prot_S-latissima_F_contig1023.209.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1023.209.1
Unique Nameprot_S-latissima_F_contig1023.209.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length761
Homology
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 2.790e-183
Identity = 431/784 (54.97%), Postives = 494/784 (63.01%), Query Frame = 0 
Query:   15 MAPRSHRLLVLAAS-LVCARSSAVFSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTGPLNQTISTXXXXXXXXXXXXXXXEPKDRQGGG--------------SWAGWATPCDPNGCAALIEGEQARTVEDYRRRAERMLYHMVGLEKRPAAEAGGRRALQRWEATLAAGEVSEGLRKEEREAVTKLEVLLKVYLQDEERREKRERAQLAAAGRCEA-----GVDGKG------RAAALGPCEDSAEEREAAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKNXXXXXXXXXXXXXXXAGARKVAGSGXXXXXXXXPDTPTAEDIMDLHWPLEAAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGAEPGLSLRE----------YVARRQQGSAAAAKGDP-TQTEQRKAEELRKTAVLGPVLNDGERGVYLGLTILLRMAGLPTLTPLRGLLAACDFARRQVAKGL--VAAAATCGLP--SPVQAALEGYRDRGLPGVSPHLDYRRYPTLRSLALRWDQFLLGNGKFLLVMWDAPIALWDFVFPELDDEHERPEAAMLREGIARAKASLETRNPDDAGGRGGR--RRNEETEAKRLLGLDLLGGEGAGFANLAEACFELHEGGYLYSLCPFKEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKHHRSMLFDGGSRCHNSKRRSSEVSVECGPDDALVEAEELEIGLYHLTMETPLACTEAILREMERRLEALGLSVP 755
            MAP  HRLLVL AS +V AR S++F+CDGGAT LE+++VNDDYCDC DG DETLTPACSHTG +RF C++TGPLN TI T     XXXXXXXXXX   +R G G              S A     CD NGC  ++E  +   +E YRR          GLE R  AE    R +  W+ATL AGEV E ++K+E +AV KLEVLLKVYLQDEER+E+RER QLA  GRCE      G DG+G       AAALGPCE++  EREAA K     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXX     +                T EDI+ L W ++ +A+                   XXXXXXXXX                      YV +RQ             +  +++AEELRKTA+LGPVLNDGERGVYLGLTILLR+AGLP L+PLRGL AA  F R + A+    +AA+ + GL   S V+ ALEGYRDRGLPG+SPHLDYRRYPTLRS+ L WD+FL GNGK LLVMWDAP+ALWDF FP  DD+HERPEAAMLREGIARA+A L+ + PD AG RGGR  RR EE+EAKRL GLDL  GEG+ FA LAE C +L EGGYLYSLCPFKE K                                          AG    R MLFDGGSRCHN+K+RS EVSV+CG +DALV AEE+EIG Y L +ETPLACTEA L E ER LEALGL  P
Sbjct:    1 MAPWQHRLLVLGASFVVSARGSSIFTCDGGATALEQNKVNDDYCDCLDGADETLTPACSHTGQARFACTDTGPLNHTIPTSRLWDXXXXXXXXXXXLVERGGVGERSIGAAAAAGXXXSAARATATCDRNGCERVLEDARTTAMEAYRRVE-------AGLEARKGAEERSERVVAEWQATLNAGEVDEEVQKQELKAVEKLEVLLKVYLQDEERKERRERVQLAEQGRCETASRREGGDGQGGAGRRAMAAALGPCEENTTEREAAAKVRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEEGAS-----------TVEDILGLEWVVDVSADDDDGAFRDRGTGGNREPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVKQRQXXXXXXXXXXXQAKAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDRAARAAAGLAASESWGLAPASTVRVALEGYRDRGLPGISPHLDYRRYPTLRSVVLHWDEFLHGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQEKKPDTAG-RGGRGKRRREESEAKRLSGLDL--GEGSRFAALAEKCLDLEEGGYLYSLCPFKEAKQDKHSLGRWRGWGPGGRGR-----------------------AGRGRDRVMLFDGGSRCHNNKQRSCEVSVQCGSEDALVAAEEIEIGTYRLRLETPLACTEAHLAEAERGLEALGLVRP 740
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 3.250e-123
Identity = 228/376 (60.64%), Postives = 259/376 (68.88%), Query Frame = 0 
Query:  386 LSLREYVARRQQGSAAAAKG-DPTQTEQRKAEELRKTAVLGPVLNDGERGVYLGLTILLRMAGLPTLTPLRGLLAACDFARRQVAKGL--VAAAATCGLP--SPVQAALEGYRDRGLPGVSPHLDYRRYPTLRSLALRWDQFLLGNGKFLLVMWDAPIALWDFVFPELDDEHERPEAAMLREGIARAKASLETRNPDDAGGRGGRRRN-EETEAKRLLGLDLLGGEGAGFANLAEACFELHEGGYLYSLCPFKEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKHHRSMLFDGGSRCHNSKRRSSEVSVECGPDDALVEAEELEIGLYHLTMETPLACTEAILREMERRLEALGLSVP 755
