mRNA_S-latissima_F_contig1025.229.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI) HSP 1 Score: 824 bits (2128), Expect = 7.930e-298 Identity = 419/522 (80.27%), Postives = 460/522 (88.12%), Query Frame = 1
Query: 49 MITRGARAMALATFACTRCVSFMHGGSRLVRTGAQAGRHLAALHSSTQVEQSTKSHAEGKGRGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEAI 1614
MIT AR MA+ATFA TRC SF++GG+R RTGA + AALHSS QVEQ+TK H E R NADD SLD++LIST P+LVV+H+KARRMGE+S+ AV RIG+LM++RRE IMTKE AL QR + QIGKLMK GQA EAE KK EV+ IN++A SAEE N+VDSE+NTL M+LPNLLDSRVPDGDGE++NVVV EWGQEYI +GEEY+WHDEVA KLGGWDPEGAARI+G+RFSVLKGPLARLERA+GQWLLDVHTTEHGYTEVS+PLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDK+QLP+SLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVK TTPEDSR+EHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGAR CYDLEVWM GQGA+REISSCSNCQDFQARRM LRYREPTPE KKKKSRN+ C+TINGSGVAVGRALVAVLENYY+P+DGSV IPDVLRPYMGG E LE++
Sbjct: 1 MITPCARVMAVATFATTRCGSFLYGGARFARTGA---KQFAALHSSAQVEQTTKDH-ESLSRSNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVHRIGDLMDNRRELIMTKEDALKQRNAM-----------SAQIGKLMKAGQAKEAEEKKNEVQSINKIAGSAEEDLNEVDSELNTLLMRLPNLLDSRVPDGDGEEENVVVAEWGQEYIKNGEEYLWHDEVAIKLGGWDPEGAARISGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSLPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKAQLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREISSCSNCQDFQARRMNLRYREPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPIDGSVSIPDVLRPYMGGAEKLESV 507
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A835YK02_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK02_9STRA) HSP 1 Score: 590 bits (1521), Expect = 3.750e-205 Identity = 308/506 (60.87%), Postives = 375/506 (74.11%), Query Frame = 1
Query: 121 GGSRLVRTGAQAGRHLAALHSSTQVEQSTKSHA----EGKGRGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTP---EGK----KKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENL 1605
G + L R + GR +A S + ++ A E GR +AD VSLD +++ +P++V+ +L+ARR G+E++ V IG LME R I ++AAL RKTL QIGKLMK G+ + A K +V N A +A+ +VD +N +FM+LPNLLD+RV DG E DN +V EWGQEYI G+EY+WHD++AT+LGGWDPEGA+R+AG+RFSVLKG LARLERA+GQW LDVHT EHGY EV+VPLLVTRS LEGTGQLPKFE+DLF+TNH V EDSFLIPT EVPLTNL+RGQ+LD+S LP++ ALTPCFRAEAGS GRDTRGLLRQHQFLKVELV+VT+ S DEHEALT HAE +L+ LKLP+R++ LCSGDIGF AR CYDLEVW+ GQ A+REISSCSNC DFQARRMGLRY+ P EGK K K + C+TINGSGVAVGRALVAVLENY++P DG+V +P+VLRPYMGG+ L
