prot_S-latissima_F_contig101.113.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig101.113.1
Unique Nameprot_S-latissima_F_contig101.113.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length462
Homology
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.860e-55
Identity = 104/143 (72.73%), Postives = 113/143 (79.02%), Query Frame = 0
Query:  243 GVWDAQEEEEWEFEEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTT 385
            GVW  Q+EE+WEFEEEVQ LEERLE AVK EDYKGA   RDELYRIHMDETS+VLSTNSAFYAAFTAKD DRMASLWMP+NDVMC+HPGD P+ G QAV RSWRSLF SGDGRFS+S+IK                CNEEVT+
Sbjct:  135 GVWAVQDEEDWEFEEEVQRLEERLENAVKNEDYKGATKCRDELYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVDRSWRSLFRSGDGRFSSSVIK----------------CNEEVTS 261          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A836CFM1_9STRA (SnoaL-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.910e-35
Identity = 66/133 (49.62%), Postives = 97/133 (72.93%), Query Frame = 0
Query:  251 EEWEFEEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEV 383
            EEW+ E +V  LE  L +AVK E Y  A+  RD L R+HMD+ S+VL+ N+ FY+AF+ K+ D+MASLW+ ++ V+CVHPG  P+ GH+AV ++WR +F+SGD  F +S+++P  +++ VRGT+A V C EEV
Sbjct:    9 EEWDVETKVAKLESSLSRAVKEERYAEASELRDALSRMHMDDYSAVLAANADFYSAFSKKNADKMASLWLASDAVLCVHPGQEPLVGHEAVTKAWRGMFASGDAAFKSSVVQPKGVRVSVRGTSAWVTCTEEV 141          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.380e-31
Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 0
Query:  311 DPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTT 385
            D DRMASLWMP+NDVMC+HPGD P+ G QAVARSWRSLF SGDGRFS+S+IKPT+++IRVRGTTA+VQCNEEVT+
Sbjct:    8 DADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTS 82          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S0UAM3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAM3_HEMAN)

HSP 1 Score: 123 bits (308), Expect = 9.040e-28
Identity = 62/138 (44.93%), Postives = 90/138 (65.22%), Query Frame = 0
Query:  251 EEWEFEEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTTGGS 388
            EE   E  V+ LE  LE A+++E +K A+  RDEL R+HMDE+S+VL TNS FYAAF+ KD D M  +W+ +  V C+HPG  P+ G+  +   W ++F + D  F ++ I+P  IK+ VRGT+A V C E+V+  G+
Sbjct:   96 EEGMIERMVEKLETSLESAIQQEYFKDASTIRDELSRMHMDESSAVLRTNSDFYAAFSTKDIDLMGKVWLNSPQVQCIHPGAKPLVGYDKILSMWTNMFQAKDKVFRSTDIRPDGIKVHVRGTSAYVMCCEQVSAPGA 233          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: L1K3M9_GUITC (UVR domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1K3M9_GUITC)

HSP 1 Score: 117 bits (293), Expect = 5.450e-25
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0
Query:  269 AVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTTGGS 388
            AVK E Y  A+  RDEL R+HMD+TS+VL TNS FY AF+ K+ + M ++W  +  V C+HPG  P+ G+  +   WR++F + D  F ++ I P+ +K+ VRGT+A V C EEV++ G+
Sbjct:  123 AVKNERYSEASTLRDELSRMHMDDTSAVLKTNSDFYNAFSTKNIELMGTVWHNSPHVQCIHPGAKPLLGYDNIVNMWRNMFQARDKAFKSTAITPSNVKVHVRGTSAFVTCTEEVSSPGT 242          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S2SU46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU46_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.410e-22
Identity = 46/107 (42.99%), Postives = 71/107 (66.36%), Query Frame = 0
Query:  277 GAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEV 383
             A LY+ EL+R+ MD+ S++LS N AFY AF+ KD   M  LW+ +    C+HPG  P+ GH+++  +W ++  S D RF  ++IKPT +++ V+G+TA + C EEV
Sbjct:   50 SAELYQKELFRLQMDDGSAILSANQAFYTAFSDKDMQSMRDLWLDSPQTCCIHPGQEPLLGHRSIMNTWDAMLRSQDTRFRNNMIKPTNVQLSVKGSTAWISCVEEV 156          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S0YXZ8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YXZ8_9CRYP)

HSP 1 Score: 101 bits (252), Expect = 2.000e-21
Identity = 47/124 (37.90%), Postives = 79/124 (63.71%), Query Frame = 0
Query:  259 VQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEE 382
            V+ LE+ L+ A+K+E +K A   R EL R+H D++S+VLS N+ FY A + ++   MA +W   + V C+HPG  P+ GH+ V   + ++F +     + + ++PT++++ VRGT+A V C EE
Sbjct:    7 VEKLEKSLDAAIKKEHFKDAQTLRKELSRLHGDDSSAVLSANADFYVALSTRNTTLMAEVWDDCDTVQCIHPGLRPVVGHRQVVDMFDNMFRTKQAAAANTRVRPTKVRVHVRGTSAFVLCTEE 130          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S0TUZ2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TUZ2_HEMAN)

