mRNA_S-latissima_F_contig992.17632.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: D7G9B1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B1_ECTSI) HSP 1 Score: 880 bits (2275), Expect = 2.700e-289 Identity = 723/1554 (46.53%), Postives = 827/1554 (53.22%), Query Frame = 1
Query: 55 LPGLQRICWGGWVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKALPVWLERWWTGGQSATGKRIRTTGYLPRFSLFRNPQNGP--LLLFVCFVRTFLKGLMCSSVCXXXXXXWTRATLAFXXXXXXXXXXXXXXXXXXSRSRVVTPGEPPRRSNNAAVIPPARNPGNQNQXXXXXXXXXXXXXXXXXXXXXXXXXXGGVPEARDGNQPAP----PLPPFHHL--GGLPERERG----------------------------------------EEAEAG-GGAVVPGLHREDDGHFPPAVGAG----VXXXXXXXXXXXXXXXXXXXXRG----VLGVLDSVEWFLAGVLEQLAAPPREEDADGEALFLWGWPAVGAAGGFLLFMGLLALFLQTIPYAVRLVPVGTPFGSPSTPPPSSAPASFFSSPFSYLRPLDGKATFRNPPPSSSYSSDSSYADYLADLYWTEGGLWSPSSPSPP----SWADRESVSRPSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--------GGHREGWVPGTLSPPVRIVPGSFFVGKGYGAGSAGPKKGFPLGGGGRTVGGWDRSYPSALGGMDVATVAGGXXXXXVAEENSSEXXXXXXXXXXXRENGGEKKNAPAPEIGPEKDSSEXXXXXXXXXXXXXXXDSADGLRESGATRSQRRKAGAAGGAGAGSGDRPEWLKSTLSSLRGPVIPGTTGLRVGVVFCETLQGHCLLAVGLILLSLVYSGVRLRLISKERQAETSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLVVGGDGAIAGEDHGXXXXXXXXXAWGRGQGGVVPGVGAAXXXXXXXXXXXXXGLWIGXXXXXXXXXXXXGGMLERDGQMGLDLKVLTVGVLELFVLPFWVGLAVDLFSLPLLASTIEARAVWAAANPFSSVAVHWGAGSMALSVVSCLGAEIARALRPDLLPAWARRRAEQGLEEMLVRMTHEPFLAQIRDFLISVIACPLALSLMVMVPTHFQAVLASLWPSGLAGKGFQGFEPVVLGIGEPTQGDRLGMDLVLFHFILPVVLEHLKIRGPVRRAACWVLTAACGLTGTKEKLLHPALVAGRGTGANDPEDLDDLPLPXXXXXXXXXXXXXXXXXXXEIAEEA-----------GE----EGGGARREG--------------DVGGRA--------------VEG-----------------------------------------GGEG---------VVEAVQASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAVGLPLDDDLPPLVAGAISCSTLASALSTLLRLRVAAGEYRRFVWNALMLAGKWFIIGILLVGALPGLTGLLVHDALRGPLPPAEETAALTWGKIWALGLVCVKLWARCVLAGAMPGEAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLVVTGQRELRFLQKTTPLAYLLLKAMWAGAMFGARKIKALHDLIRDDEYLEGLQLENMPPQGHS 4230
LPGL+R+ WG W+D+LGDWCGGV LMIGVMCLGPP VELALE V ++KALPV LERWW G + +R G RN Q+ P +L+ V R + L A A XXXXXXXXXXXXXXXX + + P + AA +PP G + XXXXXXXX GG DG A P+PP + G P RG AG GG P G P VG G V XX XXXX G VLG+L VEWFLAGVLEQLAAPPR+ED DGEALFLWGWPAVGAAG FL FM LL LF QT+PYA V G S P S+ SP+S+ FR+ SP P P S D SV RPSPAA XXXXXXXXXXXXXX R W ++SP R+ S W+ + G + VA XXXXXXXXX G ++ +G R GA AG GS R EW TL LRGPVIPGT+GLR G V +T+QGHC+LA+ L+LL +YS VRLR + R E +A G + E A+ RG+ G +PG+G XXXXXXXXXX XXXXXXXXXXXX MLERDGQMGLDLKVLT+G+LEL