mRNA_S-latissima_F_contig1020.194.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: D7FN09_ECTSI (EstExt_Genewise1.C_60040 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN09_ECTSI) HSP 1 Score: 924 bits (2387), Expect = 1.590e-315 Identity = 631/1176 (53.66%), Postives = 717/1176 (60.97%), Query Frame = 1
Query: 367 MSARCQVHPALMKDLGASPGDPVLVFALAEGWLSGGKPPPPRSLAPAESGGDGAGVTAASAASNPRHAGQGPSGDN------AELRCLLCTVWTNPHLAPTQAAVDGRVNVPLTDSDYPPGPIRLSSGGTTAGVPEGRFGDLTGENTGSTREE------------AVNSSAEDSIASYFLRAAVSRHSVTLAASLAAWGERAKR---GSAVVGIIPLHSAYGELAVTAAAAAARGGRTIGLCGAPPLASRVSARVLPPATRALRKDTGF----GGTPALDASARTGALPP-GPAAGPRGGSLGTGTWRAPPFRPLPLPPEYTSLVKRSLRHLVVSCGCEVAVPACPDSG--VDEGAGVSGRSDANGGRGRG----GGERRRPADGTALLRIGPFSTVGGGGGXXXXXXXXVRRTGALAALLRGEVCAVGPDSLVLVEAEGDTGA----PDAVGLPGLRGVWTPGVGSGVGDSGAGXXXXXXXXXXXEPKHVGKREERRDARKVS-MSPTDALVELMLLPMTAAKPAREGS----TPLEFLVPRGVLLTGPPGVGKTFAVRSAVETVRELSSE-------RGET--LFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAE-DSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPPGGGAGRAEEGEPAVGADVLAAAMEKVGASSLRGHHVTVPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIREAGFGGE----------------------------------GPSGASGPGSLGGFKQ---ATVTMRNLLAAATVSAARPGVTKEMIKGYDRFASGL 3630
MSARCQVHPA+M+DLG PGDPVL L G S G + G TA+ P P+ DN ELRCLLCT+W NPHLA + AVDGR+++P+ V+ A++ IA FLRAA A G A++ G VVGI+P+ S T R GR G +PP A RVSARVL + R GF GGT A+ TG A+ + LPPEYTSL+KRSLRHLVV+ CEVAVP+CP S + EG +G ++ G G G GG+ PADGT LRIG GGG G GAL +LL G VC VGP+SLVLVE+E G D P +GV S G G EP+ + R RKVS M+PT+AL+ELMLLPMTA PA+ PLE LVPRGVLLTGPPGVGKTFAVRSAVE VR + RGE FQV + LNGAEILSLGQWEAC+ALR+AFSAAE WS+ GR RG RCAVIFLDEADALLARRDRDGDKAGGG+GARALAQLLTLMDGF AE SHV+V GATN RPG LDPALRRPGRFDRELAL PPD++ RADILRHHL VKV GGE I V+ KCVGYVGADLAALAR+A LLAAR Q ++P P A + EP + L+ AMEKVGASSLRGH VTVPDTPWSDIGGMEEAKA+LRQAVEWPV +K +FDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEA +RQAF +ARNAAPA+LFFDEIDAIVC R GG KGS++SAESRVLATFLTEMDGVGSL+GD V+VVGATNRPEAVDRALLRPGRFDQVVYAPLP E+ARRQIFEVHTRRM +DRE+VDF +LA V++GLTGAEIEG+CREAAMS+IREAGFGG+ GP ++G K+ A V MR+L+AAA +AARPGVT+EM++GY+RFASGL
Sbjct: 1 MSARCQVHPAVMQDLGLYPGDPVLALTLV-GGRSXXXXXXXXXXXXXXXGSESVGGTASGVFKGPA-----PTADNFAPGGTLELRCLLCTIWANPHLALAETAVDGRIHIPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTVDPPAQNLIAR-FLRAAN------------ASGREAEKDGEGYQVVGIVPVRSLRNGPG-TGTPVGRRAGR--GGDASPPAAGRVSARVLRSSRRHRGSAVGFLGGMGGTAVAAAAGVTGXXXXESDASXLXXXXXXXXXXXXQRQQQRYLPPEYTSLLKRSLRHLVVTDSCEVAVPSCPRSTGTILEGPTAAGVGESANGDGGGSXXXGGKEHLPADGTTFLRIG-VGDKGGGDGRRGEG-------GALTSLLGGAVCVVGPESLVLVESEESRGVGARDSDVEAGPRHKGVRVLDGASAGGRGSPGNDRQRREEVSREPRP--RDGGNRGVRKVSTMTPTEALMELMLLPMTATTPAKAAGGAELKPLESLVPRGVLLTGPPGVGKTFAVRSAVEAVRNAAPRPSFSGTGRGEMDGPFQV-RLTTLNGAEILSLGQWEACQALRDAFSAAEEWSKGEGGGRARG------NRCAVIFLDEADALLARRDRDGDKAGGGEGARALAQLLTLMDGFRGAEGSSHVIVVGATN-RPGALDPALRRPGRFDRELALAPPDVKERADILRHHLMRVKVAGGESTIETVSRKCVGYVGADLAALAREAALLAARTQA---SRPSRHDGEENRPLAAASKEALVEP----EHLSLAMEKVGASSLRGHQVTVPDTPWSDIGGMEEAKARLRQAVEWPVVHKASFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAEIRQAFRIARNAAPAILFFDEIDAIVCNRGGGG-------------KGSASSAESRVLATFLTEMDGVGSLKGDGVVVVGATNRPEAVDRALLRPGRFDQVVYAPLPEENARRQIFEVHTRRMAVDREDVDFLRLAGVTKGLTGAEIEGVCREAAMSAIREAGFGGDADSSTDASSIAAINTXXXXXXXXXXXXXXXXXXVGPEEVQQATTMGRGKERRSAAVAMRHLMAAAEAAAARPGVTQEMMQGYNRFASGL 1116
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A1V9ZVW7_9STRA (AAA family ATPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVW7_9STRA) HSP 1 Score: 389 bits (998), Expect = 5.410e-115 Identity = 250/561 (44.56%), Postives = 329/561 (58.65%), Query Frame = 1
Query: 1864 VPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKV---VGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQ-----------------------PGSTSEAFCPPGGGAGRAEEGEPAVGADVLAAAMEKVGASSLRGHHVTVPDTP----WSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+P+GVLL+GPPGVGKT VR+A ++E S + + L +V +NGAEI+S G EA LRE F R F +FLDE DAL +RD +R +AQLLTL+DG ++ VLVFGATN P +D ALRRPGRFDRE+AL PPD++AR DI HL V + + V N +A KC+GYVGAD+A+L RQA +LA ++ L Q P S S + + V AAAME ASSLRG D+ W+DIGG+E+ K L+QAVEWP+ E F+R+ L PPRGILL+GPPGCSK+T+VRA A A+ ATF+ LS ADVFSPY+G+AEAA+RQ F AR A PA++F DEIDAIV KRE +G SG S ++LR VL+T L EMDGV D +++VGATNRP+ +D ALLRPGRFD+V+Y PLP + R I ++HT+ + + V+ +A+ + +GAE+E +CREA++ ++RE
Sbjct: 238 LPKGVLLSGPPGVGKTLLVRTATRNLQE--SGKCKMLLRV-----INGAEIISHGVGEAEATLREIFHQG------------RAFVAKAVSNVFCLFLDELDALCPQRDTSARAH-----SRVVAQLLTLLDGMDNQSNTRVLVFGATNL-PNAIDSALRRPGRFDREIALRPPDVEARRDIFLVHLNKVPLPPNILKNDVANLLATKCIGYVGADIASLCRQACVLAVQRHQQSLEQVPRILRFLRNQKYSAMYWGYSQWPSSISAEY-----------DDNAYVTPQDFAAAMELTPASSLRGAKTFSKDSSATVTWADIGGLEDVKTSLQQAVEWPLKFPETFERLSLKPPRGILLYGPPGCSKSTIVRACAFASNATFLTLSAADVFSPYVGDAEAAIRQVFRDARAATPAIIFMDEIDAIVSKREFAQG-GSGGSGMALR-----------VLSTLLNEMDGVEV--ADGLLIVGATNRPDMIDAALLRPGRFDRVIYVPLPTTEDRHHILKIHTKHAHLAND-VNLSLIAEQTPYFSGAELENVCREASLLALRE 747
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A1V9ZTI2_9STRA (AAA family ATPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTI2_9STRA) HSP 1 Score: 382 bits (981), Expect = 1.550e-112 Identity = 257/551 (46.64%), Postives = 325/551 (58.98%), Query Frame = 1
