVGFFDSNNG-----EGHEQIELEGTIGDISKPEVQGEEESAPNTIGAES---TLARLPKWLLWCA-QPHGAI-----PYYVNEVTGASSWMLPPEAVVSSGGWLRAWSEEHQAGFYANHWTGRVTWE 736
            MHTAAG G +ES+ELL+SAGLSP+T+D  GRTPLHHA      G+A CVSFLCV+AGST+LSRD+ A                                         +   A   GD+ +  AL DGDRRRH   +N G L    R+ E       G  VD  RIMAVWERFFENAA             + AVG+   GG  G        Q       +G+ +    G     G     +     R      +    GGGG      G       GG C    D R  +S+       P  LA   +   A D+   T    L+ +       + P +   +R G   DL  Q  VG++  T  S DDADL  F TP GG G       +   G    + E   P  ++T    EA     +  H  W  CWDAAS S+YYWD  SG  +W+     T +  G     F S VWDPQ+EAFFT+D  GAS WL  S SSP   +          GA     S  V    +  ++ S+ +    S +  +A+       SSSE     D D+ +  +++ D      +W G+    GL       D  AV+Q  PN    + ++   N   D+ GF  A+E+ +   S    SQA    E   +P +GD    G  +                A    +S  +T   G     DG   FD+        + H+  +  G         V+G   S   +  AE+    L RLP W+ WC+  PH        PY+VNE TG SSW+LPP+AV  S GWLRAWSEEHQA F+AN WTG VTW+
Sbjct:    1 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSGAARCVSFLCVVAGSTVLSRDRTAGDTPLHFAVRARHGVCVEVLLSFAEGTSDILREANAKGETPLDLAAALSGDDGIVLALLDGDRRRHQPRSNGGKLSYLGRNVE-------GGTVDFQRIMAVWERFFENAARADLGGKKSSPDVISAVGTVGRGGYGGVE------QLVNTDETRGVGKLAEDGRWLGRGQPRATQTFDRDRHFVTTSE---LGGGGVGESQTGDRNGRWDGGWCVDTADSRTFRSRRTW---RPSGLADTSSIATAQDLARGTPPQHLERDGEDEHVDVAPLQSPHRRQGAKEDLGVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPASKDTNAAAEAAADNPYRRHGAWIACWDAASESIYYWDSNSGELSWNAPAPSTAIERGERLNGFPSPVWDPQREAFFTIDKDGASHWLVDSPSSPTWTTPVVEHRAATDGADGDIASLVVQDYTYDRTSASEESTTFSSWQQGLAIGAAAPEWSSSEVERDRDRDALNNTVNQVDEV---LAWDGQQLLAGLPYSFPMLDRQAVQQL-PNTCGDEYSKDDINGNDDLHGFFDAQEEHATRRSAPSFSQAGAGQECAVEPIDGDARADGRVLHLASGEEQQRCLRANAAAVVSESTQNTTTAGKGNQPDGNDVFDTEEQPSYLRDSHQDTDQNGLGA------VEGGTRSHDESAVAEAYDPALTRLPLWVQWCSYSPHDGDDTNNQPYFVNEETGESSWVLPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWD 815          
BLAST of mRNA_S-latissima_F_contig1034.310.1 vs. uniprot
Match: A0A6H5KHS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS3_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.180e-59
Identity = 250/828 (30.19%), Postives = 341/828 (41.18%), Query Frame = 0
Query:    1 MHTAAGAGTLESMELLISAGLSPKTKDQGGRTPLHHAS---AHGSAECVSFLCVIAGSTLLSRDKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---ARTVGDETLWRALQDGDRRRHYALTNDGFLCSRYRSDERATRSGAGRAVDVGRIMAVWERFFENAALVAVGSSLAGGSDGYSDDDEGR-QYEPRAAMKGLERENNKGVCGLNGNG---ATVEAVGTHRRLAPARKGWVCGGGGXXXXXKG-------GGEC-RADDRRHLQSQEIQGPEMPGALAT-PRTRFCAWDVVTDDNALDHNNFPYLPPNELTSQRA-GDLRTQF-VGDTNETPCS-DDADL--FQTPNGGSGDWMWPTDDDRQGEAQPSFE--LPPKRETMDTEEATF-GCFPAHQGWTTCWDAASGSLYYWDPESGSSTWDV----TTVPAGANFS---SEVWDPQQEAFFTVDGSGASRWLSQSSPASFAARSDELWKGASAVNVSAAVDAEDHYSSAISQAAVP-RPSQELEMAVSSSSEDNDSFHAA------------------------LSEEDVYGSGESWAGEGNREGLDCCAVKQSHPNA---RKLDENQGRYNDVCGFLYAEEQSSYHVSTSQAEVAEYGWQP-----NGDIDRAGNSVGAQFSPKS---------------VTSTPNMGFEENVDGVGFFD-----SNNGEGHEQIELEGTIGDISKPEVQGEEESAPNTIGAESTLARLPKWLLWCA-QPHGA----IPYYVNEVTGASSWMLPPEAVVSSGGWLRAWSEEHQAGFYANHWTGRVTWE 736
            MHTAAG G +ES+ELL+SAGLSP+T+D  GRTPLHHA       +A CVSFLC +AGST+LSRD+ A                                         +   A   GD+ +  AL + D RR    +N G L    R+ E       G  VD  RIMAVWERFFENAA   +G   +      +    GR +Y     +   +     G    +G         A  T  R          GGGG      G       GG C    D R+L+S+          LA  P  +    D   +D  +D    P LP   +  Q    DL  Q  VG++  T  S DDADL  F TP GG G       +   G    + E   PP + T    EA     +  H  W  CWDAAS S+YYWD  SG  +W+     T +  G   +   S +WDPQ+EAFFT+D  GAS WL           S   W     V   AA+D  D  ++++ Q   P R +   E    +S +   +  AA                        + E+  +   +  AG  +   +      Q+ PN    +  +++    +D+  F  A+E+ +   ST  +  A  G +      +GD       V     P+                  +T   G     DG+   D     S+  + H+  +  G +G +       +E S       +  + RLP W+ WC+  PH      + Y+VNE TG SSW+LPP+AV  S GWL AWSEEHQA F+AN WTG VTW+