HSP 1 Score: 104 bits (260), Expect = 1.870e-20
Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 0
Query:  259 VQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEE 382
            V  L++ L+ A+K+E +K A   R EL R+H+D++SSVLS NS FY A + ++   M  +W   + V C+HPG  PI G++ +   W  +F S +   + + ++PT++ + VRGT+A V C EE
Sbjct:  148 VGKLDQSLDAAIKQEHFKDAETLRSELSRLHIDDSSSVLSANSNFYLALSTRNTTLMREVWDDCDTVQCIHPGSRPIVGYKQILEMWEEMFRSKEAATTNTRVRPTKVCVHVRGTSAFVLCTEE 271          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S4MBM1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBM1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.730e-19
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  252 EWEFEEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGR--FSTSIIKPTEIKIRVRGTTAVVQCNEEVTT 385
            E E E +   LE  + +A +  ++  A   RDEL R ++D+  +VL  N  FY AF+AKD   M+ LW+    V+CVHP   P+ G  AV  SWR +F +G+G   F  ++++P+ +++ +RG+TA++ C+EEV T
Sbjct:  208 EAELEAKSGRLEAEIYEAAEGGEWDVAQAKRDELSREYLDDCGAVLQANLRFYRAFSAKDYGEMSKLWLHDASVLCVHPSHAPLVGASAVLGSWRRMFDTGEGAPAFRRNVVEPSRVRLSMRGSTAILTCDEEVYT 343          
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Match: A0A7S3VB37_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB37_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 9.420e-19
Identity = 49/130 (37.69%), Postives = 81/130 (62.31%), Query Frame = 0
Query:  256 EEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTNSAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFSSGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTT 385
            EE+V  +E  +  AV   DY+ A   + E+ ++H+D+  +VL  NSAFY AF+ KD + M +LW+     +C+HP    I G + V  S++ +F+ G+  F  + ++P+ I++ V+GTTA+V C+EEV T
Sbjct:  133 EEKVHEIETEMYNAVDAGDYEQAHAKKSEINQMHIDDCCNVLQANSAFYRAFSNKDYEAMENLWLHDASALCIHPSSTTIIGSKNVLSSFKEMFAGGNVAFQKNKMEPSNIRMSVKGTTAIVTCDEEVYT 262          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig101.113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L954_9PHAE5.860e-5572.73UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFM1_9STRA5.910e-3549.62SnoaL-like domain-containing protein n=1 Tax=Tribo... [more]
D7G2P0_ECTSI1.380e-3180.00SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S0UAM3_HEMAN9.040e-2844.93Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
L1K3M9_GUITC5.450e-2545.00UVR domain-containing protein n=2 Tax=Geminigerace... [more]
A0A7S2SU46_9STRA1.410e-2242.99Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0YXZ8_9CRYP2.000e-2137.90Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0TUZ2_HEMAN1.870e-2038.71Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S4MBM1_9STRA1.730e-1938.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3VB37_9STRA9.420e-1937.69Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..272
NoneNo IPR availableGENE3D3.10.450.50coord: 288..403
e-value: 9.4E-28
score: 98.9
NoneNo IPR availablePANTHERPTHR34957FAMILY NOT NAMEDcoord: 248..389
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 296..386
e-value: 1.1E-13
score: 51.6
IPR001943UVR domainPFAMPF02151UVRcoord: 256..285
e-value: 3.0E-5
score: 23.6
IPR001943UVR domainPROSITEPS50151UVRcoord: 256..291
score: 9.199
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 289..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig101contigS-latissima_F_contig101:474714..481075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig101.113.1mRNA_S-latissima_F_contig101.113.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig101 474316..490123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig101.113.1 ID=prot_S-latissima_F_contig101.113.1|Name=mRNA_S-latissima_F_contig101.113.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=462bp
MAMATQLHRARTTVTPPPTPPSTTASAAAGAALGGNAARRRRAWPSQQAS
RSSSSSSYYYYYCCLCAALALTTTSTAKAKVHAFVVNAPAAASLPRASAR
FRGSLSTSSSRGSRTSSDSSMVYGDARRARSSHALTSSCGLNGGGGGVGS
GPCSGFGFGLGGSFGGGVSVGVGGGGGTGGGGSRARAGQRGSVISTTTTT
TMMVAGGGSSSSSSSDSDGIVGSSSSHSSVDGVGAGVGSVGGGVWDAQEE
EEWEFEEEVQALEERLEKAVKREDYKGAALYRDELYRIHMDETSSVLSTN
SAFYAAFTAKDPDRMASLWMPTNDVMCVHPGDGPITGHQAVARSWRSLFS
SGDGRFSTSIIKPTEIKIRVRGTTAVVQCNEEVTTGGSGGGPHDTAASWL
SSMKAEIASRDAAKESAAASSSSSSSSSSATSAMEEAVSAQLAGGGGGGG
GGGGGGGGGKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037401SnoaL-like
IPR001943UVR_dom
IPR032710NTF2-like_dom_sf