Query: 1864 VPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFH-KAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKV---VGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGST-----SEAFCPPGGGAGRAEEGEPAVGADVL-------AAAMEKVGASSLRGHHVTVPDTP----WSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+P+GVLL+GPPGVGKT VR+A R+L E L + +NGAEILS G EA LR F+ ++ SAR +FLDE DAL RD +R +AQLLTLMDG K +LVFGATN P +DPALRRPGRFDRE+AL PPD+ AR ILR HL V + + V +A KC+GYVGADLA+L RQA +LA +Q A P ++AF G R P+ G D L AM AS+LRG + W+DIGG+E+ K L+QAVEWP+ E F R+ L PPRGILL+GPPGCSK+T+VRA A A+ ATF+ LS ADVFSPY G+AEAA+RQ F AR A PA++F DEIDAIV KRE G SG S ++LR VL+T L EMDGV + D ++V+GATNRP+ +D ALLRPGRFD+V+Y PLP + RR I +HT+ + +VD +A + +GAE+E +CREAA+ ++RE
Sbjct: 242 LPKGVLLSGPPGVGKTLLVRTAT---RKLQGECSLRL------RVINGAEILSHGVGEAEATLRAIFAEGRTFAATSAR------------HVFCVFLDELDALCPVRDTSARAH-----SRIVAQLLTLMDGVEAKLASPRLLVFGATNL-PNAIDPALRRPGRFDREIALRPPDVLARELILRVHLAKVPLPPHTTVDAVAALLAPKCIGYVGADLASLCRQACVLACARQQTSRAGPPQILRFLRNQAFSAMYWGYCRWPSASPSDGDDGLYVTPADFVEAMALTPASALRGAKTFSKEASATVTWADIGGLEDVKLALQQAVEWPLQFPETFRRLCLKPPRGILLYGPPGCSKSTIVRACAFASHATFLTLSAADVFSPYFGDAEAAIRQVFRDARAATPAIIFMDEIDAIVSKREFAEG-GSGGSGMALR-----------VLSTLLNEMDGVEAT--DGLLVIGATNRPDMIDAALLRPGRFDRVIYVPLPKAEDRRHILTIHTQHAHLG-PDVDLAAIADRTPFFSGAELENVCREAALLALRE 750
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A067D2K8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2K8_SAPPC) HSP 1 Score: 378 bits (970), Expect = 6.070e-111 Identity = 254/552 (46.01%), Postives = 323/552 (58.51%), Query Frame = 1
Query: 1864 VPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDS-HVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKV---VGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGST-----SEAFCPPGGGAGR----AEEGEPAVGADV----LAAAMEKVGASSLRGHHVTVPDTP----WSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+P+GVLL+GPPGVGKT VR+A ++ GE Q+ +NGAEILS G EA LR F+ R F R +FLDE DAL RD +R +AQLLTLMDG + + VLVFGATN P +DPALRRPGRFDRE+AL PPD AR ILR HL+ + + V + V +A KC+GYVGADLA+L RQA ++A R+Q P ++ F G R A+E GA V AM AS+LRG ++ W+DIGG+E+ K L+QAVEWP+ E F R+ L PPRGILL+GPPGCSK+T+VRA A A+ ATF+ LS ADVFSPY G+AEAA+RQ F AR A PA++F DEIDAIV KR+ G SG S ++LR VL+T L EMDGV + D ++V+GATNRP+ +D ALLRPGRFD+V+Y PLP R I +HT + + VD +A S +GAE+E +CREAA+ ++RE
Sbjct: 243 LPKGVLLSGPPGVGKTLLVRTATRKLQ------GECHLQL---HVINGAEILSRGVGEAEATLRAIFAEG------------RAFTATSQRHVFCLFLDELDALCPARDTSARAH-----SRIVAQLLTLMDGIDAKDTAPRVLVFGATNL-PNAIDPALRRPGRFDREVALRPPDAAAREAILRVHLRQIPLPAHVSRDDVAALLAPKCIGYVGADLASLCRQACIIACRRQETSRTPPPRILRFLRNQQFSAMYWGYCRWPSTADENPDDDGAFVTPQDFVNAMALTPASALRGAKTFTKESSATVTWADIGGLEDIKLSLQQAVEWPLQFPETFARLNLKPPRGILLYGPPGCSKSTIVRACAYASHATFLTLSAADVFSPYFGDAEAAIRQVFRDARAATPAIIFMDEIDAIVSKRDFAEG-GSGGSGMALR-----------VLSTLLNEMDGVEAT--DGLLVIGATNRPDMIDAALLRPGRFDRVLYVPLPEASDRLHILTIHTAHAQLSGD-VDLMAIAHSSPYFSGAELENVCREAALLALRE 752
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: W4FG81_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG81_9STRA) HSP 1 Score: 373 bits (957), Expect = 7.350e-109 Identity = 250/562 (44.48%), Postives = 328/562 (58.36%), Query Frame = 1
