mRNA_S-latissima_F_contig102.191.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig102.191.1
Unique NamemRNA_S-latissima_F_contig102.191.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A836CP10_9STRA (Fructose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP10_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 4.430e-172
Identity = 240/331 (72.51%), Postives = 279/331 (84.29%), Query Frame = 3
Query:  108 DPDQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEY 1100
            DPD V    + TL++F+MR T D+ LAILMNAI +SCK+ITRAVRKAGIA LYGLAGT+NS+GD VKKLD+LSNEIMI+ALT SH+C+VLVSEENE+PIII+    GKYCVAFDPLDGSSNIDCNVSTGTIFAVY+K     GNI DV+R G D+KVAGYCMYG+ATEL++TFYGSGVHRFTLDPSLGEFIH+ ++V++P +PK IYSCN+GN+  WD  I+R V G  +   P+A RYVGSMVSDVHRTLLYGG+FLYPADKKS  GKLRVLYEGFPMALIIEQAGG ASTGMFNGSI RVLEI P  IH++CPI++G P  V+ +L EY
Sbjct:    9 DPDSVTDVKSITLTSFIMRHTRDNNLAILMNAIQLSCKSITRAVRKAGIANLYGLAGTENSTGDAVKKLDLLSNEIMINALTHSHVCSVLVSEENEDPIIIKENMQGKYCVAFDPLDGSSNIDCNVSTGTIFAVYEKKEGSVGNIEDVMRAGIDLKVAGYCMYGTATELIITFYGSGVHRFTLDPSLGEFIHVASDVKMPTEPKKIYSCNQGNYGGWDAPIQRYVDGITAGDKPYALRYVGSMVSDVHRTLLYGGIFLYPADKKSRGGKLRVLYEGFPMALIIEQAGGMASTGMFNGSIQRVLEIKPTSIHDKCPIILGTPSMVESVLKEY 339          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A6U4JRS6_9STRA (Fructose-bisphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JRS6_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 1.090e-151
Identity = 221/337 (65.58%), Postives = 268/337 (79.53%), Query Frame = 3
Query:  108 DPDQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIG--DVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESP-PWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQA 1109
            DPD V  +S PTL+AF    +GD +L ++MNA +++CKAI RAVRKAGIAGLYGLAGT+NSSGD VKKLD+LSNE+MISAL +S   A L+SEENE+PI+     SG++ VAFDPLDGSSNIDCNVSTGTIF+V+++ +A G      D+L+ GTDI  AGYCMYGSATE V TF   GVH FTLDPSLGEFIH  A+++IP++PK IYS NEGNF  WD EI+ AV  FK+  P P+ QRYVGSMVSDVHRT+LYGG+FLYPAD+KS  GKLRVLYEGFPM L++++AGG ASTGMF GSI  V EI P+ IHERCPI++GN  FVD++LA Y+ +
Sbjct:   11 DPDAVGTSSLPTLTAFFQEKSGDSDLTLVMNATALACKAIARAVRKAGIAGLYGLAGTENSSGDDVKKLDLLSNEMMISALMQSGKVAALISEENEDPILAPAASSGRFIVAFDPLDGSSNIDCNVSTGTIFSVWERKTAPGTEATEEDILQPGTDIVCAGYCMYGSATEFVCTFSTCGVHCFTLDPSLGEFIHTRADMKIPSKPKRIYSANEGNFAHWDPEIQEAVNSFKNAEPKPFTQRYVGSMVSDVHRTILYGGVFLYPADRKSPNGKLRVLYEGFPMCLLVKEAGGKASTGMFMGSIRDVTEIDPESIHERCPIILGNTEFVDQVLAHYESS 347          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: W7TP29_9STRA (Fructose-bisphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP29_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 3.000e-151
Identity = 214/328 (65.24%), Postives = 264/328 (80.49%), Query Frame = 3
Query:  129 TSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAV--GGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQ 1106
            T T TL  F++ +T D +L +LM +I + CK+I RAVRKAGIAGLYGL G++N SGD VKKLD+LS+EI ++ L ESH CAVLVSEE ++PII+E  K+GKYCVAFDPLDGSSNIDCNVSTGTIFA+Y++ISA     ++ D+LR GT I  AGYCMYGSAT+LV+TF G GVHRFTLDP+LGEFIH +  V++PA+PK IYSCNEGN+  WD+ ++ AV  FK + PP+A RYVGSMVSDVHRTLLYGG+FLYPAD+KS  GKLRVLYEGFPMA I+E AGG A+TG+F G I RVL++ P ++H+RCPI++G P  V R+L  Y Q
Sbjct:   13 TDTKTLQRFIISATKDIQLTLLMTSIQMGCKSIARAVRKAGIAGLYGLHGSENVSGDQVKKLDVLSDEIFVNCLKESHCCAVLVSEERDDPIIVEAAKAGKYCVAFDPLDGSSNIDCNVSTGTIFAIYERISASDQSPSVTDILRAGTAIVAAGYCMYGSATDLVLTF-GHGVHRFTLDPTLGEFIHTQGPVKLPAKPKHIYSCNEGNYSLWDDAMRAAVDAFKHQDPPYAARYVGSMVSDVHRTLLYGGIFLYPADRKSKIGKLRVLYEGFPMAKIVEDAGGIATTGLFQGKIQRVLDLHPSNVHDRCPIILGTPSDVQRVLDVYAQ 339          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A7R9YJ70_DIALT (Fructose-bisphosphatase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YJ70_DIALT)

HSP 1 Score: 446 bits (1148), Expect = 8.560e-151
Identity = 224/359 (62.40%), Postives = 267/359 (74.37%), Query Frame = 3
Query:   84 GNMASRPQD-PDQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQP-KTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQA*ESRVYTLGYPGTRP 1154
            G+M+S  +D  D VD+ +  TLS FVM +T D EL ILM AI+++CKA  RA RKAGIA L+GLAG  N+SGD  KKLD+LSN+I ++AL   H CAVLVSEENE+PII+     GKYCVAFDPLDGSSNIDCNVSTGTIF VY+K     G + D+LRKG D+ VAGYCMYG+ATELV+ F G GVHRF LDPS+GEFIH  ANV+ PA   K IYS NEGN   WDE  +RAV  FKS   P+A RYVGSMVSDVHRTLLYGG+F+YPADKKS  GKLRVLYEGFPMA+I+E AGG ASTG+FNG I R++++ PK +HERCP+++G+   V+ +L  Y  A          PGT P