            LSL+ YV +RQ GSAAA  G    +  +++AEELRKTA+LGPVLNDGERGVYLGLTILLR+AGLP L+PLRGL AA  F R   A+    +AA+ + GL   S V+ ALE YRDRGLPG+SPHLDYRRYPTLRS+ LRWD+FL GNGKFLLVMWDAP+ALWDF FP  DDE+ERPEAAMLREGIARA+A L+ R PD AGG        EE+EAKRL GLDL  GEG+ FA LA  C +L EGGYLYSLCPFK+ K                                           G   +R MLFDGGSRCHN K+RS EVSVECGP+DALV AEE+EIG YHL +ETPLACTEA + E E  LEALGL  P
Sbjct:  144 LSLKAYVKQRQAGSAAANGGRGQAKAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDWAARAAAGLAASESWGLTPASTVRVALEDYRDRGLPGISPHLDYRRYPTLRSVVLRWDEFLHGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQERKPDTAGGXXXXXXXXEESEAKRLSGLDL--GEGSRFAALAGKCLDLEEGGYLYSLCPFKDAKQDKHSLGRWRGWGTGGRGLP-----------------------GRGRNRVMLFDGGSRCHN-KQRSCEVSVECGPEDALVAAEEIEIGTYHLRLETPLACTEAHVAEAELGLEALGLVRP 493
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A6G0XVH3_9STRA (Glucosidase 2 subunit beta n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVH3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.690e-11
Identity = 87/346 (25.14%), Postives = 135/346 (39.02%), Query Frame = 0 
Query:  417 ELRKTAVLGPVLNDGERGVYLGLTILLRMAGLPTLTPLRGLLAACDFARRQVAKGLVAAAATCGLPSPV----QAALEGYRDRGLPGVSPHLDYRRYPTLRSLALRWDQFL---LGNGKFLLVMWDAPIALWDFVFPELDDEHERPEAAMLRE-------GIARAKASLETRNPDDAGGRGGRRRNEETEAKRLLGLDLLGGEGAGFANLAEACFELHEGGYLYSLCPFKEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKHHRSMLFDGGSRCHNSKRRSSEVSVECGPDDALVEAEELEIGLYHLTMETPLACTEAILREMERRLE 748
            E R+   LGP+ N G  G    LT+ L   GL  L+P+RGL  A  +   Q    LV       LPSPV    Q++L+   +          DYR + +L    L   +F    L        +W+AP+ ++ ++FP LD      EA  LR+        I++A+ +++T    DA         +  +  R+L                + C       Y Y +CPF ++                                                  +M+F+ G RC N   RS+ V +ECG  D +V  EEL    Y +T+ TP AC++ +LR++E  L+
Sbjct:  280 ERRREDFLGPLFNGGREGKIAFLTMALHGVGL-ILSPIRGLYEAAWWIHFQWMH-LVHE----WLPSPVVNLWQSSLDVIEN----------DYRYHQSLWLRRLSQGRFFWWHLYTSWVFDTLWEAPVIVYQYLFPALDKSVVLAEAESLRKIIQDIDHDISQAQQTIDTLTTADA--------TDYGKCCRIL---------------KDQCISAKFEKYTYKVCPFNKVSQDRTSLGTWKRWESSS---------------------------------TMVFEDGDRCWNGPSRSAHVVLECGAADEIVRVEELATCRYTITLATPAACSQTLLRQLEDALK 553
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A7S0PLZ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PLZ7_MICPS)

HSP 1 Score: 65.9 bits (159), Expect = 1.290e-7
Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:   35 SAVFSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTG 85
            S+VF CDGGAT ++ SRVNDDYCDC DG DE  T AC++     F C N G
Sbjct:   55 SSVFVCDGGATTIDRSRVNDDYCDCDDGADEPGTSACAN---GEFHCRNRG 102
[Close]
BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A7R9TMQ8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TMQ8_MICPS)

HSP 1 Score: 63.5 bits (153), Expect = 1.690e-7
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:   33 RSSAVFSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTG 85
            R+S  FSCD G  VL+ S++ND+YCDC DGMDE  T AC++    RF C N G
