mRNA_S-latissima_F_contig106.527.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: D7FJS4_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJS4_ECTSI) HSP 1 Score: 240 bits (612), Expect = 1.790e-71 Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = 3
Query: 747 VSLVVSSTYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRRR 1142
VSLVV+STYNGNGPIEDRHDIRQSPRGDFF V DGHGGWQAAELARKRLNIAAQTELK +LA N +QVK A+TQAFLRVEREYLYQVK AF+LGFGAVARTGACAIMAL+RDNRLFVANAGDCRAVLGRR+
Sbjct: 106 VSLVVASTYNGNGPIEDRHDIRQSPRGDFFVSVLDGHGGWQAAELARKRLNIAAQTELKTSLAGNPDQVKSAITQAFLRVEREYLYQVKAAFELGFGAVARTGACAIMALVRDNRLFVANAGDCRAVLGRRK 237
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A835YJE2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE2_9STRA) HSP 1 Score: 174 bits (441), Expect = 5.400e-47 Identity = 84/140 (60.00%), Postives = 106/140 (75.71%), Query Frame = 3
Query: 726 HKEAEASVSLVVSST--YNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRR 1139
H A + V S YN N PIEDRH ++++ +GD A V+DGHGGWQAA+ A+KRL Q EL N+LA +Q+ GAL++AFLRVERE+LYQV++AF+LGFG VAR+GACA+ A+IR + LFVANAGDCRAVLGRR
Sbjct: 42 HCSAALEAARVAPSIGEYNANDPIEDRHMVKETAKGDLLAAVFDGHGGWQAADFAQKRLASVVQLELSNSLAQTPDQISGALSRAFLRVEREFLYQVQSAFELGFGDVARSGACALFAMIRGDNLFVANAGDCRAVLGRR 181
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A7S2V900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V900_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.760e-32 Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 3
Query: 741 ASVSLVVSS--TYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNAE-----QVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRR 1139
A V L S+ TY+ N PIEDRH + + G FA V+DGHGGWQAAE A++ L + EL + + QV+GAL++AF RVER ++ + +F+ GFGAVAR G CA++AL+R R+F+ANAGDCRAVLGRR
Sbjct: 83 APVELNWSNFATYDANYPIEDRHFVAKMTGGHIFASVFDGHGGWQAAEYAQRHLEEYLEAELAHCATHPGQPLCDSQVQGALSRAFERVERGFITLIHQSFNAGFGAVARVGTCALVALVRGERIFIANAGDCRAVLGRR 222
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A4D9D382_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D382_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.770e-29 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 3
Query: 765 STYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNT-LADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRR 1139
STY+GN IEDRH+IR+ GD F GV+DGHGGWQ AE A L+ + EL N +EQV AL +AF R +R +++V AF++G G VA+ GACA+ LI+ + L+VANAGDCRAV+G+R
Sbjct: 355 STYSGNEFIEDRHEIREIVGGDIFCGVFDGHGGWQVAEYASVHLSKNLEIELANMGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKR 480
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A835YMD2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD2_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.870e-28 Identity = 64/115 (55.65%), Postives = 80/115 (69.57%), Query Frame = 3
Query: 789 IEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLG 1133
+EDRH + FA V+DGHGGWQ AE AR+ L + EL LA ++ AL +AFLR+ERE+L+ ++ A +LGFGAVA TGACAI AL+R + LFVANAGDCRAVLG
Sbjct: 1 MEDRHVVADDGN---FAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLG 112
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: K3WGS4_GLOUD (PPM-type phosphatase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGS4_GLOUD) HSP 1 Score: 122 bits (306), Expect = 8.500e-28 Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 3
Query: 765 STYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNAE--QVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGR 1136
+TY N P EDR +I+ + GD A ++DGHGGWQ AE RK L + EL+ T +A +V A+ +AF R +RE++ Q+ AF GFG VAR G+CA++AL+R+ L VANAGD RAVLGR
Sbjct: 61 ATYKSNAPSEDRFNIQSTANGDVCAAIFDGHGGWQVAEFVRKTLIGNIEKELRPTEQQHASPSEVTLAIQRAFGRTDREFMVQIAPAFHAGFGTVARCGSCALVALVREGTLHVANAGDSRAVLGR 186