Sbjct: 39 GANLLARQQWRIGRAIATSASRRRDPRANLLRASAATEVHGRLSADGVSLDAQVVAKQPDIVLSNLRARRAGDEAIETVSSIGGLMEQRTGLIRKRDAALNTRKTL-----------SAQIGKLMKEGKEGDVAAIKEQVAMANAEAGAADAELAEVDERVNDMFMRLPNLLDARVVDGSDEKDNELVLEWGQEYIKEGDEYLWHDDIATRLGGWDPEGASRVAGARFSVLKGQLARLERALGQWFLDVHTQEHGYQEVNVPLLVTRSVLEGTGQLPKFEDDLFQTNHKVGGEDSFLIPTAEVPLTNLVRGQMLDESDLPLAFAALTPCFRAEAGSYGRDTRGLLRQHQFLKVELVRVTSAASSADEHEALTGHAEKILQLLKLPYRKMRLCSGDIGFSARMCYDLEVWLPGQKAFREISSCSNCGDFQARRMGLRYKGKDPYAEEGKGGKGKGKQTTLACHTINGSGVAVGRALVAVLENYFNPKDGTVTVPEVLRPYMGGLLKL 533
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S2UWA1_9STRA (Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA1_9STRA) HSP 1 Score: 569 bits (1467), Expect = 1.320e-197 Identity = 295/480 (61.46%), Postives = 365/480 (76.04%), Query Frame = 1
Query: 184 STQVEQSTKSHAEGK-GRGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEY-IHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEAIS 1617
S+++ ST +E K R + +++ D+ ++ + V HL ARR GEE L AVD+IG LME R I TK+ AL+ RK++ +IGKLMK G+ D AE KK+EVE N+ AD+AE N+VD+E+NTLF LPNLLD R DGD + N VV+EWG E + GE+Y+WHD++A +GGWDP+ ++ I+G+RFSVL+GPLARLERAIGQ+ LD HT ++GY EVSVP +VTRS+LEGTGQLPKFEEDLFK NH+ A ED+FLIPT EVPLT+LLRG++LD LPISL LTPCFRAEAGS G+DTRGLLRQHQF KVELVK+ TPE S D HE LT HAEA L+ALKLP+R+V LCSGDIGFGAR CYDLEVW+ GQ +REI+SCSNC DFQARRMGLRYR EGKKKK+ V C+T+NGSG+AVGR LVA+LENYY+P DGSV +P+VL+PYMGG + +E ++
Sbjct: 29 SSKLYSSTSDISEVKIQRIDPQEIAYDSRYVAQNGDSVKAHLLARRAGEEQLEAVDKIGVLMEKRLALIKTKDGALSIRKSV-----------SAEIGKLMKAGEKDAAEEKKKEVEVANQQADAAEAELNEVDAEVNTLFAGLPNLLDPRTVDGDDDTQNEVVSEWGTEGGLKKGEQYLWHDDIALGVGGWDPDASSAISGARFSVLRGPLARLERAIGQFFLDEHTQKNGYEEVSVPYVVTRSTLEGTGQLPKFEEDLFKVNHVAAGEDAFLIPTAEVPLTSLLRGKVLDPKILPISLTGLTPCFRAEAGSYGQDTRGLLRQHQFHKVELVKICTPEQSFDAHEELTAHAEACLQALKLPYRKVRLCSGDIGFGARMCYDLEVWLPGQEMFREIASCSNCADFQARRMGLRYR--VVEGKKKKT--VFCHTMNGSGLAVGRTLVAILENYYNPEDGSVAVPEVLQPYMGGQKKIEKVT 493
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: W7TYV7_9STRA (Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV7_9STRA) HSP 1 Score: 530 bits (1364), Expect = 2.000e-181 Identity = 280/495 (56.57%), Postives = 352/495 (71.11%), Query Frame = 1
Query: 151 QAGRHLAALHSSTQVEQSTKSHAEGKGRGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTP------EGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEAIS 1617
Q GR LH + ++ GR ++ +LD L++ P+LV+ HL+ARR +E +V I +L R+E + ++ AL QRK+L +IGKLM+ Q EA K +VE N VA +AEE ++++ EM++L +Q+PNLLD RVPDGD E +N VV EWG E GE Y+WHD++A KLGG+DP AAR++G+RFS+L GPLARLERAI Q+ LD HT E+GY EVSVP +V+RS+L GTGQLPKFEEDLF NH V ED+FLIPT EVP+TNL R ++L+ +QLP+S V LTPCFRAEAGS GRDT+GLLRQHQF KVELVK+TTPE S EHEALT+ AE L+ L+LP+R+V LCSGDIGF A +CYDLEVW+ Q YREI+SCSNC+DFQARRM LRYR P P GK KKS VLC+TINGSG+AVGR LVA+LENY + DGSV++P+VL PYMGG LE ++