VLP WVG+A DLFSLPLLAST+EARA WA ANPFSS+A+HWGAGSMA+ VVSCLG EI RAL+PDLLP WA R AEQGLEE+LVRMT+E FLAQ+R FL+SV+A P AL+LMVMVPTH + LA S + + P+VLGIGEPTQGDRLGMDLV+ HFILPVV+EHLKIRGPVRRAACWVL+AACG TGT+ LLHPALVAGRG ANDP+DLDDL LP XXXXXXXXXX A GE EGG A G VGG A EG GGEG VVEA++ A LVC+AL ++PAA VL+PL+TGR++FAA+GLPLDDDLPPLVAG + C+ A ALS L+RL+VAAG++RR + NALMLAGKWF+IG LLVGALPGLTGLLVHDALRGPLPP EETAALTWGKIWALGLVCVKLWARCVLAGA+ EAWQGRLRR R NG RGVDFKFT+ EVCFPLLD VG++YFWP+LLNRFALPL+V QR+LR +QK P +LLLKA+W+ AMF K+KALHDLIRDDEYL GL+LENMPPQGH+
Sbjct: 229 LPGLERVGWGSWMDILGDWCGGVGLMIGVMCLGPPCVELALEFVNLVKALPVVLERWWLGDED----ELRVAGGP------RNEQDPPDDILVEVMLDRVRDRAL--------------HAAAAAHDXXXXXXXXXXXXXXXXXXATLPLP------AGRAAAVPPIGEEGGE------XXXXXXXXGEVEASGVPSVGGGGGDVGDYDGRAVAAAAEVPIPPERGVMDGEPPVVGRGTGGPVDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNAVPAGVGGNGAPQAGEHGVGVAVPPVGDGGEGRVLAVGGXXVAAGIQGXXXXEGEGGVHVVLGLLGRVEWFLAGVLEQLAAPPRDEDVDGEALFLWGWPAVGAAGSFLAFMALLLLFAQTVPYATFHVASGAVNRSRPLPLRQQRDTSW--SPYSFF--------FRD--------XXXXXXXXXXXXXXXXXXXXSPEGPFSPAPLRSTPDWSSVFRPSPAADAALFVLARPPHVETHGXXXXXXXXXXXXXXXXXXXXXPTASSRAWW---SISPSGRLARVSSSA--------------------------WETAAAGVSAGAGPSAVAPAAATASSCNTQQGSANXXXXXXXXXXXXXGGRRG------------------------------ETEGRRGDGAA------------AGGGSEGREEWYAMTLLFLRGPVIPGTSGLRAGAVIWQTVQGHCILALTLLLLLALYSVVRLRFVVLARHLEVAATAGNNGGVDSGLATGGNGVRGQREMGAGAGDPNNDAG-----------------GGVGDEAAAAVAVANAGNAFRRGRDGFIPGMGPRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLERDGQMGLDLKVLTMGLLELLVLPLWVGVAADLFSLPLLASTLEARAAWALANPFSSLALHWGAGSMAVGVVSCLGREIGRALKPDLLPPWANRPAEQGLEEVLVRMTNENFLAQLRSFLVSVVAYPAALALMVMVPTHCKGFLAPRLTSRFLPEFW--LSPMVLGIGEPTQGDRLGMDLVIVHFILPVVMEHLKIRGPVRRAACWVLSAACGATGTRGLLLHPALVAGRGAAANDPDDLDDLELPQPQAXXXXXXXXXXLPVLGNPQPPAXXXXXXXXXXDGELNDNEGGAADERGVXXXXXXXXXXDAYGVGGEAPRAVRXXXXXXXXXXEGIGRVEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGYERRGAFAHVVEAMRVYAAGSLVCIALAVVPAATVLLPLVTGRSLFAAMGLPLDDDLPPLVAGGLLCAAWAWALSALIRLQVAAGQHRRLLCNALMLAGKWFVIGALLVGALPGLTGLLVHDALRGPLPPTEETAALTWGKIWALGLVCVKLWARCVLAGAVRDEAWQGRLRRLRENGFRGVDFKFTMLEVCFPLLDVVGQFYFWPHLLNRFALPLLVANQRDLRVIQKGMPFVFLLLKALWSAAMFVVNKMKALHDLIRDDEYLVGLELENMPPQGHA 1638
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A6H5L475_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L475_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 7.090e-129 Identity = 199/270 (73.70%), Postives = 232/270 (85.93%), Query Frame = 1
