mRNA_S-latissima_F_contig1058.491.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1058.491.1
Unique NamemRNA_S-latissima_F_contig1058.491.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A6H5KGL7_9PHAE (SGL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGL7_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 7.180e-96
Identity = 146/241 (60.58%), Postives = 181/241 (75.10%), Query Frame = 1
Query:   19 VPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASD-----------DICAR----PNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGYLYMTASDSILRIKVLVKPAP 696
            VPGSGE+V+CEHG+R VTRME NGT+T LATHFNGHRLNSPNDL  SKRGD+YFTDPP+G PL + DP FAA G  GVYR+R+E +EAA+A +           ++  +    PNGLAFSPD SK+YL  SS   P W+VYDV EDG+L+NRRLF D RP+++  G     PDG+KVDERGNIF++A GGVAV+SP G+HLGMI+   +F++NV +  DGYLYM AS+ +LR+KVL K AP
Sbjct:  141 VPGSGEVVMCEHGDRRVTRMENNGTKTPLATHFNGHRLNSPNDLAISKRGDIYFTDPPYGLPLRQKDPGFAAHGFGGVYRIRREVIEAAKAGEAGAREAAGAEPELMEKEFTWPNGLAFSPDFSKLYLAVSSPERPAWHVYDVGEDGELANRRLFLDARPMKEAYGVGV--PDGVKVDERGNIFAAAPGGVAVVSPGGQHLGMILTGGVFVANVALADDGYLYMAASERVLRVKVLTKAAP 379          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A7S3H6B4_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6B4_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.730e-54
Identity = 98/237 (41.35%), Postives = 145/237 (61.18%), Query Frame = 1
Query:   34 ELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKE----TMEAARASDDI------CARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHG--------PDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGYLYMTASDSILRIKVLVKP 690
            +L+ C+HG R ++ + +NGTR+ +ATHFN  RLNSPNDL+ S  G LYFTDPP+G               +GVY +RKE     ME+  A+D +       + PNGLAFSPD SK+Y++HS  + PF  V+DV+++G + N R+FFD + + +      +         PDGMKVD  GN+F++  GGV V+SP+G+ +G   ++   +SN+  G DG LY+T+ D I+R+ +  KP
Sbjct:   20 DLLACQHGERAISLLRENGTRSAVATHFNHSRLNSPNDLIMSPDGHLYFTDPPYGLITKSNGAVGQELPHSGVYMIRKEYLQIAMESGEATDQVWLMDGTMSSPNGLAFSPDFSKLYVSHSDKSAPFLKVFDVADNGLIKNGRVFFDAKELYEKECAMENDSACANVGLPDGMKVDINGNVFATGPGGVLVISPAGKLIGRFRLNRQ-VSNLAFGADGRLYITSKDLIVRVWIKTKP 255          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A534N9W9_9DELT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534N9W9_9DELT)

HSP 1 Score: 191 bits (485), Expect = 3.460e-54
Identity = 106/230 (46.09%), Postives = 134/230 (58.26%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDG-YLYMTASDSILRIKVLVK 687
            G  G+    SG LVL EHG+R + R+E +G +T+LA  + G RLNSPNDLVF   GDLYFTDPPFG P    DP+       GVYR+ KE        D     PNG+AFSPD  K+Y+T    N   W VYDV  DG L+N R+F D    +Q    P  GPDG KVD  GN+F +  GG+++ +P G HLG I +     SN+  G DG  LY+TA  +I RI++  K