Sbjct: 59 QRGRRDVGLHGAVRM---------ASGRPSSGGKTLDVKLVTEEPDLVLAHLEARRASDEQASSVSDIADLYLRRKELVKEQQGALTQRKSL-----------SAEIGKLMREKQDAEAAKLKTQVEYANSVASTAEEQLHQLEREMDSLMLQMPNLLDDRVPDGDDELNNEVVLEWGVERRKVGERYLWHDDIAAKLGGYDPAAAARLSGARFSILSGPLARLERAIVQFFLDQHTAENGYREVSVPYIVSRSTLTGTGQLPKFEEDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILEATQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSDAEHEALTRDAEECLRLLELPYRKVRLCSGDIGFAAAHCYDLEVWLPAQQTYREIASCSNCRDFQARRMALRYR-PAPLGAAKEAGKGKKS-TVLCHTINGSGLAVGRTLVAILENYQEE-DGSVRLPEVLVPYMGGTTKLEPVA 530
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S3Z8C3_9EUKA (Serine--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8C3_9EUKA) HSP 1 Score: 516 bits (1330), Expect = 6.410e-177 Identity = 272/477 (57.02%), Postives = 335/477 (70.23%), Query Frame = 1
Query: 232 RGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKS---------------RNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEAIS 1617
R +A V D L+ PE+V+EHLKARR E+ L AV I +L E RR+ I ++AAL +RKTL +IGKLMK+G AE K +V N A AE + +V+ E N LF +LPNLLD RVPDGD E++N +VT WG+EYI GE+ WHDE+A LGG+ PE A +++GSRFSVL+GPLARLERA+ ++LD HT EHGY E SVP LV+R LEGTGQLPKFE+DLFKTNH ++ DSFLIPT EVPLT+L R +L +S LPI LV TPCFRAE+ S GRDTRGLLRQHQF KVELV +++ E+S + HE +T+HAE +L+ LKLP+R+V LCSGDIGF AR+CYDLEVWM GQ +REI+S SNC DFQARRMGLRYR + +K + V C+T+NGSGVAVGRALVAVLENY +P DGSV +P+VL PYM GV L ++
Sbjct: 16 RVDAQTVDYDLRLLQDNPEVVLEHLKARRAKEDVLAAVGTISKLNERRRQLIKERDAALNKRKTL-----------SAEIGKLMKSGDQAAAEEIKAQVSAANAQAAEAEATLAEVEGECNALFARLPNLLDQRVPDGDSEENNELVTLWGEEYIKKGEDMKWHDELAATLGGYAPEAAVKVSGSRFSVLRGPLARLERALSAFMLDTHTLEHGYEEHSVPYLVSRQVLEGTGQLPKFEDDLFKTNHDISGMDSFLIPTAEVPLTSLYRDDILQESNLPIKLVGHTPCFRAESDSGGRDTRGLLRQHQFHKVELVCISSKENSNEVHEKMTEHAETILRKLKLPYRKVRLCSGDIGFSARHCYDLEVWMPGQDQFREIASISNCGDFQARRMGLRYRPAEKDDAEKDEXXXXXXXXXXXXXXKKTVHCHTLNGSGVAVGRALVAVLENYQNP-DGSVTVPEVLVPYMNGVTVLNPVT 480
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S3Y0F1_HETAK (Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F1_HETAK) HSP 1 Score: 495 bits (1275), Expect = 1.780e-168 Identity = 265/491 (53.97%), Postives = 324/491 (65.99%), Query Frame = 1
Query: 139 RTGAQAGRHLAALHSSTQVEQSTKSHAEGKGRGNADDVSLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEA 1611