Query: 3421 VVEAVQASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAVGLPLDDDLPPLVAGAISCSTLASALSTLLRLRVAAGEYRRFVWNALMLAGKWFIIGILLVGALPGLTGLLVHDALRGPLPPAEETAALTWGKIWALGLVCVKLWARCVLAGAMPGEAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLVVTGQRELRFLQKTTPLAYLLLKAMWAGAMFGARKIKALHDLIRDDEYLEGLQLENMPPQGHS 4230
+VEA + A LVC+AL ++PAA VL+PL+TGR++FAA+GLPLDDDLPPLVAG + C+ A ALS L RL+VAAG++RR + NALMLAGKWF+IG LL+GALPGLTGLLVHDALRGPLPP EETAALTWGKIWALGLVCVKLWARCVLAGA+ EAWQGRLRR R NG RGVDFKFT+ EVCFPLLD VG++YFWP+LLNRFALPL+V QR+LR +QK P +LLL+A+W+ AMF K+KALHDLIRDDEYL GL+LENMPPQGH+
Sbjct: 1 MVEATRVYAAGSLVCIALAVVPAATVLLPLVTGRSLFAAMGLPLDDDLPPLVAGGLLCAAWAWALSALFRLQVAAGQHRRLLCNALMLAGKWFVIGALLMGALPGLTGLLVHDALRGPLPPTEETAALTWGKIWALGLVCVKLWARCVLAGAVRHEAWQGRLRRLRDNGFRGVDFKFTILEVCFPLLDVVGQFYFWPHLLNRFALPLLVANQRDLRVIQKGMPFVFLLLRALWSAAMFVVNKMKALHDLIRDDEYLVGLELENMPPQGHA 270
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A7S2SRU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRU5_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.220e-25 Identity = 136/558 (24.37%), Postives = 226/558 (40.50%), Query Frame = 1
Query: 2551 MGLDLKVLTVGVLELFVLPFWVGLAVDLFSLPLLASTIEARAVWAAANPFSSVAVHWGAGSMALSVVSCLGAEIARALRPDLLPAWARRRAEQGLEEMLVRMTHEPFLAQIR-DFLISVIACPLALSLMVMVPTHFQAVLASLW-PSGLAGKGFQGFEPVVLGIGEPTQGDRLGMDLVLFHFILPVVLEHLKIRGPVRRAACWVLTAACGLTGTKEKLLH--PALVAGRGTGANDPEDLDDLPLPXXXXXXXXXXXXXXXXXXXEIAEEAGEEGGGARREGDVGGRAVEGGGEGVVEAVQASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAVGLPLDDDLPPLVAGAISCSTLASALSTLLRLRVAAGEYRRFVWNALMLAGKWFIIGILLVGALPGLTGLLVHDALRGPLP-PAEETAALTWGKIWALGLVCVKLWARCVLAGAMPGEAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLVVTGQRELRFLQKTTPLAYLLLKAMWAGAMFGARKIKALHDLIRDDEYLEGLQLEN 4209
+ L K+ V LEL V P +G V + + +++ R P ++ +HW G +A + E+ L P +L + + E R+ +E ++R L +++ +AL + VP +LA++W P A + G P+VL + EP +L ++L+LFH +LP+ +E +++R P+ A W L + G +LL P +A G L +P + A A + LAL+ +A +LVPL GR + + DL ++GA C L S + A + V L+ + + +LL+ A P L G L P P +ET A W + WALGLV +K+W R ++ G E W+ R+ F GI V F++ + EV P + + + +P + P V + ++ LQ+ ++ ++ R ++ +HD IRDD YL GLQL N
Sbjct: 637 LALATKIGLVLALELLVFPVVLGALVSASTAAPMGTSVHERLALFTQRPDLALFLHWLLGLVATWWQVFVALELRATLHPSILGNFLPDLVGEEENEAAARLANEALFKRLRASSLATLLLRDIALFTGLSVPL----LLATVWFPLNCAHRMVPGASPLVLRLSEPLMEVQLPLELILFHVLLPIAVERMQVRRPLSAALRWWLETTSRMFGLDAQLLRQVPRPMANTEAGL-----LQSQHMPAS------------------------------------------------LSACFALYGLSIAALALS--ASAALLVPLTLGRHLQSLWTWWPKHDLYSFLSGAGMCWGLISLAAGF----HGAARHWHHVHRWLVSLARCSALVLLLLAAAPLLLGCLFEQMFVIPFRLPLDETVATPWVQNWALGLVFLKIWIRVMVLGG--DEVWRRRIDEFYRQGIHAVPFEWAMKEVALPTIVTLADAMAFPVVFGHLVAPAVASSIQQHAALQRLAFPTFVGVRVASIAGHHAVRYLRNVHDKIRDDRYLLGLQLNN 1129