Query: 1864 VPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQ-WEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEGVI---NAVALKCVGYVGADLAALARQAVLLAARKQG----------------VLLAQPGSTSEAFCPPGGGAGRAEE------GEPAVGADVLAAAMEKVGASSLRGHHVTVPD-----TPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+P+GVLL+GPPGVGKT VR+A+ R +S + +V +NGAEILS G +A ALR+ F ++R S R +FLDE DAL RR+ G +R +AQLLTLMDG + +S +LVFGATN P +DPALRRPGRFDRE+ + P Q RA+I + HLK V + V N +A CVG+VGAD+AAL RQA ++A + G L A + S + A +E P V A+E V AS+LRG H T WSDIGG++ K L+QAVEWP+ E F R+ L PPRGILL+GPPGCSK+T+VRA A A+ ATF+ LS A+VFSPY G+AEAA+RQ F AR A PA++F DEIDAIV KR +G + G E RVL+T L EMDGV + D ++V+GATNRP+ +D ALLRPGRFD+VVY PLP +D R +I ++HT+ ++ NVD + +A + +GAE+E +CREAA+ ++RE
Sbjct: 256 LPKGVLLSGPPGVGKTLLVRTAIR--RCHASGACHLMLRV-----INGAEILSGGGIGDAERALRDLFDQGRAFTRQS------------NRHVFCLFLDELDALCPRREASGRSH-----SRIVAQLLTLMDGVDASTNSRMLVFGATNL-PHSIDPALRRPGRFDREVVVHAPHAQDRAEIFKVHLKRVPLEPPLAVATLSNDLADLCVGFVGADIAALCRQACMIALTRVGNERHQTPQMLKFLRNQQLSAMYWNNSSSSDMDALMAKALDELSLTTSKPPTVSFADFTHALEFVQASALRGAHTFSKTSQSKVTTWSDIGGLDSVKTSLQQAVEWPLKFPETFQRLALKPPRGILLYGPPGCSKSTIVRACAFASHATFLSLSAAEVFSPYFGDAEAAIRQIFRDARAATPAIVFMDEIDAIVTKRNFEQGGSGGSGM------------ELRVLSTLLNEMDGVEA--ADGLLVIGATNRPDMIDAALLRPGRFDRVVYVPLPDQDDRFKILQIHTKHASLST-NVDLKWVAAQTPMFSGAELENVCREAALLALRE 777
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A024UL99_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL99_9STRA) HSP 1 Score: 371 bits (952), Expect = 1.440e-107 Identity = 253/582 (43.47%), Postives = 337/582 (57.90%), Query Frame = 1
Query: 1864 VPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKV---VGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPP--------------------------------GGGAGRAEEGEPAVGADVLAA-----------AMEKVGASSLRGHHVT--VPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKRE---GGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+P+GVLL+GPPGVGKT VR+A T R +S + + +V +NGAEILS G +A ALR F+ +++ S +FLDE DAL RRD G +R +AQLLTLMDG A S +LVFGATN P +DPALRRPGRFDRE+AL PD+ R +I + HLK V + + V A+A +CVG+VGAD+AAL RQA ++A LA+ G+ + P GG ++ A+ +A A+E V ASSLRG + T W+DIGG++ K L+QAVEWP+A ++F R+GL PPRGILL+GPPGCSK+T+VRA A A+ ATF+ LS A VFSP++G+AEAA+RQ F AR A PA++F DEIDAIV KRE GGRG + E RVL+T L EMDGV + D ++V+GATNRP+ +D ALLRPGRFD+VVY PLP E R +I ++HT+ + ++ VD LA ++ +GAE+E +CREAA+ ++R+
