mRNA_S-latissima_F_contig1023.207.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1023.207.1
Unique NamemRNA_S-latissima_F_contig1023.207.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 4.870e-170
Identity = 389/604 (64.40%), Postives = 423/604 (70.03%), Query Frame = 1
Query:  715 SLGRELIGEGPLMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIKAGAVDAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATIHAAMNSV--LGLRVSTPESLGSHGGAG-----------YFAGGXXXXXXXXXXXXXRSTGGLSPLESLGXXXXXASVGMH--MLPS----------------HV--PTFR-TTEMSDFRAVAAWQREQQPXXXXXXXXXXXXXXXXXXXXGRGSDSD-----DSEIETVSLGSIGARTPVSSTAGSPRAVASYNTSPTLSGTASTPGGDWSLFSGGFGLGMAALQEGSSC---ASTPTTSRATPRVHFPEGLQALGGNDPVLGSVASTDDVDVDAQGDGEEEGKDVAGGATKEAAGSHAPXXXXXXXXXXXXXXXXR-------------VVDPNVMNSLEGTSSEDGEGEXXXXXXX---------------IADKVARLGRRLQSMGLGKYCSKFAENEVDLESLGLMTEGDLADIGIPKGPRLKILNAVGARGAGAAS 2316
            S GRE++GEG  MGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDL SVEHAAKSVDAYVAAAPIKAGAV+AAVTKT+ECPP LLD LGDRTTIARIVKETHAQVVVNKKI RIIVRGDHRSVDLAY SV+A IH A++    LGLRVSTP+S GS G  G           YF  G   XXXXXXXXXX      SPL S      X   GMH  MLPS                H+  P +R   + ++F  +A WQ+EQ  XXXXXXXXXXXXXXXXXXXX            DSEIETVSLGSIGARTPVSSTAGSPR V SYNTSP LSGTASTP GDWSLFSGGFG+GMAALQEG S    +STPTT+R TPRVHFPEGL+AL G      S AS  D+ V  +G G       A G +         XXXXXXXXXXXX                  V +  V+++LEG +S+  E  XXXXXXX               I+DKVARLG+ LQ+MGLGKYC KFAENEVDLE+LGLM+E DLADIGIPKGPRLKILNAVGAR A A +
Sbjct:   37 SAGREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMR----SPLVS--GAVAXXXXGMHHLMLPSTAGGAGGSSHADPDLHHLAAPDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGG-AGRASAASAGDLAV-LKGSGLLSPASAADGNSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEEXXXXXXXXXXXXXXXXXXXXXXEDISDKVARLGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGARAAAATN 632          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 248 bits (632), Expect = 4.950e-72
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 1
Query:  763 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIKAGAVDAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATIHAA 1212
            YSIKRCQGFVRCDMDIDAEVVGWVIGK+GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSV+AYVAAAPIKAGAV+AAVT++L+CPPHLLDVLGDR TIARIVKET AQVVVNKK+AR+IVRG   +V +A   VQA I AA
Sbjct:   42 YSIKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.200e-68
Identity = 123/170 (72.35%), Postives = 142/170 (83.53%), Query Frame = 1
Query:  763 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIKAGAVDAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATIHAAMNSVLGLRVSTPESLGSHGG 1272