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A6H5L2V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V3_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.820e-20 Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 1
Query: 3067 MDLVLFHFILPVVLEHLKIRGPVRRAACWVLTAACGLTGTKEKLLHPALVAG 3222
MDLV+ HFILPVV+EHLKIRGPVR+AACWVL+AACG+TGT+ LLHPALVAG
Sbjct: 1 MDLVIVHFILPVVMEHLKIRGPVRKAACWVLSAACGVTGTRRLLLHPALVAG 52
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A6H5LAW9_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW9_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.600e-19 Identity = 53/104 (50.96%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 4 GGEGXXXXXXXXXXXAMLPGLQRICWGGWVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKALPVWLERWWTGGQSATGKRIRTTGYLPRFSLFRNPQNG 315
GG G LPGL+R+ WG W+D+LGDWCGGV LMIGVMCLGPP VELALE V ++KALP+ LE WW G + +R LPR + + NG
Sbjct: 521 GGGGPPSAVAGGGRGVSLPGLERVGWGSWMDILGDWCGGVGLMIGVMCLGPPCVELALEFVNLVKALPIVLECWWFGDEDG----LRGQAPLPRLNNDNDNVNG 620
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A836CLY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY3_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.520e-12 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 3892 WQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLVVTGQRELRFLQKTTPLAYLLLKAMWAGAMFGARKIKALHDLIRDDEYLEGLQLEN 4209
W R R RA GIRGV+F + + +CF +L+ VGE+YF PY L + PL++ L L + YL + + F + + LHD IRD+ +L G+QL N
Sbjct: 31 WARRFERVRARGIRGVEFNWAAYHICFRILNSVGEFYFVPYFLTKGVAPLLLEDPVTLDTLHRLGCPLYLAGHVLISLMGFVLKWMLKLHDTIRDEAFLVGVQLAN 136
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A1R3L600_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A1R3L600_ASPOF) HSP 1 Score: 82.8 bits (203), Expect = 4.880e-12 Identity = 140/592 (23.65%), Postives = 245/592 (41.39%), Query Frame = 1
Query: 2563 LKVLTVGVLELFVLPFWVGLAVDLFSLPLLASTIEARAVWAAANPFSSVAVHWGAGSMALSVVSCLGAEIARALRPDLLPAWARRRAEQGLEEMLVRMTHEPFLAQIRDFLISVIACPLALSLMVMVPTHFQAVLASLWPSGLAGKGFQGFEPVVLGIGEPTQGDRLGMDLVLFHFILPVVLEHLKIRGPVRRAAC-WVLTAACGLTGTKEKLLHPALVAGRGTGA----NDPEDLD----------DLPLPXXXXXXXXXXXXXXXXXXXEIAEEAGEEGGGARREGDVGGRAVEGGGEGVVEAVQASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAV-------GLPLDDDLPPLVAGAISCSTLASALSTLLRLRVAAGEYRRFVWNALML-AGKWFIIGI-------LLVGALPGLTGLLVHDALRGPLP-PAEETAALTWGKIWALGLVCVKLWARCVLAGAMP---GEAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLV----VTGQRELRFLQKTTPLAYLLLKAMWAGAMFGARKIKA----LHDLIRDDEYLEGLQLENM 4212