Sbjct:  128 GSNGLTFDSSGRLVLAEHGDRRIARLENDGRKTILADRYAGKRLNSPNDLVFKSNGDLYFTDPPFGLPQAFDDPQ-KELPFQGVYRLSKEGKLTLLIKD--IKAPNGIAFSPDEKKLYVTDVDFNRAAWLVYDVKNDGTLANGRVFADASEWKQA---PFSGPDGFKVDREGNVFGARPGGISIFAPDGTHLGSIEIGGPT-SNLAWGDDGSVLYVTAGTAIYRIRLSAK 350          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: W7T4M9_9STRA (Gluconolactonase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4M9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 4.790e-54
Identity = 116/254 (45.67%), Postives = 151/254 (59.45%), Query Frame = 1
Query:   22 PGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADP--EFAAFGIAGVYRVRKETME-----AARASDDI------CARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDL----SNRRLFFDGRPIQQMT---GYPSHG-PDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDG--------YLYMTASDSILRIKVLVKPAP 696
            PGSG +V+CEHG R V+R+E NG+ T LATH+ G RLNSPNDLVF   GDLYFTDPP+G   ++ADP  E  +FG   VYRV KE ME     +AR S ++        RPNGLAFSPD + +Y+  S   +P W V+++     L       R+F D R  Q+     G    G PDG+KVDE GNI+++  GGV + SP GE LG I+  +    NV  GG          +LY+ A+D + RI +LV+PAP
Sbjct:  173 PGSGLVVMCEHGERRVSRLEANGSFTPLATHYQGRRLNSPNDLVFGPGGDLYFTDPPYGLNGLDADPARELESFG---VYRVSKEAMEQQVVSSARGSAEVQLVFDGLKRPNGLAFSPDFTHLYVGDSDAEDPHWVVFEMDASTGLVKGKEGARVFADARAYQERDDAGGKTRIGNPDGLKVDEDGNIWATGPGGVLIFSPQGERLGTILTGKKT-GNVAFGGKEKSRGGKGMFLYVCANDVVARIPILVRPAP 422          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A7C5EZE2_9BACT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C5EZE2_9BACT)

HSP 1 Score: 186 bits (471), Expect = 1.100e-52
Identity = 101/230 (43.91%), Postives = 135/230 (58.70%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGY-LYMTASDSILRIKVLVK 687
            G  G+     G+LVLC+HG+R + R+E +GT TVLA  +NGHR+NSPNDLVF+  GDLYFTDPPFG P    DP  A   + GVYRV ++       SD     PNG+AFSPD   +Y++        W  YDV  DG ++N R+FFD    ++    P  GPDG K+D  GN+F +  GG++V +P   HLG I   +   SNV  G DG  L++    S+ RI++  K
Sbjct:   80 GSNGLTFDEKGQLVLCKHGDRQIARLEADGTLTVLADRYNGHRINSPNDLVFTSNGDLYFTDPPFGLPKAFDDPNKAP--VQGVYRVLRDGKLTLLISD--IKAPNGIAFSPDEKTLYISDVDPKRAAWLAYDVKSDGTVTNGRVFFDATRWRKD---PFFGPDGFKIDTDGNLFGARPGGISVFAPDSTHLGDIETGQPT-SNVAWGEDGRTLFVAGGSSVYRIRLATK 301          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A1W9GF28_9BACT (Gluconolactonase n=1 Tax=Nitrospira sp. SG-bin1 TaxID=1827376 RepID=A0A1W9GF28_9BACT)

HSP 1 Score: 185 bits (470), Expect = 3.400e-52
Identity = 100/230 (43.48%), Postives = 135/230 (58.70%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDG-YLYMTASDSILRIKVLVK 687
            G  G+     G LVLC HG+R + R+E +GT TVLA  ++GHR+NSPNDLVF+  GD YFTDPPFG P    DP+ A   + GVYRV ++       +D     PNG+AFSPD   +Y++        W  YDV  DG ++N R+FFD    ++    P  GPDG KVD+ GN+F +  GG++V +P G HLG I       SNV  G DG  L++T   S+ RI++  +