            YSIKRCQGF+RCDMDIDAEVVGWVIG+NGSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK V+AYVAAAPIKAGAV+AAVT++LECPPHLLD+LGDR TIARIVKET AQVVVNKK+AR+I+RG+  +V +A   +Q  I AA        +      GS GG
Sbjct:   57 YSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAAAAEHARRAILHASDYGSSGG 226          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 3.770e-28
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:  769 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIK---AGAVDAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATI 1203
            ++R  GFVRC MDI  EVVGWVIG++G+ IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  D   +  +ECPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++  I
Sbjct:   25 LERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVI 174          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.480e-24
Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 1
Query:  769 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIK---AGAVDAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKI 1134
            +++  GFVRC +DI  EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  D  V++ ++CPPHL+ +L  R  +TI RI +E+ A VV+N+K+
Sbjct:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.520e-18
Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 1
Query:  817 EVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPI---------------------------------KAGAVDAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQ 1194
            EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++  P                                   AG  D  V++ ++CPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV LA A ++
Sbjct:  318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIE 478          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.820e-14
Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 1
Query:  865 MKHKTGCNMWVDQRALKLTITGPDLSSVEHAAKSVDAYVAAAPIK---AGAVDAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATI 1203
            ++H++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  D   +  +ECPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++  I
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVI 176          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ)

HSP 1 Score: 59.3 bits (142), Expect = 2.610e-6
Identity = 25/48 (52.08%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 2146 LQSMGLGKYCSKFAENEVDLESLGLMTEGDLADIGIPKGPRLKILNAV 2289
            L ++GL KY   FAENE+DL+++GL++E D  ++G+P GPR K+L AV