+KV + V+EL V P G +D+ +L +L ++I R + + +P +S ++HW G + + +S + + LR +L + R A+ + +P R L+SV + ++V +P LA PS P+ + I +P + D++LF +P +EH K R ++ W++ L T L P GR G N D D LP+ ++ EE+ DV G G V ++ L +L ++L + AA+++VP+ GRA+F A+ G+ +D L A +I C + S L+ + R + G + L+ KW I + + + +P L GLL + P+ P +E+ + WALGL+ +K+W R V+ M E+W+ + R + +G G+ + L E+ P++ ++ PY+ +R P++ + RF L LL ++ F A++ +A +H+ IRDD YL G +L N
Sbjct: 508 VKVAFLLVIELGVFPLMCGWWLDVCTLQMLGTSIAKRLEFFSLSPLASSSIHWLVGIIYMLQISIFVSLLRGVLRNGVL-YFLRDPADPNYNPFR-DLIDDPVHKHARRVLLSVAVYGSLIVILVFLPVKLAMWLA---PS---------IFPLDITIFDPFT--EIPADVLLFQICIPFAIEHFKPRATIKAVLRQWLIAVGWALGLTDFLLPRPDDNNGRENGELARRNRLHDHDAHQGVHVQQEQLPI---AIIAADNDGRDQVFANADVEEES-----------DVDDHV--GSEYGFV--LRIVLLLVLAWMSLLLFNAALIVVPVSLGRALFNAIPRFPVTHGIKCND----LFAFSIGCYLIWSLLAGI---RYSVGYIKTRRTGVLVSQVCKWCAIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDQMAPLVDESWRAKFERVKQDGFSGLRGLWVLQEIVIPIISKLLTALCVPYVFSRGLFPVLGYPLIINSAVYRFAW----LGCLLFSVVF----FCAKRFRAWFTNIHNSIRDDRYLIGRRLHNF 1050
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A061QT40_9CHLO (E3 ubiquitin-protein ligase MARCH6 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QT40_9CHLO) HSP 1 Score: 79.3 bits (194), Expect = 3.390e-11 Identity = 156/598 (26.09%), Postives = 231/598 (38.63%), Query Frame = 1
Query: 2527 GMLERDGQMGLDLKVLTVGVLELFVLPFWVGLAVDLFSLPLLASTIEARAVWAAANPFSSVAVHWGAGSMALSVVSCLGAEIARALRPDLLPAWA----RRRAEQGLEEMLVRMTHEPFLAQIRDFLISVIACPLALSLMVMVPTHFQAVLASLWPSGLAGKGFQGFEPVVLGIGEPTQGDRLGMDLVLFHFILPVVLEHLKIRGPVRRAACWV--LTAACGLTGTKEKLLHPAL----VAGRGTGANDPEDLDDLPLPXXXXXXXXXXXXXXXXXXXEIAEEAGEEGGGARREGDVGGRAVEGGGEGVVEAVQASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAVGLP-LDDDLPPLVAGA---ISCSTLASALSTLLRLR---VAAGEYRRFVWNALMLAGKWFIIGILLVGALPGLTGLLVHDALRGPLPPAEETAALTWGKIWALGLVCVKLWARCVLAGAMPG--------EAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNRFALPLVVTGQRELRFL-QKTTPLAYLLL-KAMWAGAMFGA------RKIKALHDLIRDDEYLEGLQLENMPPQ 4221
G LE Q+ + KVL + +LE V+P G +DL ++ +L + R+ +NP + ++W AG + + L A + LRP+ +P R RA++ + L E F AQ+ S +A A S++V+V QAV L +GF P + P + MD++LFH ++P++LEHL G AA L A + LL P VAG G P P + G GGAR AV + A+ ASL L A+V+ P+ GRA GLP DL +AG + AL ++ + AA R+ LM G + I LVG P L G+L+ + A ++ L + W LGL+C+KLW R V+A +P AW+ + + + E+ P+L PY L +P R L + PL +L A A A+ A R + + IRD+ YL QL N P+