Sbjct:  109 GSNGLTFDEKGRLVLCRHGDRQIARLEADGTVTVLADRYDGHRINSPNDLVFTSNGDFYFTDPPFGLPKAFDDPDKAP--VQGVYRVSRDGTLTLLITD--IKAPNGIAFSPDEKTLYVSDVDPKRAAWLAYDVKADGTVTNGRIFFDATRWRKD---PFFGPDGFKVDQNGNLFGARPGGISVFAPDGTHLGDIETGRPT-SNVAWGEDGRMLFVTGGSSVYRIRLTTR 330          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A2E1TWC0_9GAMM (Gluconolactonase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E1TWC0_9GAMM)

HSP 1 Score: 185 bits (470), Expect = 4.670e-52
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGY-LYMTASDSILRIKV 678
            G  G+ +   G L+L EHGNRVV+R+E NG+RT+LA +FNG RLNSPND V+   G LYFTDPP+G   +E DP        G+YR+   T E  +  +   +RPNG+A S D   +Y+ +S +N   WY Y V  DG LSN+R+FFD    Q  TG      DGMKVD  GNIF++  GGV V  P G HLG I  DE+  +NV  G DG  LYMTA   + RI++
Sbjct:  121 GSNGLNIDSEGRLLLMEHGNRVVSRIEANGSRTILADNFNGSRLNSPNDSVWHTNGWLYFTDPPYGMAGLENDP-MRELDFNGIYRLNPGTGEV-QLLEQSQSRPNGIALSVDERTLYVANSDENNKVWYSYXVGNDGRLSNQRVFFDVND-QDATG----AADGMKVDIDGNIFATGPGGVWVFDPGGNHLGTIKPDEVP-ANVGWGDDGSTLYMTARTGLYRIRL 339          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A1G3ZYZ4_9BACT (Gluconolactonase n=1 Tax=Verrucomicrobia bacterium GWF2_62_7 TaxID=1802432 RepID=A0A1G3ZYZ4_9BACT)

HSP 1 Score: 183 bits (465), Expect = 1.970e-51
Identity = 104/231 (45.02%), Postives = 130/231 (56.28%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQ-MTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGY-LYMTASDSILRIKVLVK 687
            G  G+ +   G  VLCEHG+R V R+EKNG +T LA  F G RLNSPNDLVF   GDLYFTDPP+G P +  DP        GVYR+ +         +     PNGLAFSPD   +Y+ +S      W  YDV  DG L   R+FFD  P+++   G P    DGMKVD RGN+F++  GGV + SP G+HLG +   E    N   G DG  LY+TA   + R+K   K
Sbjct:  110 GSNGLTLDTGGRPVLCEHGDRRVARLEKNGRKTTLADRFEGKRLNSPNDLVFKSNGDLYFTDPPYGLPKLNNDPA-KELPFNGVYRLARNGGLTLLTKE--LNFPNGLAFSPDEKTLYVANSDPQRAIWMAYDVKPDGTLGTGRVFFDATPLRKGRKGLP----DGMKVDCRGNVFATGPGGVLIFSPDGKHLGTLNTGEAT-GNCAWGDDGSTLYITADMFLCRVKTTTK 332          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A356FFN1_9BACT (Gluconolactonase (Fragment) n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFN1_9BACT)

HSP 1 Score: 180 bits (456), Expect = 3.150e-51
Identity = 101/234 (43.16%), Postives = 137/234 (58.55%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHG----PDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDG-YLYMTASDSILRIKVLVK 687
            G  G+ +  +G LVLC+HG+R V+R+ K+ +   LATH++G RLNSPND V+   GDLYFTDPP+G      DP        GVYR+ K        + D+  RPNG+ FSPD  K+Y+  S  ++  W VYDV +DG ++N ++FFD       T +   G    PDG+KVD++GNIF++  GGV V +P G HLG I   +   +N   G DG  LYMTA     RIK+  K
