prot_S-latissima_F_contig10.27.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig10.27.1
Unique Nameprot_S-latissima_F_contig10.27.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length203
Homology
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: D7FL42_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL42_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.360e-125
Identity = 166/188 (88.30%), Postives = 176/188 (93.62%), Query Frame = 0
Query:    1 MYFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFDTVCASKLLNALFGQ 188
            MYFVLDFYSGVLHVVLDD+WNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALF RGG +D MLLT G WKM+LAYWGIWNHRQAHQLKSKRPRWCTYLQ  GIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVT+LGR NLGS+FWIALFL LTA DT+CAS+LL+ +F +
Sbjct:   86 MYFVLDFYSGVLHVVLDDDWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQAHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTICASRLLSMVFAR 273          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A6H5L5I7_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I7_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 2.820e-123
Identity = 166/188 (88.30%), Postives = 175/188 (93.09%), Query Frame = 0
Query:    1 MYFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFDTVCASKLLNALFGQ 188
            MYFVLDFYSGVLHVVLDD+WNM VPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALF RGG +D MLLT G WKM+LAYWGIWNHRQAHQLKSKRPRWCTYLQ  GIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVT+LGR NLGS+FWIALFL LTA DTVCAS+LL+ +F +
Sbjct:  191 MYFVLDFYSGVLHVVLDDDWNMKVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQAHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTVCASRLLSMVFAR 378          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A6U5EGY9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EGY9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.240e-36
Identity = 70/172 (40.70%), Postives = 102/172 (59.30%), Query Frame = 0
Query:    6 DFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFY---RGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFD 174
            D YSGVLHVV D   N+ +P+L QP +EFQ+HH IPDD   + FV+  GDLN +  +   ++  L +   R G     L+  G+ K+ + Y+G ++HR AH      PR   +LQ++G+M+SP AH  HH PPHD ++CL+GV    V  + R+ L    W+A+FL  +  D
Sbjct:  152 DLYSGVLHVVFDHPDNIRLPVLGQPCLEFQWHHKIPDDLVRKDFVDVCGDLNTVALILFFVYGYLLFGPHREGVSGAALVLAGS-KLWMGYFGQFSHRSAHSYGKHCPRLAAWLQKRGLMISPRAHLSHHKPPHDTDFCLIGVCNPIVAAMRRVTLNRHAWLAVFLTWSVLD 322          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A7S3LC45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LC45_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.580e-34
Identity = 70/183 (38.25%), Postives = 102/183 (55.74%), Query Frame = 0
Query:    1 MYFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFDTVCASKLLN 183
            M+   DFYSGVLHVVLD   N+ +P+L QP +EFQ+HH IPDD   + FV+  GDLN +V   + L     Y       + +  G  K+ +AY+G ++H+ AH     R  + T+LQ+ G M+S   H  HH PP+D ++CL+G     +  L  L   +  W++LF V +  D V   KL+ 
Sbjct:  153 MFLGYDFYSGVLHVVLDHPDNIALPILGQPCLEFQWHHAIPDDLVRKDFVDVCGDLNVVV---MILAAINLYLLDLNSGVAMVIGGLKLWMAYFGQFSHKSAHAFGPARGGFATWLQKYGFMISCKDHMSHHKPPYDVDFCLIGFCNPAIDALRSLTTNNAAWLSLFFVWSILDLVGYVKLVE 332          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A8J2S8L3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8L3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.000e-33
Identity = 78/179 (43.58%), Postives = 97/179 (54.19%), Query Frame = 0
Query:    1 MYFVLDFYSGVLHVVLDDEWNMNVP---LLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALF-YRGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRL-NLGSVFWIALFLVLTAFD 174
            MY   DFYSGVLHV LDD  NM      +L Q  +EFQ+HH IP DG S+PF+    DLN IV + + L   L  Y  G    +   TG  K+  AY+G + HR AH  KSKRP+W  +LQ  G M   A H  HH PPHD+ +CL+G     V  L +L       W  L+L L+  D
Sbjct:  115 MYLGYDFYSGVLHVALDDPKNMQGVKSYILFQGCLEFQWHHAIPYDGASKPFIACCADLNIIVLILMVLNCGLLGYTSGTRAAL---TGL-KLFFAYFGQYCHRAAHTPKSKRPQWVQFLQSTGFMTPQAKHNGHHRPPHDENFCLIGKMDPAVNGLIKLCGTNDWVWFGLWLGLSCCD 289          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A7S1VG18_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VG18_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 2.890e-27
Identity = 71/185 (38.38%), Postives = 95/185 (51.35%), Query Frame = 0
Query:    1 MYFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLA-LFTALFY--RGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFDTVCASKLL 182
            MYF +D Y  VLHVVLD+   + +P +    +EFQ+HHHIP D   + FVE  GDLN +   H+  +F  L Y  R   +  + +T    K LLAY+G ++HR AH  +S RP     LQ   IML    HK HH         L G T   ++ L         W+  F+V+T FD V  +KLL
Sbjct:   81 MYFWVDLYGAVLHVVLDNPKFITLPGIDAGCLEFQWHHHIPSDITRKEFVEVCGDLNGVAAFHVVFIFGVLKYLLRWDFDTNLAMTLMGAKALLAYFGQYSHRMAHTPESLRPSIVRQLQAAHIMLPATIHKKHHDTYDGSFPILSGHTNGLISALLDKVPNDYAWLGTFVVMTLFDVVLFTKLL 265          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A7S3PX68_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX68_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.040e-26
Identity = 58/184 (31.52%), Postives = 95/184 (51.63%), Query Frame = 0
Query:    6 DFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLAL-FTALFYRGGCEDKMLLTTGAWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFL-GRLNLGSVFWIALFLVLTAFDTVCASKLLNALFG 187
            D  SG LH+V DD  N+ +P+L QP +EFQ HHH P D   R  ++ +GDLN + G+   L     F+     +         K+ +AY+G ++HR AH   S   ++   L++ G M+    H+ HH PPHD ++CL+G+    + F+   +     FW+  F  +  F     + +++ +FG
Sbjct:  101 DILSGFLHIVFDDTRNLCLPVLGQPCLEFQMHHHFPYDLVKRDLLDVLGDLNTVTGILAVLNICPYFFCDPWNNTTHRFMLGMKLFMAYYGQFSHRSAHTPSSVHNKYIEALRKIGFMIPLDVHRSHHRPPHDKDFCLVGICNPLINFMYHHVTRNRWFWMCGFFGVALFGIPLEAYVMDRVFG 284          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A7Y2FPK9_9DELT (Lipid_desat domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2FPK9_9DELT)

HSP 1 Score: 104 bits (260), Expect = 7.660e-24
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0
Query:    2 YFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTG---AWKMLLAYWGIWNHRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTFLGRLNLGSVFWIALFLVLTAFDTVCASKLLNALF 186
            YF +DFYSGVLHVVLD+   + +PL+  P +EFQ+HH  P D  +R   +  GDLN ++ +  A    LF   G      +  G   AW     Y   ++HR AH     RP+   ++QE  +++ PA H VHH         L G +   +  + R+     FW+ LF+VLTA D V    L++ ++
Sbjct:   93 YFYIDFYSGVLHVVLDNPRFVRLPLIGVPCVEFQWHHTFPYDISTRRLFDVWGDLNVLLLVKSAF---LFGICGFSTTTFMVAGVGYAW----GYANQFSHRLAHTAPRNRPKLAVWMQEHRLLMPPAVHHVHHNDHTQAFPVLSGHSRGLIQGMLRVIPNGYFWLVLFVVLTALDLVAICWLVDRIW 273          
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Match: A0A5F1XTR2_9LEPT (Kua-ubiquitin conjugating enzyme hybrid localization domain protein n=4 Tax=Leptospira TaxID=171 RepID=A0A5F1XTR2_9LEPT)

HSP 1 Score: 69.3 bits (168), Expect = 7.700e-11
Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 0
Query:    6 DFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYH-HHIPDDGCSR-PFVEGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTGAWKMLLAYWGIWN----HRQAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTW 148
            DF SG++H + D   +   P+   PA  F +  HH+   G +R  F+E  G+ N +V L + ++   F+        L+    W  LL  WGI+     H+ AHQ       +   LQ+  ++L PA HKVHHTPPHD  +C+   T W
Sbjct:   68 DFISGLVHFLGDSVGSETTPIFG-PAFIFPFRDHHVDPKGITRHDFIETNGN-NCLVSLPILVYYVFFWESEGVVSSLIAL-FWFFLL--WGIFATNQIHKWAHQ--DSPNAFIKTLQKYKLILGPAHHKVHHTPPHDTYFCI--TTGW 207          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig10.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FL42_ECTSI1.360e-12588.30Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L5I7_9PHAE2.820e-12388.30Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
A0A6U5EGY9_9STRA2.240e-3640.70Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3LC45_9STRA5.580e-3438.25Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8J2S8L3_9STRA8.000e-3343.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1VG18_9EUKA2.890e-2738.38Hypothetical protein (Fragment) n=1 Tax=Sexangular... [more]
A0A7S3PX68_9STRA5.040e-2631.52Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7Y2FPK9_9DELT7.660e-2434.57Lipid_desat domain-containing protein n=1 Tax=Myxo... [more]
A0A5F1XTR2_9LEPT7.700e-1133.56Kua-ubiquitin conjugating enzyme hybrid localizati... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019547B domain of TMEM189, localisation domainPFAMPF10520TMEM189_B_dmaincoord: 2..152
e-value: 5.5E-18
score: 65.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig10contigS-latissima_F_contig10:870161..883856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig10.27.1mRNA_S-latissima_F_contig10.27.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig10 869927..884674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig10.27.1 ID=prot_S-latissima_F_contig10.27.1|Name=mRNA_S-latissima_F_contig10.27.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=203bp
MYFVLDFYSGVLHVVLDDEWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFV
EGMGDLNFIVGLHLALFTALFYRGGCEDKMLLTTGAWKMLLAYWGIWNHR
QAHQLKSKRPRWCTYLQEQGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPV
TFLGRLNLGSVFWIALFLVLTAFDTVCASKLLNALFGQGGAHAAAAGLQQ
QL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019547TMEM189_B_dmain