mRNA_S-latissima_F_contig105.430.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE) HSP 1 Score: 644 bits (1662), Expect = 2.040e-231 Identity = 296/339 (87.32%), Postives = 316/339 (93.22%), Query Frame = 2
Query: 266 MASDSSDTVLEGRALTLNPITLVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEETASAAAAGGADKTKT 1282
MASD+SD +LEGR+LTLNP TL+KDTVETV YHWKNKSINWPM+IYITLVH+AAV+GF TIQ CKWQTCLLAF+LWPITG+GITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHK+SETDADPHNAKRGFFFAHMGWLYVKKHP VI+AGRTL++ADLEADP+VMFQD +DPWFALFMCFVLP +VA WGEDFW+GFWVAGALRY VVLHFTWFVNSAAHMFGDHPYD KSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLID FA GLVTNRKRAVGAW+KLKERRDNEE +S G ADK K+
Sbjct: 1 MASDASDVLLEGRSLTLNPFTLIKDTVETVVYHWKNKSINWPMAIYITLVHMAAVLGFCTIQDCKWQTCLLAFVLWPITGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSLDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEERSSG---GAADKIKS 336
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A835YKG8_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG8_9STRA) HSP 1 Score: 548 bits (1413), Expect = 1.810e-193 Identity = 251/326 (76.99%), Postives = 277/326 (84.97%), Query Frame = 2
Query: 266 MASDSSDTVLEGRALTLNPITLVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEETA 1243
M + S ++ R LTLNPITL +DT E VAYH+K +INWPM YITLVHVAAVVG + WQT L AFILWPITG+GITGGVHRLWAHRSYDAHW+VRV++MLINSMANQGSIYHW+RDHRVHHKHSETDADPHNA+RGFFFAHMGWLYVKKHPAVI AGRTL+F+DLE DPVVMFQD++DPWFALFMCF PGLVAK WG++FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD SWP+ENP VS+ ++GEGWHNWHHKYPFDYAASEFGV Q+NPTK+ ID AA GLVT RKRA GAW KLK+RRD ETA
Sbjct: 1 MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDA-SWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETA 325
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA) HSP 1 Score: 541 bits (1395), Expect = 1.840e-190 Identity = 244/320 (76.25%), Postives = 273/320 (85.31%), Query Frame = 2
Query: 290 VLEGRALTLNPITLVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEETASA 1249
+++ R +TLNPI+L +DTV +HW+ + NWPM IYITLVHVAA++G + W+T LLAF LWPI+G+GITGGVHRLWAHRSY+AHWSVRVF+MLINS+ANQGSIYHWSRDHRVHHKHSETDADPHNA+RGFFFAHMGWLYVKKHP VI AGRTL+F+DLE DPVVMFQDR+DPWFALFMCF PGLVAK+ WGE+FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD SWP+ENP VSI A+GEGWHNWHHKYPFDYAASEFGV+ QFNPTK+ ID A GLV+ RKRA GAW KLKERRD E SA
Sbjct: 18 IMKQRHMTLNPISLTRDTVAACRHHWREGTFNWPMGIYITLVHVAAIIGVMNVPAASWKTQLLAFALWPISGLGITGGVHRLWAHRSYEAHWSVRVFLMLINSIANQGSIYHWSRDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPEVIAAGRTLDFSDLERDPVVMFQDRLDPWFALFMCFFFPGLVAKYGWGENFWVGFWVAGALRYCWVLHCTWCVNSAAHMFGDHPYD-NSWPAENPVVSILAVGEGWHNWHHKYPFDYAASEFGVAAQFNPTKLFIDACANVGLVSKRKRATGAWEKLKERRDEAEDGSA 336
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A4D9CQB7_9STRA (FA_desaturase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB7_9STRA) HSP 1 Score: 489 bits (1258), Expect = 6.610e-170 Identity = 214/303 (70.63%), Postives = 247/303 (81.52%), Query Frame = 2
Query: 329 LVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEE 1237
L +D V + YH+K ++NWPM IY+ L H+AA +G +I CKWQT L AFILWPITG+GIT GVHRLWAHRSY A R+ +ML NS+ANQGSIYHWSRDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHP V+E G+ L+F+DL ADPVV FQ DPWFA FMCFV+P LVA++ WGE FWN FWVAG LRYC+VLHFTW VNSAAH++GDHPYD WP+ENP VS+ AIGEGWHNWHH+YP+DYAASEFG+S QFNPTK ID FAA G+V+NRKRA GAWAKL+E R +E
Sbjct: 5 LARDAVSALVYHYKEGNLNWPMIIYLVLAHLAAYMGLVSIPSCKWQTLLEAFILWPITGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVAGGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISRQFNPTKAFIDFFAAIGMVSNRKRATGAWAKLRESRAKDE 307