Sbjct:    9 LDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAV 56          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A7S1SBX6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBX6_ALECA)

HSP 1 Score: 60.1 bits (144), Expect = 1.540e-5
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 2116 ADKVARLGRRLQSMGLGKYCSKFAENEVDLESLGLMTEGDLADIGIPKGPRLKILNAVG 2292
            A + A L   LQS+GLGKY  +    EVDL +L L++E DLAD+G+P GPR K+  A+G
Sbjct:  421 ARRSAALDDLLQSLGLGKYVERLRAEEVDLAALRLLSERDLADLGLPLGPRRKLQAAIG 479          
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Match: A0A1X7U136_AMPQE (SAM domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U136_AMPQE)

HSP 1 Score: 60.8 bits (146), Expect = 1.620e-5
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 2146 LQSMGLGKYCSKFAENEVDLESLGLMTEGDLADIGIPKGPRLKILNAVG 2292
            L  +GL KY + F +NE+D  +L LM+E D A++GIPKGPR+K+LNA+G
Sbjct: 2693 LDKLGLSKYHNLFQKNEIDHHALLLMSEKDFAEVGIPKGPRVKLLNAIG 2741          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1023.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FQB1_ECTSI4.870e-17064.40SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA4.950e-7282.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA4.200e-6872.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI3.770e-2847.33SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA9.480e-2448.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA1.520e-1838.51SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JET1_9PHAE2.820e-1441.53SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A382VC15_9ZZZZ2.610e-652.08Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7S1SBX6_ALECA1.540e-550.85Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A1X7U136_AMPQE1.620e-555.10SAM domain-containing protein n=3 Tax=Amphimedon q... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1023contigS-latissima_F_contig1023:21827..28007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionK Homology domain
Ec32 orthologEc-01_006780.1
Exons2
Model size2907
Cds size1872
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1023.207.1prot_S-latissima_F_contig1023.207.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1023 22289..27434 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815384.662943-UTR-S-latissima_F_contig1023:21826..222881622815384.662943-UTR-S-latissima_F_contig1023:21826..22288Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1023 21827..22288 +
1693924851.6300323-UTR-S-latissima_F_contig1023:21826..222881693924851.6300323-UTR-S-latissima_F_contig1023:21826..22288Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1023 21827..22288 +