Sbjct:   13 GSMSSSVRDNSDDVDQVNYKTLSRFVMANTADQELTILMGAIALACKATARACRKAGIANLFGLAGEQNTSGDDQKKLDVLSNDIFVNALLNCHACAVLVSEENEDPIIVPPSMQGKYCVAFDPLDGSSNIDCNVSTGTIFGVYEKTIPGPGTVDDILRKGKDLVVAGYCMYGAATELVICFQGRGVHRFALDPSIGEFIHTHANVKFPADGGKKIYSANEGNSGLWDEPCQRAVAHFKSGDKPYALRYVGSMVSDVHRTLLYGGVFIYPADKKSPGGKLRVLYEGFPMAMIVEAAGGVASTGLFNGKIHRMMDLEPKGVHERCPVILGSERDVNLVLGFYDTA------AAAPPGTLP 365          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: F0YHW0_AURAN (Fructose-bisphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHW0_AURAN)

HSP 1 Score: 437 bits (1124), Expect = 7.780e-148
Identity = 210/332 (63.25%), Postives = 266/332 (80.12%), Query Frame = 3
Query:  108 DPDQVDK-TSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEY 1100
            D + V+K     TLS+F+M  T D E+ ILMNA+ +SCK I RA RKAG+A LYGLAGT+N+SGD VKKLD+LSNEIM++ALT S +CA+LVSEE E+PI++   K GKYCVAFDPLDGSSNIDCNVSTGTIF+VY + +A   +I D+LR GT++  AGYCMYGSAT+ V++F G GVHRFTLD S+GEF +    ++IP +PKTIYSCNEGN+  WD+EI+ A   FK+   P++ RYVGSMVSDVHRTLLYGG+F YPADKKS KGKLRVLYEG+PMAL+ EQAGG ASTG F G +GR+++++P++IH+RCPI++G P  V  +L++Y
Sbjct:    2 DVENVEKDVDKRTLSSFIMSETKDLEMTILMNAVQLSCKLIARACRKAGVASLYGLAGTENASGDDVKKLDVLSNEIMVNALTNSCVCALLVSEEEEDPIVVPANKRGKYCVAFDPLDGSSNIDCNVSTGTIFSVYARSTAGEPSIADILRPGTEMVAAGYCMYGSATDFVVSF-GDGVHRFTLDDSVGEFCYF-GQLKIPEKPKTIYSCNEGNYSLWDKEIQEATDAFKAGPKPYSARYVGSMVSDVHRTLLYGGVFYYPADKKSAKGKLRVLYEGYPMALLTEQAGGVASTGRFRGKVGRIMDVVPENIHDRCPIIMGCPRDVAMILSKY 331          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A812J072_9DINO (Fructose-bisphosphatase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812J072_9DINO)

HSP 1 Score: 429 bits (1102), Expect = 3.710e-144
Identity = 210/331 (63.44%), Postives = 256/331 (77.34%), Query Frame = 3
Query:  114 DQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIP-AQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYK 1103
            D V  +  PTL+ +VM  T D+ELAIL+ A+ ++CKA +RA  KAGIA L+GLAG  NS+GD  KKLD+LSNEI I ALT    C++LVSEENEEPI +   K+G++ VAFDPLDGSSNIDCNVSTGTIFAVY+K S     + D+LR G DI VAGYCMYG+ATELV+TF G GVHRFTLDPSLGEF+HI+A++++P    K IYSCNEGN  +WD  IK  V  +K    P+A RYVGSMVSDVHRT+LYGG++LYPAD KS +GKLRVLYEGFPMA I+EQAGG AS G+F G + R+L+I+PK IHE+CP+VIG    V+ +L EYK
Sbjct:   20 DSVSVSQFPTLTRYVMAKTHDNELAILLMALQLACKATSRACNKAGIAMLFGLAGEVNSTGDDQKKLDVLSNEIFIDALTNCGACSILVSEENEEPIFVPQDKAGRFVVAFDPLDGSSNIDCNVSTGTIFAVYEKTSDKPATVDDILRTGNDIMVAGYCMYGAATELVITFKGHGVHRFTLDPSLGEFVHIQAHIKMPEGGGKKIYSCNEGNSRNWDAAIKSIVAKWKDSDKPYAARYVGSMVSDVHRTILYGGIYLYPADAKSAQGKLRVLYEGFPMAFIMEQAGGAASCGLFKGKLQRLLDIVPKSIHEKCPVVIGCNRDVEAVLNEYK 350          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A7S4GJ99_9EUGL (Fructose-bisphosphatase n=2 Tax=Eutreptiella TaxID=73024 RepID=A0A7S4GJ99_9EUGL)

HSP 1 Score: 430 bits (1106), Expect = 4.230e-144
Identity = 215/357 (60.22%), Postives = 264/357 (73.95%), Query Frame = 3
Query:   63 AIACVEKGNMASRPQDP---------DQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIP-AQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYK 1103
            A+A  +    A+ P  P         D V  +  PTLS F+M  T D EL IL+NA++++CKA  RA  KAGIA L+GLAG  NS+GD  KKLD+LSN+I I+AL     CAVLVSEENEE II++   +G++CVAFDPLDGSSNIDCNVSTGTIFAVY+K  A   +  D+LR G DI VAGYCMYG+ATELV+TF G GVH FTLDPSLGEFI  +A+++IP    K IYSCNEGN  +WDE IK+AV  FK    P+A RYVGSMVSDVHRT+LYGG+++YPAD KS  GKLRVLYEGFPMA+I+EQAGG AS GMF G+I R+L+I+P DIH +CP+++G    V+ +L +YK
Sbjct:   42 AVATSKPAPPAATPSPPGSPLIASGADSVTTSDYPTLSRFIMSQTHDQELTILLNALALACKATARACNKAGIADLFGLAGEVNSTGDDQKKLDVLSNDIFINALANCGACAVLVSEENEECIIVDQANAGRFCVAFDPLDGSSNIDCNVSTGTIFAVYEKKGAGPASAEDILRTGNDIVVAGYCMYGAATELVVTFKGKGVHGFTLDPSLGEFILTKADMKIPEGGGKKIYSCNEGNSSNWDEPIKKAVAAFKDPKKPYAARYVGSMVSDVHRTILYGGIYIYPADAKSKNGKLRVLYEGFPMAMIVEQAGGVASCGMFKGTIQRMLDIVPSDIHAKCPVILGAARDVNFVLDQYK 398          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A0U4MTX7_EUGGR (Fructose-bisphosphatase n=1 Tax=Euglena gracilis TaxID=3039 RepID=A0A0U4MTX7_EUGGR)

HSP 1 Score: 425 bits (1092), Expect = 8.940e-141
Identity = 207/347 (59.65%), Postives = 263/347 (75.79%), Query Frame = 3
Query:   69 ACVEKGNMASRPQDPDQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQP-KTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQ 1106