RTG R L ST V R + D + D ++ PE + HL ARR G E L +V RI EL +RRE I ++AAL RK L +IG+ MK G + A AKK EV NLLD+ VP+GD + N +V EW + + GEEY+WHDE+A KLGG+ PE AAR++G+RFSVL GP+ARLERA+ Q+ LD+HT EHGY EV+ P +VTRS+L GTGQLPKFE+DLFK +H A ED+FLIPT EVPLTNL RG++L+ LP++ A TPCFRAEAGS GRDTRGLLRQHQF KVELVK+ T E ++ EHE LT+ AE L+ L LP+R++ LCSGDIGFGAR CYDLEVW+ GQ A+RE++SCSNC DFQ RRM LRYR GKKK N +T+NGSG+AVGRALVAVLENYY+P DGS+ IP+VLRPYMGG+E +EA
Sbjct: 30 RTGLGRFRSSPVLFMSTTV-----------ARFDPDGAAYDARFVAENPEGIRAHLAARRAGAEQLASVGRIEELSGARRELIGRRDAALGVRKAL-----------SAEIGQAMKAGDQELAAAKKAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLDAAVPEGDDDGQNELVREWNTDNLKRGEEYLWHDEIAAKLGGFLPESAARLSGARFSVLAGPVARLERALMQFALDLHTLEHGYLEVATPYIVTRSTLRGTGQLPKFEDDLFKVSHEAAGEDAFLIPTSEVPLTNLHRGEILEGKALPLAFAACTPCFRAEAGSYGRDTRGLLRQHQFNKVELVKICTEEQAKAEHEKLTEDAEKALQLLGLPYRKMRLCSGDIGFGARLCYDLEVWLPGQEAFREVASCSNCADFQGRRMNLRYRTVDENGKKK---NAFAHTMNGSGLAVGRALVAVLENYYNPEDGSLTIPEVLRPYMGGLEKIEA 495
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S3T3K2_9SPIT (Serine--tRNA ligase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T3K2_9SPIT) HSP 1 Score: 485 bits (1248), Expect = 1.440e-164 Identity = 255/453 (56.29%), Postives = 316/453 (69.76%), Query Frame = 1
Query: 256 LDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEY-IHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLEA 1611
LD LI+ +PE+V L+ R+ +E + AV+RIGEL R + AA AQRK L +IG L+K G AE K +V ++ A A+E V+SE ++LF LPNLLD R PDG E+DNV V EWG + + SG WHDE A LGG D + AA+++GSRF+VL+GP+ARLERAI + LDVHT+EHGY EV+VP +V +L GTGQLPKF+EDLFK + V +++LIPT EVP+TNL G +L+++ LPIS V TPCFRAEAGS G+DTRGL RQHQF KVELVK+TTPE S EH AL HAE LK LKLP+R++ LC GDIGF A+ CYDLEVW+ GQG +REISSCSNC FQARRM LRYR PT G KK + V C+TINGSG+AVGR LVA+LENY + DGS+ +P+VLRPYMGG+E + A
Sbjct: 47 LDERLIAEQPEMVRHSLRRRQASDEVIAAVERIGELTRERATLVELGNAARAQRKAL-----------SPKIGALLKAGDTQAAEELKEDVARASKEAAEADEKMEAVESERDSLFATLPNLLDERTPDGVDEEDNVCVDEWGTDRDLPSGR--TWHDEAAAALGGLDMDAAAKLSGSRFAVLRGPIARLERAIANFFLDVHTSEHGYREVNVPFIVGAETLRGTGQLPKFQEDLFKLSEPVNGREAYLIPTAEVPITNLHAGDILEEASLPISYVGYTPCFRAEAGSHGKDTRGLFRQHQFYKVELVKITTPEQSDAEHHALVAHAEECLKRLKLPYRKMMLCGGDIGFSAQLCYDLEVWLPGQGKFREISSCSNCGSFQARRMNLRYR-PTAAGTDKKQKPVHCHTINGSGLAVGRTLVAILENYQNE-DGSITVPEVLRPYMGGLEVIRA 484
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A8J5X803_DIALT (Serine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X803_DIALT) HSP 1 Score: 486 bits (1250), Expect = 1.560e-164 Identity = 260/461 (56.40%), Postives = 323/461 (70.07%), Query Frame = 1
Query: 253 SLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQEYIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYRE----PTPEGKKKKSRNV-----LCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENLE 1608