Sbjct: 43 GALEAGSQVLVVAKVLCILLLERGVVPVLTGAWLDLCAMEVLGGGPQQRSALLRSNPLAVAGIYWFAGLGYMLYFTGLSASVVSLLRPEAIPGGLELLLRVRADED-PDALGAAAEEHFGAQLMSTATSFVAY--ATSMVVLVHLPVQAVHGCL----------EGFFPWRQRLASPPA--EVSMDILLFHVVVPLLLEHLHGAGGAEAAARCARKLLRALANALALQHLLRPEEGEEPVAGEGG-----------PGP---------------------SASTGSSEGGARS------AAVXWAQRQPLRLRXAAGASLAAGALLAAHGLALVM-PVAAGRAALRLAGLPGRGHDLYAGLAGLYGFLLAGRACQALWPMVHVADVCAAAASVLRWAKLTLMATGVFAI----LVGVCPLLLGVLLELLMLPARVSANKSPILFLYQDWVLGLLCLKLWHRVVMAVPLPEPGAGWAALRAWRLAFEDLQHGSLCEGTVRRLWAEITRPVLFAALTALAGPYALAHGLIPAA-------RLLPDRALPLVWLYCYHAAAAAALLAAVAAQARRWVSSWLQGIRDERYLITRQLNNFSPE 575
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A6P5GBV0_ANACO (probable E3 ubiquitin ligase SUD1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GBV0_ANACO) HSP 1 Score: 77.8 bits (190), Expect = 1.650e-10 Identity = 138/587 (23.51%), Postives = 239/587 (40.72%), Query Frame = 1
Query: 2563 LKVLTVGVLELFVLPFWVGLAVDLFSLPLLASTIEARAVWAAANPFSSVAVHWGAGSMALSVVSCLGAEIARALRPDLLPAWARRRAEQGLEEMLVRMTHEPFLAQIRDFLISVIACPLALSLMVMVPTHFQAVLA-SLWPSGLAGKGFQGFEPVVLGIGEPTQGDRLGMDLVLFHFILPVVLEHLKIRGPVRRAACWVLTAACGLTGTKEKLL-HPALVAGRGTGANDPEDLDDLPLPXXXXXXXXXXXXXXXXXXXEIAEEAGEEGGGARREGDVGGRA-VEGGGEGVVEAV-QASLASLLVCLALTMIPAAIVLVPLLTGRAMFAAVGLPLDDDLPPLVAGAISCSTL-ASALSTLLRLRVAAG-----EYRRFVWNALMLAG--KWFIIGI-------LLVGALPGLTGLLVHDALRGPLP-PAEETAALTWGKIWALGLVCVKLWARCVLAGAMP---GEAWQGRLRRFRANGIRGVDFKFTLFEVCFPLLDRVGEYYFWPYLLNR-----FALPLVVTGQRELRFLQKTTPLAYLLLKAMWAGAM------FGARKIKA----LHDLIRDDEYLEGLQLEN 4209
+KV + V+EL V P G +D+ +L +L +TI R + A PF+S A+HW G + + +S + + LR +L + R A+ + +P R L+SV + ++V +P LA +++P +A I +P + D++LF +P +EH K R ++ + + G + LL P G G D L +A E + G A D+G + V+ + V + L +L + L + AA+V++P+ GRA+F A+ LP + I C+ L A ++ + VA G +Y R +++L+ KW I + + + +P L GLL + P+ P +E+ + WALGL+ +K+W R V+ M E+W+ + R R +G + + E+ P++ ++ PY+ + F PL+V + + W G + F A++ LH+ IRDD YL G +L N
Sbjct: 522 IKVAFLLVIELGVFPLMCGWWLDVCTLKMLGATIAQRVEFFALAPFASSAIHWFVGIVYMLQISIFVSLLRGVLRSGVL-YFLRDPADPNYNPFR-DLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRLAPTIFPLDIA-------------IFDPFT--EIPADVLLFQICIPFAIEHFKPRETIKALLRYWFSVVGWALGLIDFLLPKPEENGGHENGNVVVARRDRL---------RAERGLHDQLLLQHVAAENHDWRGRAAENTDIGEDSDVDDQADSEYGFVLRIVLLLVLAWMTLLLFNAALVVIPISLGRAIFNAI-----PRLP--ITHGIKCNDLFAFSIGFYIIWGVATGVRYSVDYIRARRASVLLSQIWKWCTIVVKSSALLSIWIFVIPVLIGLLFELLVIVPIRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDQMAPLVDESWRRKFERVREDGFSRLRGLWVFREIVIPIITKLLTLLCVPYVFAKGIFPAFGYPLIVNSA---------------VYRFAWIGCLLFGTLCFCAKRFHVWCTNLHNSIRDDRYLIGRRLHN 1060