            A  +   ++S  +  D V  +   TL  ++M ++ D ELA+L++A+S++CKA  RA  KAGIA L+GLAG  N++GD  KKLD+LSN+I I+ LT S  CAVLVSEENEEPIII+   +G++CVAFDPLDGSSNIDCNVSTGTIF VY++IS     + D+LR G D+ VAGYCMYG+ATELV+TF   GVHRFTLDPSLGEFIH  +NV  P    K IYSCNEGN  +WD  IK +V  FK+ S P+A RYVGSMVSDVHRT+LYGG++LYPAD KS  GKLRVLYEGFPMA+I+EQAGG AS G+F G+I R+L+++P  IHE+CP+++G    V  +L++YK+
Sbjct:  131 ASPQTPTVSSLNRAADSVATSDFLTLQRYIMLTSKDQELAVLLSALSLACKATARACNKAGIALLFGLAGETNATGDDQKKLDVLSNDIFINTLTNSGTCAVLVSEENEEPIIIDPAHAGRFCVAFDPLDGSSNIDCNVSTGTIFGVYERISTGFATVDDILRTGNDLIVAGYCMYGAATELVITFKNQGVHRFTLDPSLGEFIHTHSNVTFPEDGGKKIYSCNEGNSSNWDPAIKASVEYFKAGSKPYAARYVGSMVSDVHRTILYGGIYLYPADAKSKNGKLRVLYEGFPMAMIVEQAGGVASCGLFKGTIQRLLDLVPTSIHEKCPVILGGERDVKLVLSKYKE 477          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A7S2XC16_9EUKA (Fructose-bisphosphatase (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XC16_9EUKA)

HSP 1 Score: 421 bits (1081), Expect = 9.440e-140
Identity = 203/334 (60.78%), Postives = 260/334 (77.84%), Query Frame = 3
Query:  114 DQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFK---SESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQ 1106
            D V +    TLS+F+M  T D +LA+LM A+ I+CK I RAVRKAGIAGL+G+AGT N++GD VKKLD+LSN ++I+AL +S +CAVLVSEE  EPI++    +G++CVAFDPLDGSSNIDCNVSTGTIF++++K S+      D+LR G+D+  AGYCMYGSATELV+TF   GV RF LDPSLGEFIHI + ++IP + K IYSCNEGNF  WD EI+ AV  FK   +   P++ RYVGSMVSDVHRT+LYGG+F+YPADKKS  GKLR+LYEGFPMAL++EQAGG A+TG F GS+ R+L++ P  IHERCP+++G    V+ +L  Y++
Sbjct:    3 DNVVEADRTTLSSFIMMQTKDPDLALLMTAMEIACKGIARAVRKAGIAGLFGMAGTRNATGDQVKKLDLLSNLLVINALKKSRVCAVLVSEEEPEPILMPESDAGRFCVAFDPLDGSSNIDCNVSTGTIFSIFEKTSSGPPKRSDILRSGSDMVAAGYCMYGSATELVVTFR-RGVERFILDPSLGEFIHIGSTMQIPRKGKKIYSCNEGNFTKWDTEIQEAVQNFKQPTNREKPYSLRYVGSMVSDVHRTMLYGGIFMYPADKKSRNGKLRILYEGFPMALLVEQAGGLATTGYFRGSVKRILDLTPNGIHERCPVILGCHRDVEPVLRRYEK 335          
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Match: A0A6V2TW06_HETAK (Fructose-bisphosphatase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TW06_HETAK)

HSP 1 Score: 416 bits (1069), Expect = 2.450e-139
Identity = 206/331 (62.24%), Postives = 254/331 (76.74%), Query Frame = 3
Query:  114 DQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAVRKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEENEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGNIGDVLRKGTDIKVAGYCMYGSATELVMTF-YGSGVHRFTLDPSLGEFIHIEANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESP-PWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGMFNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEY 1100
            D    T   TL+  +M ST D ++AILM+AI +SCK ITRAVRKAGIA LYGLAG +N++GD VKKLD++S+E+M +AL    +CAVLVSEE E+PII+   K GKY VAFDPLDGSSN+DCNVSTGTIF V++K         D L  G ++ VAGYCMYG+AT+LV+ F  G+GVHRFTLDPS+GEF+H  A++ IPA PKTIYS NEGN+ SWD  I+ AV GFK   P P+  RYVGSMVSD+HRTLLYGG++LYPADKKS KGKLR++YEG PMAL+IE+ GG ASTGMF GS+ RVL++ P  IH R PI++GN  FV+R+ + Y
Sbjct:    3 DLKSDTEHITLTRHIMASTRDADMAILMSAIQLSCKVITRAVRKAGIADLYGLAGAENATGDDVKKLDLISDEVMCNALLNCGVCAVLVSEEQEDPIIVPESKQGKYVVAFDPLDGSSNVDCNVSTGTIFGVWEKTRPGPAVAADALDAG-ELLVAGYCMYGAATDLVVCFGAGTGVHRFTLDPSIGEFVHTLADMTIPASPKTIYSANEGNYSSWDPAIQAAVQGFKDNQPKPFTARYVGSMVSDIHRTLLYGGIYLYPADKKSPKGKLRLMYEGLPMALLIEECGGVASTGMFEGSVQRVLDLKPDTIHARSPIIMGNREFVERVTSLY 332          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig102.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CP10_9STRA4.430e-17272.51Fructose-bisphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A6U4JRS6_9STRA1.090e-15165.58Fructose-bisphosphatase n=1 Tax=Phaeomonas parva T... [more]
W7TP29_9STRA3.000e-15165.24Fructose-bisphosphatase n=2 Tax=Monodopsidaceae Ta... [more]
A0A7R9YJ70_DIALT8.560e-15162.40Fructose-bisphosphatase n=2 Tax=Diacronema lutheri... [more]
F0YHW0_AURAN7.780e-14863.25Fructose-bisphosphatase n=1 Tax=Aureococcus anopha... [more]
A0A812J072_9DINO3.710e-14463.44Fructose-bisphosphatase n=2 Tax=Symbiodinium TaxID... [more]
A0A7S4GJ99_9EUGL4.230e-14460.22Fructose-bisphosphatase n=2 Tax=Eutreptiella TaxID... [more]
A0A0U4MTX7_EUGGR8.940e-14159.65Fructose-bisphosphatase n=1 Tax=Euglena gracilis T... [more]
A0A7S2XC16_9EUKA9.440e-14060.78Fructose-bisphosphatase (Fragment) n=1 Tax=Lothare... [more]
A0A6V2TW06_HETAK2.450e-13962.24Fructose-bisphosphatase n=2 Tax=Heterosigma akashi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig102contigS-latissima_F_contig102:540247..555146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.3