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK) HSP 1 Score: 487 bits (1253), Expect = 1.780e-169 Identity = 217/303 (71.62%), Postives = 252/303 (83.17%), Query Frame = 2
Query: 329 LVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEE 1237
L+KD+V T YH K+ ++NWPM IYI LVHVA G I +WQT L AF LWPI+G GITGGVHRLW+HRSY A++ R F ML NS+ANQGSIYHW+RDHRVHHKHSETDADPHNA RGFFFAHMGWL VKKHP V++AGR L+F+DL+AD VMFQ ++DPWF LFMCFV P LV + WGEDFW GF+VAGA+RY VLH TW VNSAAH++GDHPYD +SWP+ENPFVS+ A+GEGWHNWHHKYPFDY+ASEFGVS+QFNPTKM+ID+ AA G+VT+RKRA GAW KLKE+RD EE
Sbjct: 6 LIKDSVTTSVYHLKHGNVNWPMLIYIALVHVAGFYGLMLITSSQWQTLLWAFTLWPISGFGITGGVHRLWSHRSYKANFIFRFFTMLANSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVVKAGRELDFSDLDADWTVMFQKKLDPWFTLFMCFVFPALVGTYGWGEDFWTGFYVAGAVRYIYVLHVTWLVNSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKEKRDREE 308
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S2UX82_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX82_9STRA) HSP 1 Score: 485 bits (1248), Expect = 7.970e-169 Identity = 218/301 (72.43%), Postives = 249/301 (82.72%), Query Frame = 2
Query: 332 VKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNE 1234
+K+ ++T YH+K ++NWPM +YITLVHVAA VG T+ C WQT L AFILWPI+G GITGGVHRLW+HRSY A R +ML NS+ANQGSIYHWSRDHRVHHKHSETDADPHNA RGFFFAHMGWL VKKHP VI+AG+ L+F+DL ADPVV+FQ R DPWFALFMCFVLPGLV WG++FWNG+WVAGALRY VLH TW VNSAAH++GDHPYD KSWP+ENP VS A+GEGWHNWHHKYPFDYAASE+G+ QFNPTK+LIDV A G V+ RKRA GAW KLK+RR +E
Sbjct: 6 IKNALDTCVYHYKEGNVNWPMVVYITLVHVAACVGIWTVPKCTWQTLLWAFILWPISGFGITGGVHRLWSHRSYKARLPYRFVVMLANSIANQGSIYHWSRDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVIKAGKELDFSDLLADPVVVFQKRTDPWFALFMCFVLPGLVCT-LWGDNFWNGYWVAGALRYVYVLHCTWLVNSAAHLYGDHPYDPKSWPAENPMVSYAALGEGWHNWHHKYPFDYAASEYGLMAQFNPTKVLIDVCAMVGQVSQRKRATGAWEKLKDRRASE 305
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S1ZS88_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1ZS88_TRICV) HSP 1 Score: 471 bits (1212), Expect = 5.000e-163 Identity = 211/305 (69.18%), Postives = 248/305 (81.31%), Query Frame = 2
Query: 329 LVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEETA 1243
+V+D V +H+K +INWPM IYI+LVHV A VG TI C +T L AFILWPI+G GIT GVHRLW+HRSY+A RVF+ML NS+ANQGSI+HW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL+VKKHP V++AGR L+F DL DPVVMFQ ++DPWF L+M +V P VA + WGE+FWNGF+VAGALRY VVLHFTWFVNSAAH++GDHPYD S+P+ENPFVS CAIGEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID+ AA GLV RKR AWA K RR+ + A
Sbjct: 7 MVRDIPSLVMHHYKEGNINWPMGIYISLVHVVAFVGLFTIPKCSAETLLWAFILWPISGFGITVGVHRLWSHRSYEAALPARVFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVKAGRELDFTDLSEDPVVMFQKKLDPWFTLYMSYVFPAQVASYFWGEEFWNGFFVAGALRYAVVLHFTWFVNSAAHLYGDHPYDVLSYPAENPFVSYCAIGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMMAAVGLVWGRKRGTAAWAMGKARRERDRAA 311
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S2UMM7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMM7_9STRA) HSP 1 Score: 469 bits (1207), Expect = 2.870e-162 Identity = 203/304 (66.78%), Postives = 247/304 (81.25%), Query Frame = 2
Query: 323 ITLVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNE 1234
I + +D + V+ HWK+ ++NWPM IYITLVH+ A VG ++Q C T + AFILWPI+G GIT GVHRLW+HRSY+A VR+F+ML NS++NQGSI+HW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL+VKKHP V+ AGR L+F+DL D VMFQ ++DPWF L+MCFV+P VA H WGEDFWN F+VAGALRY +VLHFTW VNSAAH++GDHPYD S+PSENP VS C++GEGWHNWHHKYPFDYAASE+G+S+QFNP+K+ ID+ AA GLV RKR AWA + RRD +