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Match: A0A4D9D9P7_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9P7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.650e-10 Identity = 79/273 (28.94%), Postives = 116/273 (42.49%), Query Frame = 1
Query: 3595 STLASALSTLLRLRVAAGEYRRFVWNALMLAGKWFIIGILLVGALPGLTGLLVHDALRGPLP-PAEETAALTWGKIWALGLVCVKLWARCVLAGAMPGE-AWQGRLRRFRANGIRGVDFKFTLFEVCFPLL-----------------DRVGEYY----------------FWPYLLNRFALPLVVTGQRE-----------LRFLQKTTPLAYLLLKAMWAGAMFGARKIKA----LHDLIRDDEYLEGLQLENMPPQGHSF*KRNGGTKKK 4263
S LA ALS L L R L+ AG+ ++ L + LP L GLL A+ P P +ET + + W LGLV +K+ RC+L G + + W+ + R ANG +DF +TL V P++ +R+G Y F P L R P ++E + L++ +AYLL W +++GAR + + LHD +RDD YL G++L N Q R GG +K
Sbjct: 692 SALARALSALHHLLPLLQPLRL----PLLRAGQAALLLALWLLLLPLLVGLLFELAVILPARVPMDETPLIPLYEAWVLGLVFLKISVRCLLLGLLGNDHPWKRKFERVGANGFWNLDFAWTLRHVVLPVICLFLSLLLPPYFFSKSVERLGYLYLRHVVLPAPLHPALPRFLPRFLLRVLAPAWHAQEQERDAYVSLVLYMIAGLKRMVYVAYLL----WRLSVYGARGLHSGFRHLHDKLRDDVYLVGVELRNHYGQEERMGGRGGGEGQK 956 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig992.17632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 20
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig992.17632.1 >prot_S-latissima_F_contig992.17632.1 ID=prot_S-latissima_F_contig992.17632.1|Name=mRNA_S-latissima_F_contig992.17632.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=1395bp MLPGLQRICWGGWVDLLGDWCGGVSLMIGVMCLGPPSVELALELVAVLKAback to top mRNA from alignment at S-latissima_F_contig992:119..50135+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig992.17632.1 ID=mRNA_S-latissima_F_contig992.17632.1|Name=mRNA_S-latissima_F_contig992.17632.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=50017bp|location=Sequence derived from alignment at S-latissima_F_contig992:119..50135+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig992:119..50135+ >mRNA_S-latissima_F_contig992.17632.1 ID=mRNA_S-latissima_F_contig992.17632.1|Name=mRNA_S-latissima_F_contig992.17632.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=8370bp|location=Sequence derived from alignment at S-latissima_F_contig992:119..50135+ (Saccharina latissima SLPER63f female)back to top |