1622815384.6984284-UTR-S-latissima_F_contig1023:27434..280071622815384.6984284-UTR-S-latissima_F_contig1023:27434..28007Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1023 27435..28007 +
1693924851.6637099-UTR-S-latissima_F_contig1023:27434..280071693924851.6637099-UTR-S-latissima_F_contig1023:27434..28007Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1023 27435..28007 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815384.676324-CDS-S-latissima_F_contig1023:22288..226731622815384.676324-CDS-S-latissima_F_contig1023:22288..22673Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1023 22289..22673 +
1693924851.6403525-CDS-S-latissima_F_contig1023:22288..226731693924851.6403525-CDS-S-latissima_F_contig1023:22288..22673Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1023 22289..22673 +
1622815384.68818-CDS-S-latissima_F_contig1023:25947..274341622815384.68818-CDS-S-latissima_F_contig1023:25947..27434Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1023 25948..27434 +
1693924851.649042-CDS-S-latissima_F_contig1023:25947..274341693924851.649042-CDS-S-latissima_F_contig1023:25947..27434Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1023 25948..27434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1023.207.1

>prot_S-latissima_F_contig1023.207.1 ID=prot_S-latissima_F_contig1023.207.1|Name=mRNA_S-latissima_F_contig1023.207.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=624bp
MAPIIHMDSQQASHHASWAAADSRQTRPGGQYAHQHQPQQQQQQQWPSGG
QMHPNPMTVSRDFVDDGGFVAPVHGMGPGRVLQGSLGRELIGEGPLMGRG
YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRAL
KLTITGPDLSSVEHAAKSVDAYVAAAPIKAGAVDAAVTKTLECPPHLLDV
LGDRTTIARIVKETHAQVVVNKKIARIIVRGDHRSVDLAYASVQATIHAA
MNSVLGLRVSTPESLGSHGGAGYFAGGAGGGGGGGASGGGRSTGGLSPLE
SLGGGGGGASVGMHMLPSHVPTFRTTEMSDFRAVAAWQREQQPREQQPDL
QHQLQRHHPQQHHGRGSDSDDSEIETVSLGSIGARTPVSSTAGSPRAVAS
YNTSPTLSGTASTPGGDWSLFSGGFGLGMAALQEGSSCASTPTTSRATPR
VHFPEGLQALGGNDPVLGSVASTDDVDVDAQGDGEEEGKDVAGGATKEAA
GSHAPPPSPASTTSGEASRRRRVVDPNVMNSLEGTSSEDGEGEGEDDGED
IADKVARLGRRLQSMGLGKYCSKFAENEVDLESLGLMTEGDLADIGIPKG
PRLKILNAVGARGAGAASSSSSA*
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mRNA from alignment at S-latissima_F_contig1023:21827..28007+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1023.207.1 ID=mRNA_S-latissima_F_contig1023.207.1|Name=mRNA_S-latissima_F_contig1023.207.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=6181bp|location=Sequence derived from alignment at S-latissima_F_contig1023:21827..28007+ (Saccharina latissima SLPER63f female)