SLD L+S P++V E L+ RR E L A++ IGEL + + L RK L QIG L+K G EAE K +V + A EE V+ E L LPNLLD RVPDG + DN +V++W E WHDE+AT+LGG D +GAA+I+G+RFSVL+GP+ARLERA+ + LD+HT +HGYTE++VP++V R +LEGTGQLPKFE+DLFK + V D+FLIPT EVPLTNLL G++L ++ LP++ VALTPCFRAEAGS GRDTRGL+RQHQF KVELV++T DS +HEALT+HAEA L+AL+LP+RR+ LCSGDIGF AR+CYDLEVW+ GQGA+REISSCSNC DFQARRM LRYR P +G+KK + LC+TINGSG+AVGRALVAVLENY P DGSV +P+VLRPYMGG+ +E
Sbjct: 56 SLDAKLVSDSPDVVAESLRRRRAPAEQLRALETIGELQRRYAQLSFEVSSQLGVRKQL-----------SPQIGALLKQGNEAEAEVLKEQVAAASAEAKRLEELLAAVELERAALLDALPNLLDPRVPDGADDTDNELVSQWQPAAGVRPETGDWHDEIATRLGGLDVDGAAKISGARFSVLRGPIARLERALANFFLDLHTGQHGYTEMAVPVIVGRGALEGTGQLPKFEDDLFKLSAPVNGRDAFLIPTAEVPLTNLLAGEILPEASLPLAFVALTPCFRAEAGSYGRDTRGLIRQHQFAKVELVRITAAHDSDAQHEALTRHAEACLEALELPYRRMRLCSGDIGFSARHCYDLEVWLPGQGAWREISSCSNCGDFQARRMALRYRPAAAAPDGDGQKKGGKAAAPKPTLCHTINGSGLAVGRALVAVLENYAQP-DGSVIVPEVLRPYMGGLARIE 504
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S0J0D9_9EUKA (Serine--tRNA ligase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0D9_9EUKA) HSP 1 Score: 471 bits (1213), Expect = 4.820e-159 Identity = 251/452 (55.53%), Postives = 313/452 (69.25%), Query Frame = 1
Query: 253 SLDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQE-YIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENL 1605
+LD LI+ PE+V+ L+ RR +E LGAV RIG L + R + A AQRK L +IGKLMK G A A+A K EV +AD A+ ++SE LF LPNLLD R P+G+ E+ NV V WG E + +G + WHDE A+ LGG D E AA+++GSRF+VLKG LARLERA+ + +D HTT+HGYTEV VP LV R +LEGTGQLPKFE+DLF+ + + FLIPT EVPLTNL ++LD++ LPI+ A TPCFRAEAGS G+DTRGL RQHQF KVELV++++PE S EH A+ QHAE L+ LKLP+R++ LCSGDIGF A CYDLEVW+ GQG +REISS SNC FQARRM LRYR PT EG K + C+TINGSG+AVGR LVA+LENY DGS+++P+VLRPYMGG++ +
Sbjct: 61 TLDERLIAEDPEVVLRSLRMRRAADEQLGAVGRIGALTKERAALVEKGNEARAQRKAL-----------SPKIGKLMKEGDAAAADALKAEVSAAAAIADEADAQMEVIESERKALFDTLPNLLDERTPEGNDEEQNVEVGSWGCEGELPTGRQ--WHDEAASALGGLDMEAAAKLSGSRFAVLKGSLARLERALISFFVDTHTTQHGYTEVMVPYLVGREALEGTGQLPKFEDDLFRLAEPLNGREGFLIPTAEVPLTNLHANEILDEATLPIAYCAFTPCFRAEAGSHGKDTRGLFRQHQFHKVELVRISSPEQSDAEHHAVVQHAETCLQLLKLPYRKMKLCSGDIGFSASLCYDLEVWLPGQGRFREISSVSNCGSFQARRMNLRYR-PTQEGAGKPPKPRFCHTINGSGLAVGRTLVAILENYQLD-DGSIEVPEVLRPYMGGLDKI 497
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Match: A0A7S0L7B1_9EUKA (Serine--tRNA ligase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L7B1_9EUKA) HSP 1 Score: 471 bits (1211), Expect = 1.110e-158 Identity = 250/451 (55.43%), Postives = 312/451 (69.18%), Query Frame = 1