Sbjct:   56 RASDRFSCDDGRVVLDPSKINDEYCDCADGMDEPGTSACAN---GRFHCRNRG 105
[Close]
BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A7S0ID62_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0ID62_MICPS)

HSP 1 Score: 64.3 bits (155), Expect = 3.890e-7
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0 
Query:   35 SAVFSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTG 85
            S+ F CDGGAT ++ SRVNDDYCDC DG DE  T AC++     F C N G
Sbjct:   63 SSAFVCDGGATTIDRSRVNDDYCDCDDGADEPGTSACAN---GEFHCRNRG 110
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: C1EJ26_MICCC (Glucosidase 2 subunit beta n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJ26_MICCC)

HSP 1 Score: 64.3 bits (155), Expect = 5.300e-7
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0 
Query:   35 SAVFSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTG 85
            S+ F CDGGAT ++ SRVNDDYCDC DG DE  T AC++     F C N G
Sbjct:   50 SSAFVCDGGATTIDRSRVNDDYCDCDDGADEPGTSACAN---GEFHCRNRG 97
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A830H7Y3_9CHLO (Glucosidase 2 subunit beta n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H7Y3_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 4.000e-6
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   29 LVCARSSAV---------FSCDGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTGPLNQTIST 93
            +VC++S AV            +  A  +   R+NDD+CDC DG DET TPACSH  H++F C N   + + IST
Sbjct:   39 VVCSKSQAVSQAVSHDRFLGSEKCAAFIPRHRINDDFCDCADGSDETETPACSHV-HAKFTCKNEAHVKKDIST 111
[Close]
BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A225WJA6_9STRA (Glucosidase 2 subunit beta (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJA6_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.040e-6
Identity = 62/135 (45.93%), Postives = 74/135 (54.81%), Query Frame = 0 
Query:   38 FSC--DGGATVLEESRVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTGPLNQTISTXXXXXXXXXXXXXXXEPKDRQGGGSWAGWATPCDPNGCAALIEGEQARTVEDYRRRAERMLYHM-VGLEKRPAAEAG 169
            FSC  DG A  L  SRVND++CDC DG+DE  T ACSH   + F C N G     I TXXXXXXXXXXXXXXX  KD +         + C PN CA+        +   +R+ AE  L  + +G EKR A   G
Sbjct:  238 FSCVVDGKAAKLPISRVNDEFCDCDDGLDEPGTSACSHVLKAEFHCENNGFFPGKIHTXXXXXXXXXXXXXXXXEKDGK---------SQC-PNTCAS--------SARKFRKEAEERLEVVKIGFEKRQATVKG 354
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BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Match: A0A397F9K8_9STRA (Glucosidase 2 subunit beta n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F9K8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.140e-5
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 0 
Query:   22 LLVLAASLVCA-------RSSAVFSCDGGATVLEESR--VNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTGPLNQTIST 93
            L +L A L+C+        S+ + + DG    L  S   VNDDYCDC DG+DE  T ACSH   S F C N G L+ ++ T
Sbjct:  251 LALLQALLLCSLVHETASASTCISALDGQVLDLRNSAHLVNDDYCDCVDGVDEPSTSACSHLPASMFHCRNEGILSLSVHT 331
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1023.209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FQB3_ECTSI2.790e-18354.97Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A6H5JF29_9PHAE3.250e-12360.64MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6G0XVH3_9STRA2.690e-1125.14Glucosidase 2 subunit beta n=1 Tax=Aphanomyces eut... [more]