Sbjct:   15 GSNGLLLDPAGNLVLCQHGDRRVSRLRKDWSFEPLATHYDGKRLNSPNDAVYHSNGDLYFTDPPYGLEKRMDDPA-KELAFQGVYRLPKGAAAPVLLTKDV-TRPNGIGFSPDEKKLYVASSDPDKAIWMVYDVQDDGSIANGKVFFDS------TAWFKEGRLGLPDGLKVDQQGNIFATGPGGVLVFAPDGTHLGTIETGQKT-ANCGFGNDGSVLYMTADMFFCRIKLNTK 239          
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Match: A0A2E4LIR7_9GAMM (Gluconolactonase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4LIR7_9GAMM)

HSP 1 Score: 183 bits (464), Expect = 3.600e-51
Identity = 100/227 (44.05%), Postives = 141/227 (62.11%), Query Frame = 1
Query:    1 GLMGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVFSKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDICARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPIQQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFISNVVIGGDGY-LYMTASDSILRIKV 678
            G  G+ +   G L+L EHGNRVV+R+E +G+RT+LA ++ G+RLNSPND V+   G LYFTDPP+G   +E DP     G  G+YR+  E+ E  +  +   +RPNG+A S D   +Y+ +S +N   WY Y+V   G+LSN+++FFD   +    G  +   DGMK+D  GNIF++  GGV V  P G HLG I  DE+  +NV  G DG  LYMTA   + R+++
Sbjct:  121 GSNGLNLDXEGRLLLMEHGNRVVSRIETDGSRTILADNYRGNRLNSPNDSVWHSNGWLYFTDPPYGLAGLEQDP-LRELGFNGIYRLNPESGEV-QLLEQTQSRPNGIALSVDERTLYVANSDENNKVWYSYEVGNSGELSNQQVFFD---VNDQDGVGA--ADGMKIDVDGNIFATGPGGVWVFDPGGNHLGTIKPDEVP-ANVAWGDDGSTLYMTARTGLYRVRL 339          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1058.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGL7_9PHAE7.180e-9660.58SGL domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3H6B4_9STRA2.730e-5441.35Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A534N9W9_9DELT3.460e-5446.09SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
W7T4M9_9STRA4.790e-5445.67Gluconolactonase n=3 Tax=Monodopsidaceae TaxID=425... [more]
A0A7C5EZE2_9BACT1.100e-5243.91SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
A0A1W9GF28_9BACT3.400e-5243.48Gluconolactonase n=1 Tax=Nitrospira sp. SG-bin1 Ta... [more]
A0A2E1TWC0_9GAMM4.670e-5247.58Gluconolactonase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A1G3ZYZ4_9BACT1.970e-5145.02Gluconolactonase n=1 Tax=Verrucomicrobia bacterium... [more]
A0A356FFN1_9BACT3.150e-5143.16Gluconolactonase (Fragment) n=2 Tax=Planctomycetes... [more]
A0A2E4LIR7_9GAMM3.600e-5144.05Gluconolactonase n=1 Tax=Gammaproteobacteria bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1058contigS-latissima_F_contig1058:143447..145726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.0
Seed ortholog evalue7.8e-78
Seed eggNOG ortholog2880.D8LLF0
KEGG rclassRC00537,RC00983
KEGG koko:K01053
KEGG ReactionR01519,R02933,R03751
KEGG Pathwayko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220
