prot_S-latissima_F_contig102.183.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig102.183.1
Unique Nameprot_S-latissima_F_contig102.183.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length216
Homology
BLAST of mRNA_S-latissima_F_contig102.183.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.750e-68
Identity = 110/203 (54.19%), Postives = 141/203 (69.46%), Query Frame = 0
Query:    1 MKPLNDCLAHYMDRKKSDPTSPTWLLFHDTDEYLFPVNTSLAIPQALQAYNNTCCVLAKRVQYGSAGYRITPRGLTLENFLMHAPIKSSKENRLPKVVVNLNPSDPEVDAIKSPLPSMHGVNKKECKCDQASIKELRINHYLGSTGDFVDKTRRYWQENHSIDKVEKYLEDRDVNIVMSDAITHWACATREILARVIGGLDLD 203
            M PLN CL  +M R+  D  +P WLLFHDTDEY+ PV+TS+ I QAL  ++ TCCV   RV YG+ G+   P+GL LE FL HA +   K NRLPKV VNL+ + P +   +S L SMH  N + C+CD   + E+RINHYLGS GD++ KT+RYWQE +S DKVEK+L +RD+N   SD IT WACATRE+L+ V+ G DL+
Sbjct:  204 MTPLNLCLEEHMVRRLGDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMH--NGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLN 404          
BLAST of mRNA_S-latissima_F_contig102.183.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.250e-66
Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 0
Query:    1 MKPLNDCLAHYMDRK-KSDPTSPTWLLFHDTDEYLFPVNTSLAIPQALQAYNNTCCVLAKRVQYGSAGYRITPRGLTLENFLMHAPIKSSKENRLPKVVVNLNPSDPEVDAIKSPLPSMHGVNKKECKCDQAS-IKELRINHYLGSTGDFVDKTRRYWQENHSIDKVE-KYLEDRDVNIVMSDAITHWACATREILARVIGGLDLDTGERR 208
            MKPLN CL  +++R+ + D  + TW+LFHDTDEYL+P +TSL I  AL+ ++ TCC L  RVQYGSAG+   PRGL LENFLMH+       N LPKV+VNL+PS+PE+  ++ PL SMH     +C   ++S +  LRINHYLGS GD++D+T RYW+E    +    K +  RD+N   SD I HWACATRE+L R++ GLDL+ G  R
Sbjct:  281 MKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKGGER 491          
BLAST of mRNA_S-latissima_F_contig102.183.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 9.990e-66
Identity = 109/213 (51.17%), Postives = 142/213 (66.67%), Query Frame = 0
Query:    1 MKPLNDCLAHYMDRK-KSDPTSPTWLLFHDTDEYLFPVNTSLAIPQALQAYNNTCCVLAKRVQYGSAGYRITPRGLTLENFLMHAPIKSSKENRLPKVVVNLNPSDPEVDAIKSPLPSMHGVNKKECKCDQAS---IKELRINHYLGSTGDFVDKTRRYWQENHSIDKVE-KYLEDRDVNIVMSDAITHWACATREILARVIGGLDLDTGERR 208
            MKPLN CL   ++R+ + D  + TW+LFHDTDEYL+P +TSL I  AL+ ++ TCC L  RVQYGSAG+   PRGL LENFLMH+       N L KV+VNL+PS+PEV  ++ PL SMH  N + C C  +    + +LRINHYLGS GD++D+T RYW+     +    K +  RD+N   SD I HWACATRE+L R++ GLDL+ G  R
Sbjct:   69 MKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMH--NAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGGGER 279          
BLAST of mRNA_S-latissima_F_contig102.183.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 3.260e-57
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 0
Query:    1 MKPLNDCLAHYMDRKKSDP-TSPTWLLFHDTDEYLFPVNTSLAIPQALQAYNNTCCVLAKRVQYGSAGYRITPRGLTLENFLMHAPIKSSKENRLPKVVVNLNPSDPEVDAIKSPLPSMHGVNKKECKCDQASIKELRINHYLGSTGDFVDKTRRYWQENHSIDKVEKY-LEDRDVNIVMSDAITHWACATREILARVIGGLDLDTG 205
            M+PLN CL HY++RKK DP  +P+WLLFHD DEY++P +TS+ +  AL  + +TCC L +R+QYGS G+   PRGL +++F+ H    S   N  PKVVVNL P+  E D +  PL SMH    + C C     +E+ INHYLGS GD++++  RYW    + D    + L  RDVN  +SD ITHW+C+TRE+L RV  GLDL TG
Sbjct:  242 MEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHAN--PKVVVNLTPT--ESDPVAPPLKSMH--KAEGCACLDLK-QEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTG 441          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig102.183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KFX9_9PHAE1.750e-6854.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KB75_9PHAE2.250e-6651.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYE9_ECTSI9.990e-6651.17Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
D7FLX6_ECTSI3.260e-5748.79Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig102contigS-latissima_F_contig102:268264..272285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig102.183.1mRNA_S-latissima_F_contig102.183.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig102 263221..297851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig102.183.1 ID=prot_S-latissima_F_contig102.183.1|Name=mRNA_S-latissima_F_contig102.183.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=216bp
MKPLNDCLAHYMDRKKSDPTSPTWLLFHDTDEYLFPVNTSLAIPQALQAY
NNTCCVLAKRVQYGSAGYRITPRGLTLENFLMHAPIKSSKENRLPKVVVN
LNPSDPEVDAIKSPLPSMHGVNKKECKCDQASIKELRINHYLGSTGDFVD
KTRRYWQENHSIDKVEKYLEDRDVNIVMSDAITHWACATREILARVIGGL
DLDTGERRQTKNVSP*
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