Seed ortholog evalue3.2e-120
Seed eggNOG ortholog44056.XP_009039948.1
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryother localisation
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
Ec32 ortholog descriptioncytosolic fructose-1,6-bisphosphatase
Ec32 orthologEc-17_003090.1
EC3.1.3.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons7
Model size1684
Cds size1023
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815382.0464325-UTR-S-latissima_F_contig102:540246..5408181622815382.0464325-UTR-S-latissima_F_contig102:540246..540818Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig102 540247..540818 -
1693924849.660592-UTR-S-latissima_F_contig102:540246..5408181693924849.660592-UTR-S-latissima_F_contig102:540246..540818Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig102 540247..540818 -
1622815382.13866-UTR-S-latissima_F_contig102:555057..5551461622815382.13866-UTR-S-latissima_F_contig102:555057..555146Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig102 555058..555146 -
1693924849.7543721-UTR-S-latissima_F_contig102:555057..5551461693924849.7543721-UTR-S-latissima_F_contig102:555057..555146Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig102 555058..555146 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815382.0588617-CDS-S-latissima_F_contig102:540818..5410211622815382.0588617-CDS-S-latissima_F_contig102:540818..541021Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 540819..541021 -
1693924849.6710691-CDS-S-latissima_F_contig102:540818..5410211693924849.6710691-CDS-S-latissima_F_contig102:540818..541021Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 540819..541021 -
1622815382.0707567-CDS-S-latissima_F_contig102:542148..5423381622815382.0707567-CDS-S-latissima_F_contig102:542148..542338Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 542149..542338 -
1693924849.685782-CDS-S-latissima_F_contig102:542148..5423381693924849.685782-CDS-S-latissima_F_contig102:542148..542338Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 542149..542338 -
1622815382.0832999-CDS-S-latissima_F_contig102:545568..5457121622815382.0832999-CDS-S-latissima_F_contig102:545568..545712Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 545569..545712 -
1693924849.700946-CDS-S-latissima_F_contig102:545568..5457121693924849.700946-CDS-S-latissima_F_contig102:545568..545712Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 545569..545712 -
1622815382.09232-CDS-S-latissima_F_contig102:546233..5463821622815382.09232-CDS-S-latissima_F_contig102:546233..546382Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 546234..546382 -
1693924849.711221-CDS-S-latissima_F_contig102:546233..5463821693924849.711221-CDS-S-latissima_F_contig102:546233..546382Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 546234..546382 -
1622815382.103818-CDS-S-latissima_F_contig102:547635..5477081622815382.103818-CDS-S-latissima_F_contig102:547635..547708Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 547636..547708 -
1693924849.7248106-CDS-S-latissima_F_contig102:547635..5477081693924849.7248106-CDS-S-latissima_F_contig102:547635..547708Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 547636..547708 -
1622815382.1141298-CDS-S-latissima_F_contig102:549548..5496521622815382.1141298-CDS-S-latissima_F_contig102:549548..549652Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 549549..549652 -
1693924849.732807-CDS-S-latissima_F_contig102:549548..5496521693924849.732807-CDS-S-latissima_F_contig102:549548..549652Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 549549..549652 -
1622815382.1233928-CDS-S-latissima_F_contig102:554897..5550571622815382.1233928-CDS-S-latissima_F_contig102:554897..555057Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 554898..555057 -
1693924849.7409887-CDS-S-latissima_F_contig102:554897..5550571693924849.7409887-CDS-S-latissima_F_contig102:554897..555057Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig102 554898..555057 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig102.191.1prot_S-latissima_F_contig102.191.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig102 540819..555057 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig102.191.1