AGCAAAGCCCCGCACGCACACTCTCCGTTCGTACGCGCCCGCCTAAGTTA CACTTGGCACTTTGACAAAGAGGCAGCACAATTTTTCAGCTGCCCCTAAG GACACAAACAAAACAGTTCCACGTCCCGGCGCCCTTACGAGCCTCCAGTC TACCACCTGGCACGGCAACGCACGAGTGCAGAGCGTTCGCGTCGCGAAAT CGAGACATTTGCGAATATTCCGCACTTTGTTGCCTCGCCTCGTACTGAGG CATACACAGACAGAGAGTCAAGAGAGTCAGACAGGCACCAGGCTCGAGGC TACCTCCAGTCGATATATATAGGAAACCTGCCAGGCAAGGCAGCTGCTGC AGACGAGAACCACCGCGGCAGCATCAAAGGCAAAGCGAAGCTGGCGCGCT TTCTCGGTGTGCACGAGCAGCAGCAGACGCAGGAGCAGCTGGACCAGGAG AACCAGCACGGGATGGCCCCAATTATCCACATGGACTCCCAACAGGCCAG CCACCACGCGTCCTGGGCGGCCGCAGACAGCAGGCAGACACGCCCGGGCG GGCAGTACGCCCATCAACACCAACCTCAGCAGCAGCAGCAGCAGCAGTGG CCTTCAGGAGGCCAGATGCACCCTAACCCGATGACGGTTTCCCGCGACTT CGTTGACGATGGGGGATTCGTCGCTCCAGTGCACGGAATGGGGCCTGGGC GCGTCCTGCAGGGCTCCCTCGGGCGAGAGCTTATCGGCGAGGGACCGTTG ATGGGGCGGGGCTACAGCATTAAGCGTTGCCAGGGTTTCGTGAGGTGCGA CATGGACATCGACGCTGAGGTGGTCGGGTGGGTCATCGGAAAGAATGGTG AGTTTTCGTTAGTTGCACGTCAATAGCTGTACGAGTCCCTATATTTTTCC GTGCATCACGGACAGAAAAAATGATGACAGCTTTGTGTGAGCTTTTGCTG CTATATGTACGATGCTTTTGCTTTTGTCGTGCCGGGTGCCGAGTCAGACT TTTTTCGGTGTTGCAGCTGTGGTGAACAACAGCAGCAAAGCAGTGCAAGT AGCAGTCATGATTAACAGCTTCAGCAGCAGAGACGCGATGAGCAACTGCT TGCTTCCGAAAAATAAACGTTTTCACGGCATGTCCCTAGGGGTGACGTAG CAGAAGGCTTCGGTGCAGCCGCAGCGCTGCTGCGCCCACAAACCAGGCTC TGGCGGCGGGCTGGCGGGTGTTTGCTTTCGAAGCAATTTCCCGCCGCACA GCCCAAAGCCAGCACGCCAGCACACACCGATCTCTATTTTTTTCTTTTTT TCGTATCAGATTATCACGGGTGGTAGAGCGTCCAGTATTTTAAGCCCCGA ACCAAGCGAACGGGAAATCTGACGACTTTTGATTTGACTTTCTGATCTGT AGAACGCAGAACACTTTACCGTGATGAAACTTTTGGTGTCGGGGCGTTCG TCCGGGCAATTGCACTGCTTGCTGCTTGCTTGCGCCCTTCGCAGCCCACC TACCACGTGCCTCTCTCCTCTGCTATGCGTTATCCATCTATCTAAATATC TAGAAGGTGCACTTGCTGCTTGTTCTTTCTGCGTGCTCTGCGCAAAAAGG CTCCCATTTTTTCTTCAATGAATGAATGCATCGATCGTTTCCACCGATAT TTTTTCCACTTCAACTTTGTGGTCTAGAAGTTCTCTACCCCTTTTTCAAG CGTTTTTTTTCTTGTTTTTCTTTCTTTTTTCTGGAACGGAGATATGTACG TGGTACACGTACAGCAGTAGATGCTTTAGATGCCTCTCTCCCATCAAACG ATGATATATATATTTTTGAACACTTGAAAGTGTACCCCCAGCTCGTGCCC GGTTTCTTGCCTCAAGGCACCCCCACGCAGTCTGGAGCCGTCAAGCCTCC GCATTATATTTTCTCGTGCGATGCACCCACTGCTCACACTATTCTCAGTA GTTGTCGTATAAGAAGTTGCTCTTTCAAACTTTCATTTTTATCGATACTC TTATTCAATACATAGACTAATCATAGACCAGTCGTAGCTATCTCTGCAGC AGCAGTAACAGCTGATGAAGATTATATATATTACAGGGTGTGGCTACAAA CGAAGCTAGCTCTATATATCGGAGGAACTGACTTCGGAGTCACTGGTGCT GCCTCTGCTTCTATATATTTATACTCGTACATTTACCCATTAATTTGCGT TTTATTTTGTTTTTGTTTTTTTTTTCTCTGTTTCACAGTCTGTGACCACA GAATTTGTATCTCTCTAGGATTGGGAATCAGGACAGGCACTGGGTGTACT GACGTGGTTGAGTAGAAAGAACGGGTTTGATGTGAAGACAACAACAACAA CAACATATTATATCACAAGGAAGAAAAGAAAGAAGAAAAAGGGCAGATAC AGCAGTACATCATAAGTTAGTAATAGTAACAATCGGGTTGTCTGTCGGAG GTTGTTTGCGGTTTGCGCTCTTTCGGCCGTGTGCGCCCCACAGACAGGCA GCGTGTGAGAACTATATGATACAAATAGAGTGAGAAACGGAACGAGCCGT TAGGGGTTCGCTGGTTCTCCGCGGGGGATTCGTCAGGTTGCCTGGCCTGG TACCTGGTAGTTGAATACGTACACTTCTAATATTATATGTACATGACGAC CTTGCCAACGTGCCACTTCCGCGTAGTCCATGGATTTCTCCCATTCGTAA