KEGG ModuleM00129
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SMP-30/Gluconolaconase/LRE-like region
EggNOG OGs2S8F6@2759,COG3386@1
EC3.1.1.17
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons4
Model size1093
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1058.491.1prot_S-latissima_F_contig1058.491.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1058 143841..145720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815432.0652795-UTR-S-latissima_F_contig1058:143446..1438401622815432.0652795-UTR-S-latissima_F_contig1058:143446..143840Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1058 143447..143840 -
1693924880.5229461-UTR-S-latissima_F_contig1058:143446..1438401693924880.5229461-UTR-S-latissima_F_contig1058:143446..143840Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1058 143447..143840 -
1622815432.117984-UTR-S-latissima_F_contig1058:145720..1457261622815432.117984-UTR-S-latissima_F_contig1058:145720..145726Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1058 145721..145726 -
1693924880.6767228-UTR-S-latissima_F_contig1058:145720..1457261693924880.6767228-UTR-S-latissima_F_contig1058:145720..145726Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1058 145721..145726 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815432.0768056-CDS-S-latissima_F_contig1058:143840..1440711622815432.0768056-CDS-S-latissima_F_contig1058:143840..144071Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 143841..144071 -
1693924880.6430442-CDS-S-latissima_F_contig1058:143840..1440711693924880.6430442-CDS-S-latissima_F_contig1058:143840..144071Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 143841..144071 -
1622815432.0872512-CDS-S-latissima_F_contig1058:144374..1445391622815432.0872512-CDS-S-latissima_F_contig1058:144374..144539Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 144375..144539 -
1693924880.6526737-CDS-S-latissima_F_contig1058:144374..1445391693924880.6526737-CDS-S-latissima_F_contig1058:144374..144539Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 144375..144539 -
1622815432.098304-CDS-S-latissima_F_contig1058:144853..1450361622815432.098304-CDS-S-latissima_F_contig1058:144853..145036Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 144854..145036 -
1693924880.6608753-CDS-S-latissima_F_contig1058:144853..1450361693924880.6608753-CDS-S-latissima_F_contig1058:144853..145036Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 144854..145036 -
1622815432.108138-CDS-S-latissima_F_contig1058:145606..1457201622815432.108138-CDS-S-latissima_F_contig1058:145606..145720Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 145607..145720 -