Sbjct:   37 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSAAARCVSFLCAVAGSTVLSRDRTAGDTPLHFAVRARQGVCVEVLLSFAAGTNDILREANANGETPLDLAAALSGDDVILLALLEADGRRRQPRSNGGNLSYLGRNVE-------GDTVDFQRIMAVWERFFENAARADLGRKKSSPDVISAVGTVGRGEYGGVEQLVNTDETRAAGKLAKDGRWLGRGQPRATQTLDRDISFVTTSELGGGGGGESQSGDRNGRWDGGWCVDTADSRNLRSRSTSSVATARDLARGPPPQHLERDG--EDAHVDVA--PLLPVGPMRRQGVKDDLSVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPPIKATNAAAEAAADNPYRRHGTWIACWDAASESVYYWDSNSGELSWNAPGPSTAIERGNRLNGIPSPLWDPQREAFFTIDEDGASHWL-------VGYPSSPTWT-TPVVEHRAAMDGADGDTASLVQEYNPDRTTVSKESTTYTSWQQGSAVAAAAPEPSSSEVECDRDRGILGTTANQVEEDPAWDRQQPLAGFSHSLRMVDRQSIQTLPNTCGEKYTEDDVNGNDDLHEFFDAQEEHAARCSTPSSSHAGAGQECAVEPIDGDAGADNRVVHLASGPEQQRCLRANAAAVVSEYTQNTTTAGKGNQSDGIDLSDTDEQPSSGRDSHQDTDQNG-LGAVEGGTRFHDESSVVEAD--DLAMIRLPLWVQWCSYSPHDDDDTNLSYFVNEETGESSWVLPPDAVAESRGWLLAWSEEHQAHFFANQWTGNVTWD 842          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1034.310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHX5_ECTSI8.530e-7132.70WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KHS3_9PHAE1.180e-5930.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 29..58
e-value: 0.91
score: 18.6
coord: 64..94
e-value: 0.12
score: 21.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 64..87
score: 9.084
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 29..62
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..28
score: 8.95
IPR001202WW domainSMARTSM00456ww_5coord: 707..740
e-value: 17.0
score: 5.8
coord: 673..704
e-value: 5.1
score: 10.3
coord: 384..420
e-value: 1.6
score: 14.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 678..702
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..129
e-value: 1.9E-24
score: 88.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..120
NoneNo IPR availablePFAMPF13857Ank_5coord: 65..107
e-value: 6.5E-7
score: 29.5
NoneNo IPR availableGENE3D2.20.70.10coord: 384..423
e-value: 3.7E-6
score: 28.3
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 1..125
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..50
e-value: 1.1E-6
score: 29.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..119
score: 25.78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1034contigS-latissima_F_contig1034:112814..115253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1034.310.1mRNA_S-latissima_F_contig1034.310.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1034 112814..115253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1034.310.1 ID=prot_S-latissima_F_contig1034.310.1|Name=mRNA_S-latissima_F_contig1034.310.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=746bp
MHTAAGAGTLESMELLISAGLSPKTKDQGGRTPLHHASAHGSAECVSFLC
VIAGSTLLSRDKGAGDTPLHFAVRAGHSICAEVLLSHAREDLLHETNAEG
ETPLDVARTVGDETLWRALQDGDRRRHYALTNDGFLCSRYRSDERATRSG
AGRAVDVGRIMAVWERFFENAALVAVGSSLAGGSDGYSDDDEGRQYEPRA
AMKGLERENNKGVCGLNGNGATVEAVGTHRRLAPARKGWVCGGGGGDSGG
KGGGECRADDRRHLQSQEIQGPEMPGALATPRTRFCAWDVVTDDNALDHN
NFPYLPPNELTSQRAGDLRTQFVGDTNETPCSDDADLFQTPNGGSGDWMW
PTDDDRQGEAQPSFELPPKRETMDTEEATFGCFPAHQGWTTCWDAASGSL
YYWDPESGSSTWDVTTVPAGANFSSEVWDPQQEAFFTVDGSGASRWLSQS
SPASFAARSDELWKGASAVNVSAAVDAEDHYSSAISQAAVPRPSQELEMA
VSSSSEDNDSFHAALSEEDVYGSGESWAGEGNREGLDCCAVKQSHPNARK
LDENQGRYNDVCGFLYAEEQSSYHVSTSQAEVAEYGWQPNGDIDRAGNSV
GAQFSPKSVTSTPNMGFEENVDGVGFFDSNNGEGHEQIELEGTIGDISKP
EVQGEEESAPNTIGAESTLARLPKWLLWCAQPHGAIPYYVNEVTGASSWM
LPPEAVVSSGGWLRAWSEEHQAGFYANHWTGRVTWEPHDIEVDSG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR001202WW_dom
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom