prot_S-latissima_F_contig10.19.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig10.19.1
Unique Nameprot_S-latissima_F_contig10.19.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length163
Homology
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.280e-51
Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 0
Query:    1 MSFMDRIQVRWHN-GMIHIIRILILGTINCVGYRVYVQKVLMCRIKKHHKSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVNAGIDGLRSDKGLHWSR 162
            +SF+DRIQV   +    H I  L  G     G+      V    ++ H K+V D HAMH+YFLQLVPTVYR  +G T HSNQYSATEHLKH   H  +S GLPGVYF+YEVSPVQA VEE +KGFL+FLTGACGVVGGVYTILGLVN GIDGL      H SR
Sbjct:  293 LSFVDRIQVALESFNTTHTINTLTFGDQPPPGHASPKHAVASTVLEGHQKTVQDTHAMHQYFLQLVPTVYRLDNGETVHSNQYSATEHLKH--VHDGTSRGLPGVYFYYEVSPVQALVEEKRKGFLAFLTGACGVVGGVYTILGLVNTGIDGLLGMGKAHRSR 453          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A7S0B243_9STRA (Hypothetical protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B243_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.770e-25
Identity = 49/109 (44.95%), Postives = 74/109 (67.89%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVNAGIDGLRSDKG 157
            + + DA+AMH+Y+LQ+VPT Y+  D +T  SNQYS TEH +H      S+ GLPGV+F YEVS +   +EE ++G++ FLT  C +VGGV+T+ G+++  +    S+ G
Sbjct:   20 RPISDAYAMHQYYLQVVPTEYKHLDDTTIRSNQYSVTEHTRH--VAPGSNRGLPGVFFFYEVSALHVQLEEYREGWIRFLTSVCAIVGGVFTVGGMLDRYVYTKTSELG 126          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A482SKL0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKL0_9ARCH)

HSP 1 Score: 106 bits (265), Expect = 2.200e-24
Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 0
Query:   48 HKSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVN 146
            H+ V D H M++YF+++VPT Y+  +     SNQYS TEH+        S  GLPGVYF+YEVSP+QAF+EE K+ ++ FLT  C +VGG YT++GL++
Sbjct:  270 HRLVKDTHGMYQYFIKVVPTRYKPLNKPEVQSNQYSVTEHMS--TLAPGSGRGLPGVYFYYEVSPIQAFIEEKKRSWMHFLTSVCAIVGGAYTVMGLLD 366          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A836C905_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C905_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.780e-24
Identity = 49/110 (44.55%), Postives = 73/110 (66.36%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVNAGIDGLRSDKGL 158
            + + D++ M++Y++++VPT Y+   G +  +NQYS TEHLKH      S  GLPGVY +YE+S + A +EE + G L FLT  C +VGG+YT+LGL++  I  +R   GL
Sbjct:  312 RVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKH--VEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGL 419          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A7S3DNX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNX8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.280e-23
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEEN-KKGFLSFLTGACGVVGGVYTILGLVN 146
            K + D + M++Y+ Q+VPT Y+F +G+T ++NQYS TEHL+H         GLPGV+F YEVSP+   + E+ +KG++SF T  C VVGGV T++G+++
Sbjct:   73 KDITDTYGMYQYYFQVVPTTYKFMNGTTINTNQYSVTEHLRH--VDFGQVRGLPGVFFFYEVSPLHVVITESYRKGWISFFTSVCAVVGGVVTVMGMLD 169          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A1Z5JLU5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU5_FISSO)

HSP 1 Score: 103 bits (258), Expect = 2.830e-23
Identity = 49/109 (44.95%), Postives = 76/109 (69.72%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEEN-KKGFLSFLTGACGVVGGVYTILGLVNAGIDGLRSDK 156
            + V D+H M++Y+LQ++PT Y+F +G+T  +NQYS TEHL+H      S+ GLPGV+F YEVSP+   + E  +KG+++F+T  C VVGGV T +GL++  + G +  +
Sbjct:  288 RVVKDSHGMYQYYLQIIPTQYKFQNGTTIQTNQYSVTEHLRH--VPPGSNRGLPGVFFFYEVSPLHVEITEGYRKGWIAFVTSVCAVVGGVVTTMGLLDQYLFGRKDPR 394          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A6V2FLH9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FLH9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.060e-23
Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   51 VHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVN 146
            + DA+ M++Y++Q+VPT+YRF +G+   +NQYS TEHL+H    SR   GLPGV+F YEVS +   +EE +KG++ F T  C VVGGV+T +G+ +
Sbjct:  298 IEDAYGMYQYYIQVVPTLYRFLNGTEIQTNQYSVTEHLRHVPPASRR--GLPGVFFFYEVSALHVEIEEYRKGYIHFFTSVCAVVGGVFTFMGMAD 391          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A7S3H281_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H281_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.490e-22
Identity = 47/99 (47.47%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGST-FHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVN 146
            + V D H M++Y++++VPT Y+    +T   SNQY+ TEH+ H      S  GLPGVYFHYEVSP+QA  EE + G L F+T  C +VGG ++++GLV+
Sbjct:  304 RGVQDTHGMYQYYIKVVPTRYKALYSTTEIQSNQYAVTEHMSHLAP--GSGRGLPGVYFHYEVSPIQALFEEKRGGMLGFITSCCAIVGGAFSVMGLVD 400          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A7S1FY63_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY63_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.950e-22
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVN 146
            ++V + H M++Y+LQ+VPT Y   DG+T  +NQ S TEH++  K    S  G+PGV+F YEVSP     EEN++G++ F T  C +VGGVYT+LG+++
Sbjct:  301 RTVKNVHGMYQYYLQIVPTRYVKLDGTTITTNQMSVTEHMRIVKP--GSGRGMPGVFFFYEVSPFHVIFEENRRGWIRFFTSVCAIVGGVYTVLGMID 396          
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Match: A0A7S2K8A8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8A8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.640e-22
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   49 KSVHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSGLPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVN 146
            + + D H M++Y++Q+VPT+Y++ DGS   + Q+S TEHL+H         GLPGV+F YEVS +    EE +KG++ F T  C VVGGV+T +G V+
Sbjct:  125 RKIEDGHGMYQYYIQVVPTLYKYLDGSRVETFQFSVTEHLRH--VAPGQGRGLPGVFFFYEVSALHVEFEERRKGWIRFFTSVCAVVGGVFTFVGAVD 220          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig10.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL32_ECTSI1.280e-5160.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0B243_9STRA5.770e-2544.95Hypothetical protein n=2 Tax=Minutocellus polymorp... [more]
A0A482SKL0_9ARCH2.200e-2449.49Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A836C905_9STRA9.780e-2444.55Endoplasmic reticulum vesicle transporter-domain-c... [more]
A0A7S3DNX8_9STRA1.280e-2346.46Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5JLU5_FISSO2.830e-2344.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A6V2FLH9_9STRA3.060e-2348.96Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3H281_9STRA4.490e-2247.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1FY63_9STRA5.950e-2246.94Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2K8A8_9STRA6.640e-2244.90Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 44..145
e-value: 9.7E-28
score: 97.5
NoneNo IPR availablePANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 43..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..149
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 15..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig10contigS-latissima_F_contig10:699255..707618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig10.19.1mRNA_S-latissima_F_contig10.19.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig10 683724..707618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig10.19.1 ID=prot_S-latissima_F_contig10.19.1|Name=mRNA_S-latissima_F_contig10.19.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=163bp
MSFMDRIQVRWHNGMIHIIRILILGTINCVGYRVYVQKVLMCRIKKHHKS
VHDAHAMHRYFLQLVPTVYRFTDGSTFHSNQYSATEHLKHHKAHSRSSSG
LPGVYFHYEVSPVQAFVEENKKGFLSFLTGACGVVGGVYTILGLVNAGID
GLRSDKGLHWSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C