1693924880.6686378-CDS-S-latissima_F_contig1058:145606..1457201693924880.6686378-CDS-S-latissima_F_contig1058:145606..145720Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1058 145607..145720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1058.491.1

>prot_S-latissima_F_contig1058.491.1 ID=prot_S-latissima_F_contig1058.491.1|Name=mRNA_S-latissima_F_contig1058.491.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=231bp
MGVQVPGSGELVLCEHGNRVVTRMEKNGTRTVLATHFNGHRLNSPNDLVF
SKRGDLYFTDPPFGFPLMEADPEFAAFGIAGVYRVRKETMEAARASDDIC
ARPNGLAFSPDSSKMYLTHSSDNEPFWYVYDVSEDGDLSNRRLFFDGRPI
QQMTGYPSHGPDGMKVDERGNIFSSASGGVAVLSPSGEHLGMIIVDEMFI
SNVVIGGDGYLYMTASDSILRIKVLVKPAP*
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mRNA from alignment at S-latissima_F_contig1058:143447..145726-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1058.491.1 ID=mRNA_S-latissima_F_contig1058.491.1|Name=mRNA_S-latissima_F_contig1058.491.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=2280bp|location=Sequence derived from alignment at S-latissima_F_contig1058:143447..145726- (Saccharina latissima SLPER63f female)
GGCTTGATGGGTGTCCAGGTGCCCGGATCGGGAGAGTTGGTGCTGTGCGA GCATGGCAATCGGGTAGTGACGCGGATGGAAAAGAACGGGACCAGGACGG TGCTGGCAACGCACTTCAACGTGAGACAGGGTCTATGCCTCCGCGGGAAC GCGTCGGTTGTGCGGTTTACAGTGATTGAGTGCGGGTGATCTGGGTGTTG GCGTGACATGCTGAGGTGTATTCTATGACGGAGCGACCGATGTTGGGTTG GGGCATGGTCATGACAGTCTGAGCACATGTCGGTGCCTCTGACGAGTTGC GTTTTTGACCGATGTAAACTATTTCGCTTGCTGGAAGGCTAAATTTAGCG TCTCTCTAAGCTTGTTGTTTCATTCGGTTCCTGTACGCCGGAAATAATTG AGAAACCACTGCCTGGAGGGACGCAAGGGAGTCTACCATATGCCAACGCC TTGCTGTCGGGCATGGGCAGCCTGACGAGCACGTTACACAATACAGTCGA TAGTTTAGTCCTCGTGTCAGCTCTTGGGGTGCTTAGCTGCATGCTTACTA ATCCTCGTGAATCACTTTCCGGGAGTCTTGGCGAAACAATTAAATCACGA AAGAAGTCCTCTGGTAGAAGTGCAAAAATAATCCAAAGAGAGCTAACCGC CTTTTCACGCCCGTCCATGACATTCGTTTGGCGCTGGCAGGGACATCGCT TGAACAGCCCCAACGACTTGGTTTTCTCCAAGCGCGGGGATCTGTATTTC ACGGACCCCCCCTTCGGTTTCCCTCTAATGGAAGCCGATCCAGAGTTTGC GGCCTTCGGCATCGCAGGAGTGTACCGCGTTAGAAAGGAGACAATGGAGG CCGCGAGAGCTTCTGATGATATCGTACCTGAGGCTGAGCTTGTGGAAAAA GGTATCTCGTTCCGGGAATACTTGCTTCGCGCAAGGGTTTGAGCCAGTGT GTATCGCAATGCTGTCGTCCCGAATATTGCACCGGCCACGGTTACTGTGG GGTGACATCGACGTCCGCGCTTCAGCGGAAACCAGGCCGGATTCTCGTTG TTTTTTCAACTTCGGACTTCACGCTGTCGATCGTTCGATCGAGGTGTAAG CCACGCTAAACATGCTACAATCGATTGCGCTTGTTGTACGGACAATTGTC AACATTCAACGCCCATCTTCCCTCTGACTTGGCAGAGTGTGCGCGGCCGA ACGGGCTGGCCTTTTCCCCAGACTCCTCCAAGATGTACCTTACCCATTCC TCGGACAACGAGCCATTTTGGTACGTGTACGACGTCAGCGAGGATGGGGA CTTATCTAACCGAAGGCTGTTCTTCGACGGACGACCGATTCAACAGATGA CGGTGGGGTGAATGAGACACGGGTGGGAGGGGCTGGACCTACATTGTTGT TTCTCAAAGATTGCGAGATCAGCGTCGGAAATCACCGATGCATAGGGCAC GCGGGATTACCTTATACCTCAGGCAGCTTGCGTACTTCGAAGTATTGGTA GAGACTCACACCGGAAAATCCCTCTCGTTCTATTTTCTGGGTGTCTCGTT