Sbjct: 305 LPKGVLLSGPPGVGKTLLVRTA--TARCQASGICQLMLRV-----INGAEILSGGIGDAEAALRTLFADGREFTKQSQT------------HVFCLFLDELDALCPRRDASGRAH-----SRIVAQLLTLMDGVD-ASQSRMLVFGATNL-PNAIDPALRRPGRFDREVALRAPDVGDRVEIFKVHLKHVPLERPLTVHAVSTALADQCVGFVGADIAALCRQACMIA-------LARIGTAGKTHTPQILKFLRNQQLSAMYWTNYTTHQPTLDLCHGVKTGGWYSIDDKTVALAQLSVAPKTVVTMADFTDAIEFVQASSLRGANTIRKSKSTTWTDIGGLDAVKTSLQQAVEWPLAFPDSFSRLGLKPPRGILLYGPPGCSKSTIVRACACASHATFLSLSAAHVFSPFVGDAEAAIRQIFRDARAATPAIIFMDEIDAIVTKREFEQGGRG---------------GSGMELRVLSTLLNEMDGVEA--ADGLLVIGATNRPDMIDAALLRPGRFDRVVYVPLPDESDRHKILQIHTKHAALAKD-VDLMWLAHEADMFSGAELENVCREAALLALRD 835
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A836B8Q3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B8Q3_9CHLO) HSP 1 Score: 363 bits (931), Expect = 4.430e-107 Identity = 253/606 (41.75%), Postives = 339/606 (55.94%), Query Frame = 1
Query: 1762 KVSMSPT--DALVELMLLPMTAAKPAREGSTPLEFLVPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGF------------------HKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPPGGGAGRAE------------------EGEP---AVGADVLAAAMEKVGASSLRGHHVTVPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
+++ +PT AL EL+ P+ A +GS L PRG+LL GPPG GKT V++ +++E G L V A + E+ LRE F+AA+ +A R A++FLDE DAL RRD G +R +AQLLTL+DG A+ H++V GATN RP LDPALRRPGR DRE+ + PD RADILR H +G+++ G + + AVA C GY GADLAA R+A + A + G +S G G G A G P V A LA AM+KV S +RG V +P W D+GG++E K +LRQAVEWP+ + AF+R+GL+ PRG+LL GPPGCSKTTL RAAATA+GATF+ LS A +F Y+GE EAA+R F AR AAP+++F DEIDA+ +RE G G++SG + A R+L T LTEMDG+ G V+V+GATNRP AVD ALLRPGRF ++Y P P ++ R EVH+R++ + +VD +A ++ TGAE+ +CREAA++++RE
Sbjct: 47 RIAGNPTALQALRELVAWPVRFAA---QGSA-LGVRWPRGLLLHGPPGCGKTLLVQA-------VAAEAGAVLHVV------TAARVTGAYTGESERRLREVFAAAQ--------------ADADAGRVALVFLDEVDALCPRRD-----GGRSHDSRVVAQLLTLLDGAATGRATGLQGQQXXXQAASTAQKGHLVVVGATN-RPNALDPALRRPGRLDREVLVALPDATQRADILRLHTRGLQL-GPDVDLAAVAAACHGYSGADLAAATREAAMAALAEVAAAAYGLGGSSAITADGGAGDGAATATAGFAGSGLGGLLSMSMSGPPPALVVRAAHLATAMKKVRPSIVRGAEVDIPPVSWDDVGGLDEVKRRLRQAVEWPLVHAAAFERLGLSAPRGVLLHGPPGCSKTTLARAAATASGATFLALSCAQLFCMYVGEGEAALRDCFKRARAAAPSIIFLDEIDAVAGRREEG-GESSGGA--------GGPDAGVRLLTTLLTEMDGIELAAG--VLVLGATNRPGAVDPALLRPGRFTTLLYVPPPDQEGRVAALEVHSRKLPLA-PDVDLEAVAAQTDNYTGAELAAVCREAALAALRE 602
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: H3G5T1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T1_PHYRM) HSP 1 Score: 357 bits (916), Expect = 2.880e-106 Identity = 234/569 (41.12%), Postives = 318/569 (55.89%), Query Frame = 1
Query: 1786 ALVELMLLPMTAAKPAREGSTPLEFLVPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEG-----------VINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPPGGGAGRAEEGEPAVGADVLAAAMEKVGASSLRGHHVTVPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKRE-GGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