Sbjct: 5 IQMFRDIPKVVSQHWKDGTLNWPMGIYITLVHIVAAVGLFSVQKCSRDTLMFAFILWPISGFGITVGVHRLWSHRSYEAAAPVRLFLMLCNSISNQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVAAGRQLDFSDLSEDAFVMFQKKLDPWFTLYMCFVMPAQVASHFWGEDFWNAFFVAGALRYVIVLHFTWLVNSAAHLYGDHPYDYLSYPSENPIVSFCSVGEGWHNWHHKYPFDYAASEYGISSQFNPSKLFIDILAAVGLVWGRKRGTAAWAHGRARRDRD 308
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S2DXG6_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DXG6_9STRA) HSP 1 Score: 468 bits (1203), Expect = 4.490e-161 Identity = 206/305 (67.54%), Postives = 248/305 (81.31%), Query Frame = 2
Query: 329 LVKDTVETVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNEETA 1243
+ +D V+YH+K +INWPM IYITLVHV AVVG T+ C +T L AF+LWPI+G GIT GVHRLW+HRSY+A + VR+F+ML NS+ANQGSI+HW+RDHRVHHK+SETDADPHNA RGFFFAHMGWLYV+KHP V++AGR L+F+DL D +VMFQ ++DPWF L+MCFV+P VA WGE+FWN F+VAG LRY VVLHFTW VNSAAH++GDHPYD S+P+ENP VS C++GEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID+ AA GLV RKR AWA K RRD + A
Sbjct: 44 MFRDIPSLVSYHYKEGNINWPMGIYITLVHVVAVVGLFTVPKCSAETLLWAFVLWPISGFGITVGVHRLWSHRSYEASFVVRLFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLYVRKHPDVVKAGRELDFSDLYEDSLVMFQKKLDPWFTLYMCFVMPAQVAAAFWGEEFWNAFFVAGCLRYAVVLHFTWLVNSAAHLYGDHPYDVLSYPAENPIVSFCSVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMLAAVGLVWGRKRGTAAWAMGKARRDRDRAA 348
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Match: A0A7S2YQ39_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQ39_9STRA) HSP 1 Score: 467 bits (1201), Expect = 6.810e-161 Identity = 203/307 (66.12%), Postives = 252/307 (82.08%), Query Frame = 2
Query: 323 ITLVKDTVE---TVAYHWKNKSINWPMSIYITLVHVAAVVGFTTIQHCKWQTCLLAFILWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKHSETDADPHNAKRGFFFAHMGWLYVKKHPAVIEAGRTLNFADLEADPVVMFQDRMDPWFALFMCFVLPGLVAKHSWGEDFWNGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDGKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDVFAAFGLVTNRKRAVGAWAKLKERRDNE 1234
I ++ D +E T++YH+KN ++N+PM +YI+LVH+ A+VG T + +C +T L AF+LWPI+G GIT GVHRLW+HRSY+A + VR F+ML NS+ANQGSIYHW+RDHRVHHK SETDADPHNA RGFFFAHMGWL+VKKHP V++AGR ++F+DL DP+V FQ + DPWFAL+MC+V+P VA++ WGEDFW F VAG LRYCVVLHFTW VNSAAH++GDHPYD S+PSENPFVS C++GEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID+ AA GLV RKR AW + RRD +
Sbjct: 34 IKMISDILEIPSTISYHYKNGNLNYPMIVYISLVHIVAMVGLTAVVNCSKETLLWAFLLWPISGFGITVGVHRLWSHRSYEASFPVRFFLMLCNSIANQGSIYHWARDHRVHHKFSETDADPHNAMRGFFFAHMGWLFVKKHPEVVKAGREMDFSDLMDDPLVYFQKKCDPWFALYMCYVMPAQVAQYGWGEDFWTAFLVAGGLRYCVVLHFTWLVNSAAHLYGDHPYDVVSYPSENPFVSFCSVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMLAAVGLVWGRKRGTSAWVMGRARRDRD 340 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig105.430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig105.430.1 >prot_S-latissima_F_contig105.430.1 ID=prot_S-latissima_F_contig105.430.1|Name=mRNA_S-latissima_F_contig105.430.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=341bp MASDSSDTVLEGRALTLNPITLVKDTVETVAYHWKNKSINWPMSIYITLVback to top mRNA from alignment at S-latissima_F_contig105:61555..68067+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig105.430.1 ID=mRNA_S-latissima_F_contig105.430.1|Name=mRNA_S-latissima_F_contig105.430.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=6513bp|location=Sequence derived from alignment at S-latissima_F_contig105:61555..68067+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig105:61555..68067+ >mRNA_S-latissima_F_contig105.430.1 ID=mRNA_S-latissima_F_contig105.430.1|Name=mRNA_S-latissima_F_contig105.430.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=2046bp|location=Sequence derived from alignment at S-latissima_F_contig105:61555..68067+ (Saccharina latissima SLPER63f female)back to top |