>prot_S-latissima_F_contig102.191.1 ID=prot_S-latissima_F_contig102.191.1|Name=mRNA_S-latissima_F_contig102.191.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=341bp
MASRPQDPDQVDKTSTPTLSAFVMRSTGDHELAILMNAISISCKAITRAV
RKAGIAGLYGLAGTDNSSGDHVKKLDILSNEIMISALTESHMCAVLVSEE
NEEPIIIENKKSGKYCVAFDPLDGSSNIDCNVSTGTIFAVYDKISAVGGN
IGDVLRKGTDIKVAGYCMYGSATELVMTFYGSGVHRFTLDPSLGEFIHIE
ANVRIPAQPKTIYSCNEGNFDSWDEEIKRAVMGFKSESPPWAQRYVGSMV
SDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGTASTGM
FNGSIGRVLEIMPKDIHERCPIVIGNPPFVDRLLAEYKQA*
back to top

mRNA from alignment at S-latissima_F_contig102:540247..555146-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig102.191.1 ID=mRNA_S-latissima_F_contig102.191.1|Name=mRNA_S-latissima_F_contig102.191.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=14900bp|location=Sequence derived from alignment at S-latissima_F_contig102:540247..555146- (Saccharina latissima SLPER63f female)
AGGCGGCTACTACTTCTACCGAAGCTCTGCAGCAATAGCAGCAGTAGGAA CTCCAGTAGTAGGCTATTGCCTGTGTTGAAAAAGGAAATATGGCTTCGAG ACCCCAAGACCCGGACCAGGTGGACAAGACGTCCACCCCCACCCTGTCGG CGTTTGTGATGAGGAGCACCGGAGACCACGAGCTGGCCATCCTCATGAAC GCGATTTCGATCTCTTGCAAGGCCATCACGCGCGCTGTGCGCAAAGCCGG TAAGACCCCATGATGCTAGAGCTGCCCCTGACTCTTGATTATCGTGCAGG CTTCTCGTAACCTTGTTGATAATGCTGGAACCACACGGTGACTCTTTCCC ATCTGCCTCATGCCCTCTCGGGCTCGGGGTATCCCCCTCTCCTCGTTCCT CGTTGCGTACCCATCTTGCCTCATGCTCGAGGTATTTTTCTTCCGCTCTT TGTATATTCCACGGTATTCGTATACAGCAGTAGTAGTCCGTCTATTGTGC TGATTGTTCGCTATAGTGCCTGTGAAATATCTCGGCAAAGATGGGATTAA CCAGTGTGGTGTTAATAGTGTGCGAAGTAGTGGTAGTGCCGGTTGCTGCT ATAATGCCGGTGTTGTTGCCTGGCGCCCACCGGCACTACGTATAGAGGAA CCACTACGAGTACCTGTATATTTTGTTTTTGAAGAAATTGTTTATTACGT GCTTTTGGAATATGTACATATTATATGTGTTTTTTTTTTCCTCTAGTTCG TTTGATTTTTTGTTATTTCTTTCATTGTATCTATTTAATACTATGGGTTG CTGGCAAGTGTTCGTTGTGCTTGTCGCATGCAGTACGATGGCATAGCAGT GCATGCATCGTCTGCCCTCCTTACGCCTGTTCCTGCATTATAAAAAAGGA AAAGAAAAAGAAAAGCGTCTATTAAATATATACGTACCCTCCACACTCTT ACGCCGTACTGCTGTACTGCATTACACTGCTGTAGTTGGGTGGTGGCTTG CCAACCATTTTCCCGAATAACTTACCTAAGCTAAGCTCTACCAGTCTACC AGGTATAGTATGCTTGTGAGAACAAATGGTTTATTTTGAAGAACAGCAGA GATAGAGAGTTCTTCCTCCAACCTCCAACGAGTGGTTTACGCATGTACGT ACCAAGAGTAGTACAATTTCATTTCATACTGCTGTTATACCGGTATACGA GTATCAGTTGTCAGATAGCAAGACGAATCACATCTCACCACACCCCAGCA GAATTTTCCCGTAGAATGATGGAAAGCGCTTCTCGATTTGATTTCTACCG CCCGCCACCCGACCCCGATCGGCACCGCACCCAGTAGTGGACAAACACTG TTAGTGGATCTTCCTAAGGTAGCTAATTAGGCACTCTGATTGGCCAAGCA AGCACTGACCACTGGCATAGGGTTAGGGTTAGGGTTAGGGTTCGATCTGA GGGTCAACATACTACTACCAAGACAAAACCCCCATTTTAAAGATCCACTA TCACCCTTTGTCCACCCCTCCACCGCACCACCGCCCCGGCCGCCCCACGC GTCGGCCCTCGGCGACCCCGGCGAGTATCAGTTGTCAGATAGCAAGATGA ATCACATCTCACCACACCCCAGCAGAATTTTCCCGTAGAATGATGGAAAG CGCTTCTCGATTTGGTTTTTGTCTGCGGAGCAGAAACAAGCAGCCCGTGC TGCCGTACATTTATTGCGCCTGCGGCGAAATACGTTGCGATGTCCCGATG TCCCAGATTCCAGGGCGTTCCTCGGGATTAGCCAAGAATCAACCGTTACA AAGTTTCCAGATACATTTCCCGTGGCCATACCGCGACTACGTATGGGCGG ACCCTAGCCCATGGTACCGCGGCTTCTATATACGACTCTTTTTTTTTTCT TTTTTTTTCTCTTTCATGCACGAAGACCGTAAAAATACGCCGTGTTCAGT TTTATACCGCGCGAAATGCGACTTCGGATATGTCGATAGGTTTTTATCTG AAAAGAGTCCAAGTATATGACCATATAGAGTTGTATATGTGTCTAAAGAT TGCTAGCCTATTAATAGATTGCTAGCAGGGTAGGTCTTGCCTGTCGTATA TATTTAAAAAATAAAAAAACAACAGCTGTGAGCTTGAGGAGTTCGTCGAA GCTCATCTTTGCTAGCTGAGTGTAATACTTCGATCGCGCGTACTTACGTA TTATCCAGGAACGAGTTGGGGAACGTTCTTGAAGGGTCCCCTAACCCGGC CCAAAGATAAAGCCTCATTATGGGACAGCAAAAGCAAGCCCTCGGGCTCA GTGTCAACCAAGGCTTTCTTCTCCAAATAGAGGTCGAGAAGAAGAGGTTA TTTGAGACGCTCAACAGTAGCCTTCGCCCCTGCACCACCGCGCGGCACAG GGCTTCACCCACCGTACTTCCCGTCTTTAGTACTTCCAACCCCAACTCCC ACTCCACAACATTCTCCCGACCAGCCTTTCTCAACCATGGATTTTTCAGC AGCTTCAACATTCGCGAGCCTTGACGCTTACACTACGGCCACCACCACGA CAGAGGACGGCGTGCCCGTCCCCATCCTAGAGCGCTTCGTCCTGGCTCGT GGGGAACGAGACACGCGGACCAGCTCAGCTCAAACCCGGTCCTGCTGACC TGCGCCGACGTGATAGAGGCGGGGTCGTCGGAGGAGCGTCCGGATCTCTT CCGCCTCGTGGTTGCGGCGCGAGGGACCCCAGCAGCAGGCGCGGCCGCCA ATCCCCACGAAGGCAGGAACGCAAAACGAGTCATGTTGCAGGCAACCGGG GAGTACCTCTGGAAGTGCGACGACAACGGAGGGCTGCGTACTCTCGACGA CCGCGCCATCTTCTCTTCCCAGATGGCGCGGTCGTCGAGAGTACGCAGCC CTCCGTTGTCGTCGCACTTCCAGAGGTACTCCCCGGTTGCCTGCAACAGG ACTCGTTTTGCGTTCCTGCCTTCGTGGGGATTGGCGGCCGCGCCTGCTGC TGGGGTCCCTCGCGCCGCAACCACGAGGCGGAAGAGATCCGGACGCTCCT CCGACGACCCCGCCTCTATCACGTCGGCGCAGGTCAGCAGGACCTGGTTG GGTACGCCATGGTCCCAGGGGTGACAGAGGAGCAGTACAGGTTGATCAAC GAGTTTCCAAGTGAACAAAGCAGGTCATGGGGGGCGTTCGGAAATGAACC AATGATGTACTATAAAGACTTACAGGAAGAGCAACCAAGAGAGAGGAGTG TGGGAAAGCAGCCCCGATCGGTGTAACGACAATCCACAAGCAACGGAGAA