TCGCCAACTGTTTTTTCCCCCCCATCCCACTTTGAAGCCGCCGGAAAGTC GTATGGTTTCTGTCGCATCAGTTCTCGTCCGACCCATCGCAATGCTCTGC CTCAGGGATATCCGTCGCATGGCCCGGATGGAATGAAGGTTGACGAACGG GGCAACATCTTCTCGTCTGCCTCCGGAGGTGTGGCCGTGTTATCGCCTTC TGGGGAGCACCTCGGGATGATTATCGTGGACGAAATGTTTATATCGAATG TGGTCATAGGCGGTGATGGGTACTTGTACATGACCGCCTCTGACAGCATC CTGAGGATCAAGGTGCTTGTCAAGCCAGCGCCGTAGGCGATACATACTGC AGCAGGACATTGTCGCGAGGCCAACAATTGCAGTGGATAGTGGGAAAAAC GGTGGTTTCCCCCGCGAATGAGGCGAAGCTGCGGAGTGTAGCTTAGTTTC CATGTTCAGCAGGCGAGATAATATGCACTCCCCGCCCCCAACAAGGGATG GGTGTGCAAAGCGTCGTCACTGTAGCTGTCGATGTCGTCCTGCTGATTGT ACTCGGTGTATCATACTGTTACGAATATAACTTAAGTAACAGTCCGGCGG TACGAAGGGCCTCTAAGCGTGCTTGCCCCAAGACTGTTACGGATTGGTAT CAGCCGAGAGGAGATGCCGAGAGGGATCACCTTGAGAAGGACTTCGAGAA CATCGCTATGCAGGAGCAGGAGGATCCCAA
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Coding sequence (CDS) from alignment at S-latissima_F_contig1058:143447..145726-

>mRNA_S-latissima_F_contig1058.491.1 ID=mRNA_S-latissima_F_contig1058.491.1|Name=mRNA_S-latissima_F_contig1058.491.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=1386bp|location=Sequence derived from alignment at S-latissima_F_contig1058:143447..145726- (Saccharina latissima SLPER63f female)
ATGGGTGTCCAGGTGCCCGGATCGGGAGAGTTGGTGCTGTGCGAGCATGG
CAATCGGGTAGTGACGCGGATGGAAAAGAACGGGACCAGGACGGTGCTGG
CAACGCACTTCAACATGGGTGTCCAGGTGCCCGGATCGGGAGAGTTGGTG
CTGTGCGAGCATGGCAATCGGGTAGTGACGCGGATGGAAAAGAACGGGAC
CAGGACGGTGCTGGCAACGCACTTCAACGGACATCGCTTGAACAGCCCCA
ACGACTTGGTTTTCTCCAAGCGCGGGGATCTGTATTTCACGGACCCCCCC
TTCGGTTTCCCTCTAATGGAAGCCGATCCAGAGTTTGCGGCCTTCGGCAT
CGCAGGAGTGTACCGCGTTAGAAAGGAGACAATGGAGGCCGCGAGAGCTT
CTGATGATATCGGACATCGCTTGAACAGCCCCAACGACTTGGTTTTCTCC
AAGCGCGGGGATCTGTATTTCACGGACCCCCCCTTCGGTTTCCCTCTAAT
GGAAGCCGATCCAGAGTTTGCGGCCTTCGGCATCGCAGGAGTGTACCGCG
TTAGAAAGGAGACAATGGAGGCCGCGAGAGCTTCTGATGATATCTGTGCG
CGGCCGAACGGGCTGGCCTTTTCCCCAGACTCCTCCAAGATGTACCTTAC
CCATTCCTCGGACAACGAGCCATTTTGGTACGTGTACGACGTCAGCGAGG
ATGGGGACTTATCTAACCGAAGGCTGTTCTTCGACGGACGACCGATTCAA
CAGATGACGTGTGCGCGGCCGAACGGGCTGGCCTTTTCCCCAGACTCCTC
CAAGATGTACCTTACCCATTCCTCGGACAACGAGCCATTTTGGTACGTGT
ACGACGTCAGCGAGGATGGGGACTTATCTAACCGAAGGCTGTTCTTCGAC
GGACGACCGATTCAACAGATGACGGGATATCCGTCGCATGGCCCGGATGG
AATGAAGGTTGACGAACGGGGCAACATCTTCTCGTCTGCCTCCGGAGGTG
TGGCCGTGTTATCGCCTTCTGGGGAGCACCTCGGGATGATTATCGTGGAC
GAAATGTTTATATCGAATGTGGTCATAGGCGGTGATGGGTACTTGTACAT
GACCGCCTCTGACAGCATCCTGAGGATCAAGGTGCTTGTCAAGCCAGCGC
CGTAGGGATATCCGTCGCATGGCCCGGATGGAATGAAGGTTGACGAACGG
GGCAACATCTTCTCGTCTGCCTCCGGAGGTGTGGCCGTGTTATCGCCTTC
TGGGGAGCACCTCGGGATGATTATCGTGGACGAAATGTTTATATCGAATG
TGGTCATAGGCGGTGATGGGTACTTGTACATGACCGCCTCTGACAGCATC
CTGAGGATCAAGGTGCTTGTCAAGCCAGCGCCGTAG
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