Query: 256 LDTLLISTRPELVVEHLKARRMGEESLGAVDRIGELMESRREFIMTKEAALAQRKTLYHAFLCGFPVCGQQIGKLMKTGQADEAEAKKREVEGINEVADSAEESFNKVDSEMNTLFMQLPNLLDSRVPDGDGEDDNVVVTEWGQE-YIHSGEEYIWHDEVATKLGGWDPEGAARIAGSRFSVLKGPLARLERAIGQWLLDVHTTEHGYTEVSVPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKSQLPISLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSRDEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARYCYDLEVWMAGQGAYREISSCSNCQDFQARRMGLRYREPTPEGKKKKSRNVLCNTINGSGVAVGRALVAVLENYYDPVDGSVQIPDVLRPYMGGVENL 1605
LD LI PELV+ L RR +E L AV RIGEL + R + AA AQRK L +IG+LMK G+ A+ K EV +A +A+E +++E LF LPNLLD R PDG E+ N+ V+ WG + + SG E WHD+VA+ LGG D E AA+++GSRF+VLKG LARLERA+ + +D HTT+HGYTEV VP LV R +LEGTGQLPKFEEDLF+ + + FLIPT EVPLTNL G+++D+ LPI+ A TPCFRAEAGS G+DTRGL RQHQF KVELV++ TPE S EH A+ QHAE L+ LKLP+R++ LCSGDIGF A +CYDLEVW+ GQG +REISS SNC FQARRM LRYR P EG K + V C+TINGSG+AVGR LVA+LENY DG++++P+VL+PYMGG++ +
Sbjct: 66 LDERLIVEEPELVLRSLHMRRAADEQLAAVSRIGELTKERAVLVEKGNAARAQRKAL-----------SPKIGRLMKNGETGAADELKAEVATAAAIASAADEQMEAIEAERKGLFDTLPNLLDPRTPDGADEEANIEVSSWGCDGELPSGRE--WHDDVASALGGLDMEAAAKLSGSRFAVLKGSLARLERALISFFVDTHTTKHGYTEVMVPYLVGRDALEGTGQLPKFEEDLFRLDAPLNGRQGFLIPTAEVPLTNLHAGEIIDEPTLPIAYCAFTPCFRAEAGSHGKDTRGLFRQHQFHKVELVRICTPEQSDAEHHAVVQHAETCLQLLKLPYRKMRLCSGDIGFSAMHCYDLEVWLPGQGRFREISSVSNCGSFQARRMSLRYR-PAQEGAGKPPKPVFCHTINGSGLAVGRTLVAILENYQSD-DGTIEVPEVLQPYMGGLKRI 501 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1025.229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig1025.229.1 >prot_S-latissima_F_contig1025.229.1 ID=prot_S-latissima_F_contig1025.229.1|Name=mRNA_S-latissima_F_contig1025.229.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=524bp MITRGARAMALATFACTRCVSFMHGGSRLVRTGAQAGRHLAALHSSTQVEback to top mRNA from alignment at S-latissima_F_contig1025:62862..73390+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig1025.229.1 ID=mRNA_S-latissima_F_contig1025.229.1|Name=mRNA_S-latissima_F_contig1025.229.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=10529bp|location=Sequence derived from alignment at S-latissima_F_contig1025:62862..73390+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig1025:62862..73390+ >mRNA_S-latissima_F_contig1025.229.1 ID=mRNA_S-latissima_F_contig1025.229.1|Name=mRNA_S-latissima_F_contig1025.229.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=3144bp|location=Sequence derived from alignment at S-latissima_F_contig1025:62862..73390+ (Saccharina latissima SLPER63f female)back to top |