TCGTAATACTGATAGAGACTGTAAAGTAAGGGAGGGGTGGTAGCACCGGC CACGGGAGGTGCTTCCACCATTCTTATCCCACACTATATGAGAGAAGAAC TGCCCAAGATACATGCGTATTATCCAGGAACGAGTTGGGGAACGTTCTTG AAGGGTCCCCTAACCCGGCCCAAAGATAAAGCCTCATTATGGGACAGCAA AAGCAAGCCCTCGGGCTCAGTGTCAACCAAGGCTTTCTTCTCCAAATAGA GGTCGAGAAGAAGAGGTTATTTGAGACACCACCCGCCCACCCCTCAAATA GATAAAACACGATACTTGGGACACCAGGTATTCCCAGACCTGGCCTCTAA GTTTTTCTTCTTTAAAAACCGCCGGTAGAAAAAAGATCCGAGTGTTCGGG TTTCTATATTTCGAAAATTACTAGAAAACTCAAAACACTCGGAGGCTATT TTCGCCGACGGGGTGGTAGCACCGACCCTTCGGTAGGTGCTTCCACCATT CTTATCCCACACTATATGAGAAGAACTGGCCCAAGAATACATGCGGATTT TATATGTCCTCATGTAGGGTGTACATCCCGTATGAGGGACACAATCTGAG GCTGTAGAATTCAGGAAGTGTGCGTCTATTTGTGGGGGGAGAAATAATTA AAATACATTAAAATTAAAATTAAACAGTCTGAAATAAACATACCAGGTAT ACTATAGTGTTCCGACGAGTTGACGTGATAGAGTGGGTCTACTATATATA TATATATATATATATATGGCATTGCATTTTCTGCTCTGCTTACTGCACTG CAGCGTAGTATCTCTGTGTCGTAGTTTTGTGACCACAGAACTGGTACCTC TCTAGGATGAAGAATCGGCACGGACACTGAGTGTGCTGGATGTCGACGGG TAGAAAGGAAGGTTCAATGTGATGAACACACACATATACTTCGTACAATA AAAAAACACCCCGATTCGATTCGCCGTGATTTTGCCCTATATATGGGCTA ATATGACATGGCCGTCCAAAATACGTGGGCTATGACCCTCTATTTAATAG AAAAAAAAAACTTTCTTTGGAGGGTCATATATATAGCCCAAACTTAAAGA TGTCGGGAGCTTAAAGATGTCGGGAGACATGTCAATGTCAAGCTGTCTGT CTGTCAAGGCTGTCTGTCGTGTTGTTTCGTTCTCGTACCCGGTACGTTAG CATCGCACTTGCTTTACCCATTTATTTGCGTTTATTTTGTTTTGTTTTTT CTCTGTTTCACAGTCTGTGACCACAGAATTTGTATCTCTCTAGGATTAGG AATCAGGACAGACACTGGGTGTACTGATGTGGTTGAGTAGAAAGAACGGG TTTTAATGTGAAGACAACACACACACATGGAGAACCATCTCATGTAACTG CTGTATTGATTTTGAGATTGTATTGACTTCGACATAAATGTTGATATCCC TCATCCCTCATTGACATTGATTTCAATATTGATATATTGACACTGATATT GGTATTGACGTTGATACTGGTATTTCAATTGATATTGATATTTTATAGGA CTATTACCAGATCGTCCGGTAACATGCCGGCCTAACCCCAAACCTGACCA CACTATTAGTGACCTGTAAAATTCCCAGAAATATCCTACTGGACGAAATG CGAATACTACTGATAGTGTGATACTGGTATTGAAATTATTAATAGTATTG ATATTGATATTTATCTTGATAATGGTTTTGACCTTGATTCTGATGCCGTA TTGATGATACTTACTGTAAGCACTTACTGATAAAGTGGGTACCCCGGATT AAGAGCACCCCGTGACAAAGCGTAAACACGCAGTCTTGAAAACCTACTGT ATGTTTTGCTCTTGGGAAATGTGTAGCTATTGGTATTCCGAAATATACCA GGTAGTTGGTGGAACAAGCCGTTTTGACCGCTCTTAACTCCAGAATGCTC TTGTCCTGGGCGTCACTCTGGGTACCCACTACCGCTGTATTGATATTTGA TCATACTAACTTATTATAGCTAGGATGTAGACCGATTTTGTAAAGGCTTT TACCTAGGATGTAGTGTTGACGGTATGGATGTTTTCTCATACGCTTCGTA GGCCATTCGGGCGAAGAGTCCAATTTCTAAACCCTAATGCACCTGGTATT AATATGACACTTGCAATCCCAACGTATTTCACGGCCTCCTTCAGGTATTG CGGGACTTTACGGCCTCGCCGGTACCGACAACTCCTCGGGGGACCACGTG AAAAAGCTCGACATCCTGTCCAATGAAATCATGATTTCCGCTCTCACGGT GAGAAAAACCACCACCACGCTACGTATGATACCAGGATATTGCAGCGCAA CAAGGATATACTGTTTTTTTTCACGGGTCGTGTCAGGCCGGGTCGGGAGG GGTGTTCGAACGTCCATGGGTCGTCGTCGGGCCGGGTCGGGAGGGGTGTT CAAACACTCTCGGGTCGGGAGGGGTGTTTCAAACGTTCATGTGTCGTTTC GGGCCAGGTCGGGAGGGTTGTTTCAAACGCTCACGGGTCGCATCGGGCCG GGTCGGTCGGGACGGGTGTTTCCGACGCTCGCGAGTCGTATCGGGCCGGG TCGGGAGGAGTGTTTCAAACGTTCACGGATCGCACCGGGCCGGGTCGGGA GGGGTGTTTCAAACGCTCATGTGTCGTTTCGGGCCGAGTCGGGAAAGGTG TTCAGACGCTCGCGGGTCGTGTCGGGCCGGGTCGGGAGGGGTATTCAAAC GCTCACGGGTCGTGTCGGGCCGAGTTGGGAGGGGTGTTCGAGCGCTCATG GATCGGGTAGGCTTTCCAAAATATCTCGGGTCAAAATGTCGAGATCTTAC ACGTACGTATTATGTTTTTGTTTTTGTCGCGAGAGGCATGCTACGATATG GGTCGGGGTGGGTGTACTCATGGGGGTGCCTAATCCATGTCGATTTACTC ACGGGAGAAACTCTTAACCCCTCACCGAAAAAAACGACTTTTAGAAAAAA ATTACTACCAGGTACCAGGTAGTAACCTCAAACCTCAAAAACATCCGGAG GGATTTGCATACAGTACAGGACACCTGATAAGGAACAGAAAATCTGGTCC AGGCTGGATTTTTTATTTTGCGAGAGGCTGCTTTCCCCACTAATTTCAAG ATAACGACTCCCGACTTTCTTATTTTCCTCCTAAATCTCAGCCTGGCTTT CTTATTCTAGCCTGTTTCTTATTAGGTGTCCTGTACTGTATAGGCCTACG TATTGTGGGACGGTAGTCCCGTAGCAGGTTAGCTCCTTCTTCGGGTTTGG TATAGAGACACACCGAGGTGGGATGTGTAGCGTTATCACACTCTCGGGGG TCAACAGCACGAGGTAATCTCAGGGTGCCCCACGAGGAGCCAGGATGGCC TTGAAGGGTTATAGTGTTAATGAGGCGGTAGGGTCTATCACTATAATAGT ATAGGTGTACCACTTTGTCCGAAAATGTAAGGAGTGTTTGAGTGTTGATA TTCATATAAAACGGTCGTTACGGTTTCGGACACGGGGGTGTAAGACCAAT GGGATTGCAAAGATAGTCAGAGCAAGACGAATGGGATTGCAAAGATAATT GGAGCATGATCAATGGGGCTGCAAATATATTTGAAGCCAAGGCCAATAGG ATTACAAAGATAATTAAAGCAATACGAACGGGGTTGCAGATACAATTGGA GCAAGACGAATGGAGTTGCAACGATGATTGGAGCAACATCAATGGGACGG CTCATACATTTGGAGCCAAACCCAATAGGATTGCAAAGATAATTGGAGCA ATACGAACGGGATTGCAACGACAACTGGAGCATGACAGGTGGGGTTGCAA AGATAATTGGAGCGGCACAAGTGGGATTGCAAAGGTAATTGGAGCAAGAC GAATGGGATTGCAAAGGATTGCAAATAAAATTGGGGCCCCGTTGGTCAGA AACAAAAACGGACCCGAAAGAACCCCCTCTACCCTCCTACCGACTCTGTC TCGAAATATAAGGACCGTCGTAATTTAATATTTATATACAAACGGCCCTT ATATTTCTGGACAAAGTGGTATAAAGGAAACGTACCCACTCTCGTGACCG GTTCTTGCTCTTCTCTTGTTTTGTTTTTTCGTGCGCAGGAATCGCACATG TGCGCGGTGCTTGTGTCCGAGGAGAACGAGGAGCCAATCATCATCGAGAA