A0A7S0PLZ7_MICPS1.290e-758.82Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7R9TMQ8_MICPS1.690e-754.72Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0ID62_MICPS3.890e-756.86Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1EJ26_MICCC5.300e-756.86Glucosidase 2 subunit beta n=1 Tax=Micromonas comm... [more]
A0A830H7Y3_9CHLO4.000e-641.89Glucosidase 2 subunit beta n=1 Tax=Pycnococcus pro... [more]
A0A225WJA6_9STRA8.040e-645.93Glucosidase 2 subunit beta (Fragment) n=1 Tax=Phyt... [more]
A0A397F9K8_9STRA5.140e-541.98Glucosidase 2 subunit beta n=6 Tax=Aphanomyces ast... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009011Mannose-6-phosphate receptor binding domain superfamilyGENE3D2.70.130.10coord: 609..735
e-value: 6.1E-18
score: 66.8
IPR028146Glucosidase II beta subunit, N-terminalPFAMPF12999PRKCSH-likecoord: 39..110
e-value: 1.6E-17
score: 63.9
IPR036055LDL receptor-like superfamilyGENE3D4.10.400.10coord: 30..112
e-value: 5.5E-5
score: 25.4
IPR036607Glucosidase 2 subunit beta-likePFAMPF13015PRKCSH_1coord: 618..741
e-value: 3.9E-9
score: 36.4
IPR026874Glucosidase 2 subunit betaPANTHERPTHR12630:SF1GLUCOSIDASE 2 SUBUNIT BETAcoord: 34..298
IPR026874Glucosidase 2 subunit betaPANTHERPTHR12630:SF1GLUCOSIDASE 2 SUBUNIT BETAcoord: 605..740
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 34..298
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 605..740
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..761
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availableSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 681..735

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1023contigS-latissima_F_contig1023:49105..79279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1023.209.1mRNA_S-latissima_F_contig1023.209.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1023 49105..79279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1023.209.1 ID=prot_S-latissima_F_contig1023.209.1|Name=mRNA_S-latissima_F_contig1023.209.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=761bp
PRCQVPKNIHCVCSMAPRSHRLLVLAASLVCARSSAVFSCDGGATVLEES
RVNDDYCDCTDGMDETLTPACSHTGHSRFRCSNTGPLNQTISTSRVWDGV
CDCCDGSDEPKDRQGGGSWAGWATPCDPNGCAALIEGEQARTVEDYRRRA
ERMLYHMVGLEKRPAAEAGGRRALQRWEATLAAGEVSEGLRKEEREAVTK
LEVLLKVYLQDEERREKRERAQLAAAGRCEAGVDGKGRAAALGPCEDSAE
EREAAEKVRAVRAAKRARRDAERAEAIDKASKANTKNKNNKNTTKNKNTR
MRDRGAVRDRGAGARKVAGSGGGGGGGGGPDTPTAEDIMDLHWPLEAAAE
GEGGRQRGEGRGGGGSAGAGGGDGQGKGGKGAEPGLSLREYVARRQQGSA
AAAKGDPTQTEQRKAEELRKTAVLGPVLNDGERGVYLGLTILLRMAGLPT
LTPLRGLLAACDFARRQVAKGLVAAAATCGLPSPVQAALEGYRDRGLPGV
SPHLDYRRYPTLRSLALRWDQFLLGNGKFLLVMWDAPIALWDFVFPELDD
EHERPEAAMLREGIARAKASLETRNPDDAGGRGGRRRNEETEAKRLLGLD
LLGGEGAGFANLAEACFELHEGGYLYSLCPFKEIKQMKQIKQMKQDRHSL
GKWRRWGPEPEPEHGGQGGEGGEGGRGAGGKHHRSMLFDGGSRCHNSKRR
SSEVSVECGPDDALVEAEELEIGLYHLTMETPLACTEAILREMERRLEAL
GLSVPIEGRGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009011Man6P_isomerase_rcpt-bd_dom_sf
IPR028146PRKCSH_N
IPR036055LDL_receptor-like_sf
IPR036607PRKCSH
IPR026874Glucosidase_2_bsu
IPR039794Gtb1-like