TATTTTTACAGCAGTGCTGCTCGTACATGTCAATACGTGCGACCAAGACC ACGAGGAACCTTAAAACTTTTCTCTTGCGCTGCCACGCGTTGTTTGGTAG CTGGTGGCTGAACTGCGCAGAAAGTACGGATCTGTGATTATTACGATAAA TTTCTTGTTTCTGCTTGGCCGTCAGGTTTCTCCACCGCATCCCACTCCTC TCCGGCCTATGACCACATTATGTATTATATACCACAGATAATTAGCTTCC CCCCCCCCCCCTCCGCCGTCTATGTATTAGACTATACATATTTATATATA TATATAAATAGTTTTTTTTCAACATGTGTTCGTGTGTACTTTAATCCGGA CTAACCGTGTTAAAATATGAGGCGTTCACTTTTTTTAACGCCTTGTACGA CGACTGCTGCTGTAGGCACGTAGGCACCAGGTACATCATATTGTGTCTAA CGTAATACTGCTGTTGTAGTTTTAATTATCATATTATACGAGCATGTCAT TTTTTAGCTGGTACCAGGTATTATATTACATATTGTATATATATATGTGT TTTTATCTCCCCGAAAAGAGCGAGTTCGCGAGTTCACTTCCTTGTTTCGG TTTGCACGGCCTTCTTGACTACGGATGGTACTTAACCAGATACCACAGGT ACAATATGAAGTACTGAAATTGCTGTTCTATTAAACCTGCTCTGCACGTC CGTGCTGTTCTTAATTTTGTTTAATGATTAACCGGTGCATGTTTTTACGT ATGACACAGCAGCATCACAAGTACTGGTACATATAATACATATCATATAT ACCTGCAGTATTTAGTGCCCTTCATCGCACGCACGAAAAAAAAAACGCCT GGTTTTGTCCATACACGTGGCACAGTAGAGTAATTATATCAATGTACGTA CGATACTTCCTATATATGTACAAAGCAACACTTTCCGATCCCGACGGCGG CGACGGCGAAAGTGAACTTTTGTGCTGCTTTTTTCCTTTCGTCCCAACGC TCCTTTTCCTTTTTTCTCGTAGCGTACTCGTAGCGTCTTGGCAACGGTTG ATGTCGATTCAACCGACAACTTGAACAAACAAGAGCGAACTCATCCACCA AACGAACCAAAAAAATGAATCTGTACGAACATACCTCGAATTATTAATAC GAGCAGTTTAAGTCTATAGGGGTATCGTATCGTACCGTACGTACGAACGA GTGTATAATGTGTGCACGCACGCCTTTTGTCCCATGCTGGCGTACGATAT ATACGGCGCCGATGTGTGGTCCGTCAAATCAGACGAATGAACCGTTCCTG CCGTCTGTCCTCATATATATACAAGTATGCCTCTTTGAACTCCTGCTGAC ATAGATGCAACCCTCCCCTTTCTTTTTCCCTTATTTTTCTCCCGCGTCGA ATCGGTTCCAAACGAAACCAGGTAGCACAATAAAAGACATGAAGCACAAG ACGGGTTGCAACATGTGGGTGGACCAGCGCGCGCTCAAGCTGACGATCAC CGGCCCCGACCTGTCGTCCGTCGAGCACGCCGCGAAGTCCGTGGACGCGT ACGTCGCTGCCGCGCCCATCAAGGCGGGAGCCGTGGACGCGGCCGTAACG AAGACGCTGGAGTGCCCCCCCCACCTCCTCGACGTGCTCGGCGACCGCAC CACGATCGCTCGCATCGTCAAGGAGACCCACGCACAGGTGGTGGTGAACA AGAAAATCGCCCGCATTATCGTGCGCGGCGACCACCGCTCCGTCGACCTC GCCTACGCGAGCGTCCAGGCCACCATCCACGCCGCGATGAACAGTGTCCT CGGGCTTAGGGTTAGCACGCCCGAGAGCCTCGGTTCGCACGGAGGCGCCG GTTACTTCGCGGGGGGTGCCGGAGGAGGAGGCGGTGGGGGCGCTAGTGGA GGGGGGCGATCTACGGGCGGGTTGTCCCCGCTTGAGAGCTTGGGCGGCGG CGGCGGCGGTGCGTCTGTAGGGATGCACATGTTGCCGTCTCACGTCCCCA CCTTCCGTACGACCGAGATGTCGGACTTCCGCGCAGTGGCCGCCTGGCAG CGGGAGCAGCAGCCGAGGGAGCAGCAGCCGGATCTGCAGCACCAGCTGCA GCGCCACCACCCCCAGCAGCACCACGGGCGGGGCTCGGACTCGGACGACT CGGAGATCGAGACGGTGTCCCTGGGGTCGATCGGCGCTCGGACGCCGGTT AGCTCGACCGCGGGTTCGCCGCGCGCGGTCGCTTCGTACAACACCAGCCC CACGCTGTCCGGGACGGCGTCGACTCCCGGCGGGGACTGGTCTCTCTTCT CGGGAGGCTTCGGCCTGGGAATGGCGGCCTTGCAGGAGGGGTCTTCCTGC GCCAGCACCCCGACCACCTCGAGGGCGACCCCGCGAGTGCACTTCCCCGA AGGCCTCCAGGCTTTGGGAGGCAACGACCCCGTGCTGGGTTCCGTGGCGT CGACTGATGACGTGGACGTGGACGCGCAAGGTGACGGCGAGGAGGAGGGG AAGGACGTCGCGGGGGGCGCCACTAAGGAGGCGGCGGGCTCGCATGCGCC