CAAGAAGTCAGGTGATTGGTGATTGGAGGACACACATCGATCAGATCAGA TCAGATCAGACCAGATCAGATCAGATCAGACCAGATCAGATCAGATGAAA TAGATCCCCCTACGATAGAGGTACTGCTGTACCTTGTTTTGGCATAAACG TGCTGTACTGTACCTTTTTTTGGCCGAAACGGTTTCGGAATGACGGGGCA CTCTGTTATTCTCCTATTATACCGTGGTTTAGGCACAATTTGACGAGAGT CGACGAGGGAAGAAAGTGCTATCATCTTCTCGCGATAAAAATGCAAGGCA CGTACATACATACCGTAGTGGGGAGGGAGGAGGAGAGCCTACGTAGTGAC CCCGGATCTGAGTTACGACTAATTGAAAAGAGGGAGAGATAAAAGAAGAG TGAAGATCGTAAATGGGATGGAAAACAAAAAAAATGTGTAGTGGAACGTT GTCCCGCGTTGATGCACTGCAAATCGACGGAAGTTCAATATTGTGATGGC AATATTTTTCGTTTTATACTTGAGGCCGTGGGGTAGCGCTATTATTTCCC TCCAAAAATCAGTTTTGGGGTGAGAGGTATAGAGCTCCTATACTATAATC AAGACACTCAAGCCACCACCCTCAGAAGGCAAAAATGGTGCACCTTCTCT ACCGTACTTTACTACTACTGGTAGTAGCGTACGTCTTTCATGATGTAGAT CTTTTGGGGCAGATATTTTATAGGTCGAAGCAGATAGATAGGTCTGTCAG GTGAGGACACTGATGCCAACATATATCGGACAGATCTGATCCCATTCGTA TCGTGATCTGGATCTTCTGGGGCAGATATATACTACTACTGTAGACCCCT GATGGATATTTCAGGGCAGATAGATGGATAGATCCCTGATGTCTCCTCTT TTTGATACGCTGCTTGTTCTGCTGCTGCTGCTGCTGCTGTTGCTGCTACT GCTGCTTGTTCTGTTGCTGCTGCTCTCTGCTGCTGCTGCTCTCTGCTTCT TGCTGCTGCTGTTGCTGCTGCTCTCTGCTGCTGCTGCTATCTGCTTCTTG CTGTTGCTGCTGTTCTCTGCTTCTTGCTGTTGCTGCTGCTCTCTCTGCTG CTCGCTGTTGCTGCTGCTCTCTGCTTCTTGCTGTTGCTGCTGCTCTCTGC TTCTCGCTGCTGCTCTCTGCTTCTTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTCTCTGCTTGTTACTGTCGCTGCTC TGCTTTTGTCTCAGGCAAGTACTGCGTGGCTTTCGACCCCCTGGACGGGT CCTCGAACATCGACTGCAACGTCTCCACCGGCACCATCTTCGCCGTGTAC GACAAAATTTCTGCGGTGGGAGGTAACATCGGCGATGTCCTGCGCAAGGG CACCGACATCAAGGTTAGACTAGGCTCGTCTTCGTCTGGCTTGGGTTGGG TTTGGGTTAACCCCTCAAGAACTGGTCCCACGAATTTGGGGACAAACTAC TTGGAATTAGTGTGGGATTTTTTTTTTCAGTTCTGTATGGGTTAAATATC GGATTGGTTTTTGGTTGCTGTGGCTTGGCTAGGGCCGTTTTGGCTCGGCT AGGGTCGTTTTGGCTTTTGGCTAGGGATGTTTTTTTTACTGGGGCTGTTT TTACTTGTTTTGTTGTCTTGTCATCGTGGCAAATATTCCAGTGCTGCACA ACGTGGCATTTGTAAATAGGCGCGATTTTGTCACGTTCTCGTTTTTAGTT TTGTCACGTTTTTTTGTTGTCGCGGTTCGTGAAAAATGGCAGTATTACTA TTCGCGAAAACACTGGTCACGTTTTCTAAAGAAAATACGTTTTTCGTGGT GTGTGTGTGTGTGTGTGTGTTTTTTTTTTGTGTTGGTTAGAAAACAAAAC CCTTTTGCACTTTTTTTTTCCTCCGCATTCAAAGGTGGCCGGATACTGCA TGTACGGGTCGGCGACGGAGCTGGTGATGACTTTCTACGGCTCCGGCGTG CACCGCTTCACCCTGGACCCTTCGCTGGGAGAGTTCATCCACATCGAGGC CAACGTTCGAATCCCCGCCCAGCCGAAGGTGAGGTTTTCCCCTCCCCCGC TCCGTCTCGAAAGGGATGCGTGGTCAATGGTCAAATGACTAAGGCAAGCA ACAAATGAGTACCCCCCCCCCCCCCCCCCCCGCATAAATATATTACCAGG TATATATTTATAGGTTGGGTTGACGTCGGCTGGCGACGACGCTGTAAATC ACGCCTCTCACTGCGTGAGCTCGACAACCAGGGTACCGTTTTTTTTTTGT TTGGCGATCACCAAGACTGGCGGTCTTGTTAAATCCTTTGTGCGGGGTTG AGAACCTCAACTCCGCACAAGGGGAATGATCGTATCACGTAGTGTGTATA TGGTAAGGCACCCACGAGGCAGATGCATAGTAATAACCATAGCTGTCTCT GAAAGTGGCCACACCAGAAATTAAATAAATTCATTGGAGGCTGTCGTCCA TATGCAAGTCCGCCTCAGAGGCGGTTCTTAGCAGGATGCAGCTCACCCTC CATGCGACACGCCCAATACCTCACGGCGCTTCGCGCTTGGTGCAAGCAAT GTCTGCCTGGTTGGTGAAAACCCAACGTGCTCCGTCACGGCATTGTAGGG ATGCGAGGGTCTATGGTCATACGACTACGGCCATGCACGATATGAGTACA CCCCTCCCCCCCCCCCCTCCCCCGTACCGCCTCCCCCTTGAATTGGCCAC GTGCGCTTCACAAGAACTCCACCCCAAGCGACACGCGTGTTGTACCAGAC ATACTTTTAGAAATTGCTACCCCCCCCCCCCCTATAAATAGATATATATA CGTTGATTGAGGTTCGCTGTGGTGCTCTTGGGCCTCTTGGGCTTTCACTT GGCTTCAGACCGGACTCGCACTCGGGACCAGTTTCGACGTCCTCGCCTTC GCTTTCTCGCCCGCTCTTCTCGAGGATCGCGTCCCCCAGCCTCCGCCCCT CACTTTCCGCCCGCGTGCGCTCTCGGGTCAAGCGCCGTCGCTGAGCGCAG CGACCTTGAAGTGGGTGGATCTTGCGGAGATGCCTCGGCTCTACTGGCCG CTGAGGATGATATGCGTGGTGCTGTTGCTGCTGAGAGAGATATTTGCGGT GCTGTCTCCACTCAAACTCAAAAGATCCACGGAGGAATGAAAACTCGGCT GATTTTTTTTTCGGGTGGATTCATGTACAATGAGCAACTTTTTCAGGGTA GAAATATTACTTCTGTGCTACAGCAGTATATACTCGTACAAGAACAAACA CAGTACATACGAGTAGTACCAGGTACAAGTAGTACGTACTGTATGTACGA CGTAGCGAGCAGCTGGTATGTACAGTACTGCTGATTGCTGCTGTGTAGTA CGTACTGCTGTACAGCAGTACTACTACTGCTGTTGTATAGTGTACAGTGC TGTAGATACGAGTCTGCTCAGACACACGAGAGTCAGAGAAGAATTGAGAT CCCCCCCCCGTTGCCAGCTTTTAAATCTCGACTTTGCATATCCACGCGGA ACCGCTTGCTCGGCACGGAGTGTTTTTGGCGCACGCACCCAAACTGAAAC TGAGCCCGCCACCTCGACTGGTGCATTTCTGACAGAGACTGAGAAATGAA GTTGCGAACTGAGTATCAGCACTTACAGTAGTGTTTCCTTCTTGCTGTAA CACCTGACATTGCCTTGATTCTGCACGTAGTATGTGTCAGATGTCAAAAC ACGAGCGAGCGCCATCAGATTGTTGTCGTAAATCTCACAAACTATCCTGA GGACTGAGACTATCCAGGGAACACCGAAAGCGGCTGAATACATTTCTGAG ACTGACTGTTGAGACTAAGAAATTAAGTTGCTAACAGAATATTTCAGCAC GCAGCATTCCCTTCTTCCTGCAACCCTTGGCATTGCCTTGATTCTGCACG TAGGCGTCAGATATCGAAACACGAGCGAGCGCCATCACATTGTCGTAAAC AATAAGGATTGTACCAAATAACTGATGTACCAGGTATATGTCCTATCCGA AGCATGGGTGCCGGCGAATGCCGGCACCCATGCGGAGCCCTTGTATATGA TATATTTATAGGTTGGGTTGGCGTCGGTTGGCAACGACGCTGTAAAACAC