AL EL+LLP+ P +EF P+GVLL GPPGVGKT VR+ V R+ G TL Q +NG+EIL+ G+ +A +ALR F A +R + +VIF+DE DAL +R+ G A +R +AQLLTL+DG +V A + P +DPALRRPGRFDRE+ + PP+ R I + HL G ++ +A K V YVGAD+AAL R+A ++A+ +Q V L + + + A EP G + E+ G W+ IGG E K L+QA+EWP+ E F R+G+ PPRG+LL+GPPGCSK+++VRAAA ++GATF+ LS A VFSP+ G+AEAAVRQ F AR A PA++FFDEID +V KRE G G G S ++R VL+T L EMDGV S G ++V+GATNRP +D AL+RPGRFD++++ LPAE R I +H+ M + ++VD LA + +GAE+E +CREAA+ +RE
Sbjct: 1 ALRELILLPVV--HPRLRSDLGVEF--PKGVLLCGPPGVGKTLLVRAVVHECRQEQDVSGATLDL--NLQVINGSEILTSGRGDAEQALRSTFEMAVIHARSARHA------------ASVIFIDELDALCPKREAAGGGASSAH-SRIVAQLLTLLDGVEGGLSRENVVVVAATNLPNSIDPALRRPGRFDREIFVAPPNTSLRKKIFQVHLNRTPYALSSGSLDNAEQQCDAFLDTLAAKAVAYVGADIAALCREAAMVASTRQLVALTRDRELEQWW------ADWKRRVEPLSGVQSSSKDFERQG---------------WNSIGGQAETKLALQQALEWPIKFPETFARLGVKPPRGLLLYGPPGCSKSSIVRAAAHSSGATFLSLSAAQVFSPFFGDAEAAVRQVFRDARAALPAIIFFDEIDVMVAKREFDGSGGGEGGSSTAMR-----------VLSTMLNEMDGVESAEG--LLVIGATNRPACIDAALMRPGRFDRILFVDLPAEPDRADILRIHSHPMQLH-DDVDVPTLASRTPYFSGAELENLCREAALLVLRE 515
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A835Y068_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y068_9CHLO) HSP 1 Score: 361 bits (927), Expect = 3.960e-106 Identity = 249/589 (42.28%), Postives = 326/589 (55.35%), Query Frame = 1
Query: 1786 ALVELMLLPMTAAKPAREGSTPLEFLVPRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDS----------------------------HVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEGVINAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPPGGGAGRAEEGEP----AVGADVLAAAMEKVGASSLRGHHVTVPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
AL EL+ P+ A R L PRG+LL GPPG GKT V++ +++E G L + S+ ++ E+ LREAF+AA+ +A R AV+FLDE DAL RRD G R +AQLLTL+DG + H++V GATN RP LDPALRRPGR DRE+ + PD RADILR H +G+++ + + AVA GY GADLAA AR+A + A + +EA+ GGG A P V LAAA+ KV S +RG V +P W D+GG+E+ K +LRQAVEWP+ + +AF+R+GL PRG+LL GPPGCSKTTL RAAATA+GAT + +S A +FS Y+GE EAA+R AF AR AAPA+LF DE++++ KRE G G ++G LR +L T LTEMDG+ G V+V+GATNRP A+D ALLRPGRF +Y P P E R VH RR+ + + VD LA +EG TGAE+ +CREAA++++RE
Sbjct: 89 ALRELVCWPVRFAAEGRA----LGVRWPRGLLLHGPPGCGKTLMVQA-------VAAEAGAALHVLTSSR------VVGAFTGESERRLREAFAAAQ--------------ADADAGRVAVVFLDEVDALCPRRD-----GGRSHDTRLVAQLLTLLDGAATGRPTGLTAPPXXXXXXXXXXXXXXXXXXXCSGHLVVVGATN-RPNALDPALRRPGRLDREVMVALPDTVQRADILRLHTRGLQLAA-DADLTAVAAAAHGYSGADLAAAAREAAMAAXXEV---------AAEAYGIGGGGGPAALGSGPLPPLVVRGAHLAAALRKVRPSIVRGAEVDIPPVSWDDVGGLEDVKRRLRQAVEWPLRHADAFERLGLAAPRGVLLHGPPGCSKTTLARAAATASGATLLAMSCAQLFSMYVGEGEAALRDAFKRARMAAPAILFLDEVESVAGKREEGGGGSAGGPDAGLR-----------LLTTLLTEMDGIELAAG--VLVLGATNRPGALDPALLRPGRFSTHLYVPPPDEPGRAAALAVHCRRLPLGAD-VDLGGLAARTEGYTGAELAAVCREAALAALRE 616
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Match: A0A167MTA3_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167MTA3_PHYB8) HSP 1 Score: 358 bits (918), Expect = 5.270e-106 Identity = 221/531 (41.62%), Postives = 308/531 (58.00%), Query Frame = 1