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: F0WBP4_9STRA (Protein phosphatase 2C putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBP4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.850e-27 Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 3
Query: 741 ASVSLVVSSTYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELK------NTLADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRRRRRG 1151
+SV + S+ Y N PIEDR I+ P GD FAGV+DGHGGWQ + L + EL ++ D + + G+L +AF+R +R+ +V+ AF+LGFGAV R G+CA++ I +N L VANAGD R VLG R+ G
Sbjct: 96 SSVKMYSSAAYRANSPIEDRKIIKLYPNGDVFAGVFDGHGGWQVSNYLNTHLIDYVRQELGQNRQTGDSTLDLQDSICGSLQRAFMRTDRDLAARVRLAFELGFGAVGRCGSCALLVYIHENLLSVANAGDIRCVLGSRKVNG 238
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A0P1ASF7_PLAHL (Protein phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASF7_PLAHL) HSP 1 Score: 120 bits (300), Expect = 1.110e-26 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 3
Query: 735 AEASVSLVVSSTYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAAELARKRLNIAAQTELKNTLADNA-------------EQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGR 1136
+++ + V +++Y N PIED++ + + GD F V DGHGGWQ +E ARK L QTEL N ++V A+ +AF R +R+ + +V +AF LGFGAVAR G+CA +A + D+ L+VANAGD RAVLG+
Sbjct: 84 SKSRATRVSTASYKANFPIEDKYAMEMTSSGDVFVAVLDGHGGWQVSEYARKTLIGNVQTELANLYKSGTSEPAQGDEMFVSDDRVTAAIQRAFGRTDRDLMTEVASAFKLGFGAVARCGSCACLAYVHDDTLYVANAGDIRAVLGK 230
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A024GCJ0_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GCJ0_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.560e-26 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 3
Query: 744 SVSLVVSSTYNGNGPIEDRHDIRQSPRGDFFAGVYDGHGGWQAA--------ELARKRLNIAAQTELKNTLADNAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGRRRRRG 1151
SV + + Y N PIEDR ++ GD FAGV+DGHGGWQ + E R+R+N A T + L + + + L AF++++R+ QV+ AF+LGFGAV R GACA++ I DN L VANAGD R VLG R+ G
Sbjct: 64 SVKMYSRAAYRANSPIEDRSIVKSYSNGDLFAGVFDGHGGWQVSNYLHRQLIESVRQRVNQNATT--CDPLLGSQKNISEMLQDAFVQLDRDLAAQVQPAFNLGFGAVGRCGACALLVYIHDNVLSVANAGDTRCVLGSRKENG 205
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Match: A0A5D6XY68_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY68_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.420e-26 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = 3
Query: 765 STYNGNGPIEDRHDIRQSPRGDFFAGVYDGHG--------GWQAAELARKRLNIAAQTELKNTLAD---------NAEQVKGALTQAFLRVEREYLYQVKTAFDLGFGAVARTGACAIMALIRDNRLFVANAGDCRAVLGR 1136
+TY N PIEDR D++ S GD FA V+DGHG GWQ AE A K L Q EL + D + ++V A+ +AF R +RE + QV AF LGFGAVAR G+CA+ L+ ++ L+VANAGD RAVLG+
Sbjct: 100 ATYRANAPIEDRFDVQASLSGDVFAAVFDGHGKFLTSRPRGWQVAEYASKTLISNVQKELVHAFKDPERSAEAPASPKKVAAAIQRAFGRTDRELMAQVAPAFKLGFGAVARCGSCALFTLVHEDFLYVANAGDIRAVLGK 240 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig106.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig106.527.1 >prot_S-latissima_F_contig106.527.1 ID=prot_S-latissima_F_contig106.527.1|Name=mRNA_S-latissima_F_contig106.527.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=282bp MMRPAAGVVSRGLHRRRHTAALSAAPRATGAAGDRMVAALRPLTCALGPSback to top mRNA from alignment at S-latissima_F_contig106:501856..503006+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig106.527.1 ID=mRNA_S-latissima_F_contig106.527.1|Name=mRNA_S-latissima_F_contig106.527.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=1151bp|location=Sequence derived from alignment at S-latissima_F_contig106:501856..503006+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig106:501856..503006+ >mRNA_S-latissima_F_contig106.527.1 ID=mRNA_S-latissima_F_contig106.527.1|Name=mRNA_S-latissima_F_contig106.527.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=1692bp|location=Sequence derived from alignment at S-latissima_F_contig106:501856..503006+ (Saccharina latissima SLPER63f female)back to top |