CCCTCCGTCGCCCGCGTCGACGACGAGCGGCGAGGCGTCCCGAAGGAGGC GAGTGGTCGACCCCAACGTGATGAACTCCCTGGAGGGAACTAGCAGCGAG GACGGCGAGGGGGAGGGGGAGGATGACGGGGAGGACATCGCCGATAAGGT GGCGCGCCTCGGGAGGAGACTGCAGTCGATGGGGCTCGGCAAGTACTGCT CGAAGTTTGCGGAGAACGAGGTGGACTTGGAATCTCTCGGGCTTATGACC GAGGGGGACCTCGCCGACATTGGCATCCCAAAGGGTCCTAGGCTGAAGAT TCTTAACGCTGTTGGCGCTCGCGGGGCGGGGGCGGCGAGCAGCAGCTCCT CCGCGTAAAAAAAAAAGGGAGGGGAGGGGTGGGGGGCTCGGTAGTATCAT ACATACCTGCGTTATAATATGATAGCGTGAGGCGGTCAGTCTAAAATGGT TTTCCCCCCTCCCCCCCCCCCCCCCGGCGGTTCACAACACCAAAAACTAA AAGTTATACGCGGCTGCTACTCGAGCGATTTTCAAGAAAAAAAAATAGAG ATGATGTGAACGTTTCTTTTCGTTTTTTTCCTTTTTCCTTTATTTTTCTG CCCCCAACACAAAGGCCGGCCGGAGGCGAGAGAAAAACGAGAGTTGAACG AACGAATTTGTAGTAGCAGTGTGGTGTTGGGTCGAAACTGACATGTCACC GCCCATTGTACTTGTACGGCATATACCTGGGAGAGGGGAGATAAACGATA TGGAGGGATTTTGGTGAGGTGGGGGTGGGGGAAAATAGGATGATGGCCGG GGACGCCTTTGACGTGCCCGTTCTGGCGTAGAGCCCGAACGCCTACGTGT TCGAAATTCATCCCAAGAACTATATTTTTCTTGTTTTTTAGCGGGGGCGG GGGGGGCATTTTTTCTCGTTTTGGTGCGGCC
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Coding sequence (CDS) from alignment at S-latissima_F_contig1023:21827..28007+

>mRNA_S-latissima_F_contig1023.207.1 ID=mRNA_S-latissima_F_contig1023.207.1|Name=mRNA_S-latissima_F_contig1023.207.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=3744bp|location=Sequence derived from alignment at S-latissima_F_contig1023:21827..28007+ (Saccharina latissima SLPER63f female)
ATGGCCCCAATTATCCACATGGACTCCCAACAGGCCAGCCACCACGCGTC
CTGGGCGGCCGCAGACAGCAGGCAGACACGCCCGGGCGGGCAGTACGCCC
ATCAACACCAACCTCAGCAGCAGCAGCAGCAGCAGTGGCCTTCAGGAGGC
CAGATGCACCCTAACCCGATGACGGTTTCCCGCGACTTCGTTGACGATGG
GGGATTCGTCGCTCCAGTGCACGGAATGGGGCCTGGGCGCGTCCTGCAGG
GCTCCCTCGGGCGAGAGCTTATCGGCGAGGGACCGTTGATGGGGCGGGGC
TACAGCATTAAGCGTTGCCAGGGTTTCGTGAGGTGCGACATGGACATCGA
CGCTGAGGTGGTCGGGTGGGTCATCGGAAAGAATGATGGCCCCAATTATC
CACATGGACTCCCAACAGGCCAGCCACCACGCGTCCTGGGCGGCCGCAGA
CAGCAGGCAGACACGCCCGGGCGGGCAGTACGCCCATCAACACCAACCTC
AGCAGCAGCAGCAGCAGCAGTGGCCTTCAGGAGGCCAGATGCACCCTAAC
CCGATGACGGTTTCCCGCGACTTCGTTGACGATGGGGGATTCGTCGCTCC
AGTGCACGGAATGGGGCCTGGGCGCGTCCTGCAGGGCTCCCTCGGGCGAG
AGCTTATCGGCGAGGGACCGTTGATGGGGCGGGGCTACAGCATTAAGCGT
TGCCAGGGTTTCGTGAGGTGCGACATGGACATCGACGCTGAGGTGGTCGG
GTGGGTCATCGGAAAGAATGGTAGCACAATAAAAGACATGAAGCACAAGA
CGGGTTGCAACATGTGGGTGGACCAGCGCGCGCTCAAGCTGACGATCACC
GGCCCCGACCTGTCGTCCGTCGAGCACGCCGCGAAGTCCGTGGACGCGTA
CGTCGCTGCCGCGCCCATCAAGGCGGGAGCCGTGGACGCGGCCGTAACGA
AGACGCTGGAGTGCCCCCCCCACCTCCTCGACGTGCTCGGCGACCGCACC
ACGATCGCTCGCATCGTCAAGGAGACCCACGCACAGGTGGTGGTGAACAA
GAAAATCGCCCGCATTATCGTGCGCGGCGACCACCGCTCCGTCGACCTCG
CCTACGCGAGCGTCCAGGCCACCATCCACGCCGCGATGAACAGTGTCCTC
GGGCTTAGGGTTAGCACGCCCGAGAGCCTCGGTTCGCACGGAGGCGCCGG
TTACTTCGCGGGGGGTGCCGGAGGAGGAGGCGGTGGGGGCGCTAGTGGAG