Query: 1867 PRGVLLTGPPGVGKTFAVRSAVETVRELSSERGETLFQVPKSQKLNGAEILSLGQWEACEALREAFSAAENWSRDSARGRQRGFPNAIGRRCAVIFLDEADALLARRDRDGDKAGGGDGARALAQLLTLMDGFHKAEDSHVLVFGATNSRPGDLDPALRRPGRFDRELALPPPDLQARADILRHHLKGVKVVGGEGV-INAVALKCVGYVGADLAALARQAVLLAARKQGVLLAQPGSTSEAFCPPGGGAGRAEEGEPAVGADVLAAAMEKVGASSLRGHHVTVPDTPWSDIGGMEEAKAKLRQAVEWPVANKEAFDRMGLTPPRGILLFGPPGCSKTTLVRAAATAAGATFVCLSGADVFSPYLGEAEAAVRQAFVLARNAAPALLFFDEIDAIVCKREGGRGKASGDSYISLRQKGSSNSAESRVLATFLTEMDGVGSLRGDNVIVVGATNRPEAVDRALLRPGRFDQVVYAPLPAEDARRQIFEVHTRRMTMDRENVDFRKLAKVSEGLTGAEIEGICREAAMSSIRE 3456
P+G+LL GPPGVGKTF V S E G +F + G EI E+ E LR+ F A+ W+ ++ ++F+DE DAL RDR R +AQLLTLMDG A +++ GATN RP +DPALRRPGRFDRE+++ PD R ++ L+ + + E V I +A GYV AD+ +L R+A + A +K LA+ E V + A VG S RG V V T W DIGG+E+ K KL+QAVEWP+ +K++F R+GL PPRGILL+GPPGCSKTTLV+ A+++GA F+ ++GA ++SPY+G++E +R F AR +AP+++F DE +AIV KR+ G G GDS + RVL+T L EMDGV + ++V+VVGATNRP+ +D ALLRPGRFD++VY P P AR +I ++HTRR+ + E+V+ +A ++ TGA+++ +CREAAM S+RE
Sbjct: 108 PKGILLYGPPGVGKTFLVTSVAEAC-------GAKVFII------QGPEIYGPYLGESEEKLRDKFKEAQGWASENDSP-------------VILFIDEIDALTPHRDRAQSHEN-----RVVAQLLTLMDGI--ASRGRLVIIGATN-RPNSIDPALRRPGRFDREISIDAPDKGTRHALITSQLRSMPI--DESVDIETLATMTNGYVAADITSLCREAAMHAVQKATKDLAK---------------------EMYVSMEDFMVAFGSVGPSMQRGFQVQVEQTGWDDIGGLEDVKKKLKQAVEWPILHKDSFIRLGLKPPRGILLYGPPGCSKTTLVKVIASSSGAAFLSINGAQLYSPYVGDSEKIIRTTFQKARASAPSIIFLDETEAIVGKRDMGNGGGGGDSV------------QERVLSTLLNEMDGVET--AESVLVVGATNRPDMLDAALLRPGRFDRLVYVPPPDFKARWEILKIHTRRIPLS-EDVNLEVVADCTDYYTGADLQNVCREAAMISLRE 566 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1020.194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig1020.194.1 >prot_S-latissima_F_contig1020.194.1 ID=prot_S-latissima_F_contig1020.194.1|Name=mRNA_S-latissima_F_contig1020.194.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=1206bp MVLLDPAHLQLYGVDATLSSFNQPPKTAASTDPVPPASAENPLTTTPAETback to top mRNA from alignment at S-latissima_F_contig1020:129023..162180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig1020.194.1 ID=mRNA_S-latissima_F_contig1020.194.1|Name=mRNA_S-latissima_F_contig1020.194.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=33158bp|location=Sequence derived from alignment at S-latissima_F_contig1020:129023..162180+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig1020:129023..162180+ >mRNA_S-latissima_F_contig1020.194.1 ID=mRNA_S-latissima_F_contig1020.194.1|Name=mRNA_S-latissima_F_contig1020.194.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=7236bp|location=Sequence derived from alignment at S-latissima_F_contig1020:129023..162180+ (Saccharina latissima SLPER63f female)back to top |