GGGGGCGATCTACGGGCGGGTTGTCCCCGCTTGAGAGCTTGGGCGGCGGC
GGCGGCGGTGCGTCTGTAGGGATGCACATGTTGCCGTCTCACGTCCCCAC
CTTCCGTACGACCGAGATGTCGGACTTCCGCGCAGTGGCCGCCTGGCAGC
GGGAGCAGCAGCCGAGGGAGCAGCAGCCGGATCTGCAGCACCAGCTGCAG
CGCCACCACCCCCAGCAGCACCACGGGCGGGGCTCGGACTCGGACGACTC
GGAGATCGAGACGGTGTCCCTGGGGTCGATCGGCGCTCGGACGCCGGTTA
GCTCGACCGCGGGTTCGCCGCGCGCGGTCGCTTCGTACAACACCAGCCCC
ACGCTGTCCGGGACGGCGTCGACTCCCGGCGGGGACTGGTCTCTCTTCTC
GGGAGGCTTCGGCCTGGGAATGGCGGCCTTGCAGGAGGGGTCTTCCTGCG
CCAGCACCCCGACCACCTCGAGGGCGACCCCGCGAGTGCACTTCCCCGAA
GGCCTCCAGGCTTTGGGAGGCAACGACCCCGTGCTGGGTTCCGTGGCGTC
GACTGATGACGTGGACGTGGACGCGCAAGGTGACGGCGAGGAGGAGGGGA
AGGACGTCGCGGGGGGCGCCACTAAGGAGGCGGCGGGCTCGCATGCGCCC
CCTCCGTCGCCCGCGTCGACGACGAGCGGCGAGGCGTCCCGAAGGAGGCG
AGTGGTCGACCCCAACGTGATGAACTCCCTGGAGGGAACTAGCAGCGAGG
ACGGCGAGGGGGAGGGGGAGGATGACGGGGAGGACATCGCCGATAAGGTG
GCGCGCCTCGGGAGGAGACTGCAGTCGATGGGGCTCGGCAAGTACTGCTC
GAAGTTTGCGGAGAACGAGGTGGACTTGGAATCTCTCGGGCTTATGACCG
AGGGGGACCTCGCCGACATTGGCATCCCAAAGGGTCCTAGGCTGAAGATT
CTTAACGCTGTTGGCGCTCGCGGGGCGGGGGCGGCGAGCAGCAGCTCCTC
CGCGTAAGTAGCACAATAAAAGACATGAAGCACAAGACGGGTTGCAACAT
GTGGGTGGACCAGCGCGCGCTCAAGCTGACGATCACCGGCCCCGACCTGT
CGTCCGTCGAGCACGCCGCGAAGTCCGTGGACGCGTACGTCGCTGCCGCG
CCCATCAAGGCGGGAGCCGTGGACGCGGCCGTAACGAAGACGCTGGAGTG
CCCCCCCCACCTCCTCGACGTGCTCGGCGACCGCACCACGATCGCTCGCA
TCGTCAAGGAGACCCACGCACAGGTGGTGGTGAACAAGAAAATCGCCCGC
ATTATCGTGCGCGGCGACCACCGCTCCGTCGACCTCGCCTACGCGAGCGT
CCAGGCCACCATCCACGCCGCGATGAACAGTGTCCTCGGGCTTAGGGTTA
GCACGCCCGAGAGCCTCGGTTCGCACGGAGGCGCCGGTTACTTCGCGGGG
GGTGCCGGAGGAGGAGGCGGTGGGGGCGCTAGTGGAGGGGGGCGATCTAC
GGGCGGGTTGTCCCCGCTTGAGAGCTTGGGCGGCGGCGGCGGCGGTGCGT
CTGTAGGGATGCACATGTTGCCGTCTCACGTCCCCACCTTCCGTACGACC
GAGATGTCGGACTTCCGCGCAGTGGCCGCCTGGCAGCGGGAGCAGCAGCC
GAGGGAGCAGCAGCCGGATCTGCAGCACCAGCTGCAGCGCCACCACCCCC
AGCAGCACCACGGGCGGGGCTCGGACTCGGACGACTCGGAGATCGAGACG
GTGTCCCTGGGGTCGATCGGCGCTCGGACGCCGGTTAGCTCGACCGCGGG
TTCGCCGCGCGCGGTCGCTTCGTACAACACCAGCCCCACGCTGTCCGGGA
CGGCGTCGACTCCCGGCGGGGACTGGTCTCTCTTCTCGGGAGGCTTCGGC
CTGGGAATGGCGGCCTTGCAGGAGGGGTCTTCCTGCGCCAGCACCCCGAC
CACCTCGAGGGCGACCCCGCGAGTGCACTTCCCCGAAGGCCTCCAGGCTT
TGGGAGGCAACGACCCCGTGCTGGGTTCCGTGGCGTCGACTGATGACGTG
GACGTGGACGCGCAAGGTGACGGCGAGGAGGAGGGGAAGGACGTCGCGGG
GGGCGCCACTAAGGAGGCGGCGGGCTCGCATGCGCCCCCTCCGTCGCCCG
CGTCGACGACGAGCGGCGAGGCGTCCCGAAGGAGGCGAGTGGTCGACCCC
AACGTGATGAACTCCCTGGAGGGAACTAGCAGCGAGGACGGCGAGGGGGA
GGGGGAGGATGACGGGGAGGACATCGCCGATAAGGTGGCGCGCCTCGGGA
GGAGACTGCAGTCGATGGGGCTCGGCAAGTACTGCTCGAAGTTTGCGGAG
AACGAGGTGGACTTGGAATCTCTCGGGCTTATGACCGAGGGGGACCTCGC
CGACATTGGCATCCCAAAGGGTCCTAGGCTGAAGATTCTTAACGCTGTTG
GCGCTCGCGGGGCGGGGGCGGCGAGCAGCAGCTCCTCCGCGTAA
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