GCCACTCGCTGCGTGAGCTAGACAACCAGGGTGCCGTTTTTTTTTTTTTT TTTTTTTTTTGGCGGTCACCGAAACTGGCGGTCGAGTAGATCATTTGTGC GGGGTGGAGAACCTTTGCTCCGCACAAGGGGAATGGTCGTATCACGTAGT GTTAATATGGTAAGGCATCCGCGAGGCAGTTACATAGTAAAACCCATTGC TGTCTCCGGAAGTGGCCACACCAGAAATTAAATTAACTCATTGAAGCTGT CGTCCATATGCAAGTCCGCCTCAGAGGCGGTTCTTAGCAGGATGCAGCTC ACCCTCCATGCGACTCGCCCAATACCTCACGGCGCTTCGCGCTTGGTGCA AGCAATGTCTGCCTGGTTGGTGAAAACCCAACGTGCTCCGTCCCGGCATT GTAGGGATGCGAGGGTCTATGGTCATATGACTACGGCCGTGCACGACATG AGTCACACCCCCCCCCCCCCCCCCCCCACCCCTCACTACCCCTACCCCCC CCCCCCCCCCCCCCCCTTGCCTTGCCCCGCATGCAGCGTTCTAAGTCCCC ATACCAGGACGATCTACCCATACCCACACAACCACCCCCAGCCCCCTTTG CCCGTCCACGTACGATACAAAACCCTACCCCAGACTATCTACTCGTGTAA CGAGGTGTAACTCCGACAACTGGGACCCCCCCCCCCCCGTTTGCCTCCCA CGCAACGTACAAACCCCCAAACCAGACCCAAACCAGACCATCTACTCATG TAACGAGGGTGACTTCGACAGCTGGGACGCCCCCCCCCCCCAAGCTCCCC CCCCGTTGGAAAGGGATGTGTTAGAGGAGATGAGAAAAATAGACGAATGT GACATGGAGAAGTTTGGTACACTAAATAGTAGCGAGAAAACGATCGCTAT CTAAAGAGATAGATGGTGGCCACAGGCGGCGAAGCAGGAAGGGGGTAAGA TTAGCAAAAAGTTTATTTGTAATATATGGAAACAACGTAATGAGCGCCCA AGTGTTGGAGGTGTCTCTATTAGGAGTAGGAACGGTGCTCCGTCTAGAAA GGGATGCGTGGTCAATGGTCAAATGACCAAGGCAAGCAACAAATGAGTAC GCCCCCCCCCCCCCCCCGCCCGTTTGCCTCCCACGCGACGTACAAACCTC CAAACCAGACCATCTACTCGTGTAACGAGGGTAACTTCGACAGCTGGGAC GAGGAGATCAAGCGGGCGGTGATGGGCTTCAAGTCGGAGTCGCCTCCGTG GGCCCAACGCTACGTTGGTTCCATGGTTTCGGACGTTCACCGCACGTTGC TGTACGGTGGGCTGTTTCTCTACCCTGCCGACAAGAAATCCACCAAGGGT GAGTGAGACTACACTACAGTATGCTACAAGGAAGAGCCCCGCCAGTCAGT CACAAACCCTTGTTTTGCCGAAATGTAGTACAAACAGCAGTAGCGGGGTA TCCACTTTTAACCCCCTAAGAACTGGTCCCCCGTTTTTGGGGACAAACTA CTTGGAATTAGTGTGGAATAAGTTTTTCAGTTCTGAATGGGTTTAGACCG TCGTCCGTTGTAAGGCTTTTCGGGGGGGGACGTAAGACCAGGAAAAAAAT CGGCTTGCTCACGAGAATAACAAAGAAAAAACTACCTGGAATTAGTGTAG TCAAGTAATAAAAGATAAAAACCATGTTATAACCCGTTTAGGCATGCGGC TTATTAGGACTGCAGTCCCGTGGTGGGGACACAACACTTGGAATTAGAGT CAGACTTACTCGAGGTGTCTTAAAAGAGATAAGACCACGTGTAGTACTAA GTGGGTCAAGAGATAAGACCACGTGTAGTACTAAGTGGGTCAAGAGATAC GACCACGTGTATTGGCTTGTCACGGGTTGGTCTTAAAATGGGTACCCCAC TGCTCTTAAAATGGGTACCCCTACCGCGGTATGCCTCAAGGGGGGGGGGG GGGGTGTTGTTGGTGATTGCTGCTGTTATCGCTGGGTGCATAATTTGATA ATTTTGGACCGGACTTTTCTATTTCTGCGAAACGTTCCTCTACCCTAGTA GAGAGTTGGGCACGGATACCACGGATACCACGGATAGCCTTGGGAGGGGG GGGGGGGGGGTGTACTCATGTCGTGCATGGCCGTAGTCGTATGACCATAG ACCCTCGCATCCCTGGGGCTTACTAATTTGTCGGTTGGCTTAGTCATTTG ACCGTTGACCACGCACCCCTTCCGAGACGGGAGGCGAAAGAAGGGAGGAA GGAAATCGTTATTTTATTATACGAGCTCGGTTTTATTTTGTATTTCAGAT GTGATTATTTGACTCGTTCCATTTTTCACGTCCCCTCATGTGTACAAGTC TTTTCTGATTTTTTTCGCAAGAACTCCCAACGTACTCTTTGGTCATATTT TCAACTGACAATAAAACGTCGTCTCTTTTATGTTTCGTTTGAAACCAACC CTGTGGTGAACAACAACAAAAACAGGCAAGCTCCGCGTGCTTTACGAGGG GTTCCCGATGGCGCTCATCATCGAGCAGGCGGGAGGGACCGCGTCAACGG GAATGTTCAACGGATCTATCGGCCGCGTGCTCGAAATCATGCCGAAGGAC ATCCACGAGCGCTGTCCGATCGTCATCGGAAACCCCCCCTTCGTCGACAG GCTGCTAGCCGAGTACAAGCAGGCGTAAGAGAGTAGGGTATATACTCTGG GGTACCCGGGTACCAGACCTAGGTAGGGTATATACTCTGGGGTACCCGGG TACCGAACCAGGTAGGATATATACTCTGGGGTACCCGGGTACCAAACCAG GTAGGGTATATACGCTGGGGTACCCGGGCATCAAACCTGGGTAGGGTATA TACTCCGGGATACCCGGGTAACCAACCTAGGTAGGGTGTATACTCTGGGG TACCCGGGCATCAAACCTAGGTAGGGTACACACTCTGGGATACCCGGGTA GGGTACATACTCTGGGGTAAACGGGTACCAAACCTAGGTATGGTATATAC TTTGGGGTACCCGGGCATCAATAGATACCCGGGTACCAAAGCTGGTTATG CTGACCATACCCGGGTAGGGGTAGATGCGTTGGTCATACCCGGCTATACA CCCTACTAAACACGCCCTTAGGGGGTTTCCATGTCATAATGGTGGAAGGT TTTTATTTGCGTCGACCGGGTGCTATGTAGCCGAGTACAAGAAGAGGCTG GGAAGGGTCCGGGTGCTATGTAGCCGAGTACAAGAAGAGGCTGGGAAGGG
back to top

Coding sequence (CDS) from alignment at S-latissima_F_contig102:540247..555146-

>mRNA_S-latissima_F_contig102.191.1 ID=mRNA_S-latissima_F_contig102.191.1|Name=mRNA_S-latissima_F_contig102.191.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=2046bp|location=Sequence derived from alignment at S-latissima_F_contig102:540247..555146- (Saccharina latissima SLPER63f female)
ATGGCTTCGAGACCCCAAGACCCGGACCAGGTGGACAAGACGTCCACCCC
CACCCTGTCGGCGTTTGTGATGAGGAGCACCGGAGACCACGAGCTGGCCA
TCCTCATGAACGCGATTTCGATCTCTTGCAAGGCCATCACGCGCGCTGTG
CGCAAAGCCGATGGCTTCGAGACCCCAAGACCCGGACCAGGTGGACAAGA
CGTCCACCCCCACCCTGTCGGCGTTTGTGATGAGGAGCACCGGAGACCAC
GAGCTGGCCATCCTCATGAACGCGATTTCGATCTCTTGCAAGGCCATCAC
GCGCGCTGTGCGCAAAGCCGGTATTGCGGGACTTTACGGCCTCGCCGGTA
CCGACAACTCCTCGGGGGACCACGTGAAAAAGCTCGACATCCTGTCCAAT
GAAATCATGATTTCCGCTCTCACGGTATTGCGGGACTTTACGGCCTCGCC
GGTACCGACAACTCCTCGGGGGACCACGTGAAAAAGCTCGACATCCTGTC
CAATGAAATCATGATTTCCGCTCTCACGGAATCGCACATGTGCGCGGTGC
TTGTGTCCGAGGAGAACGAGGAGCCAATCATCATCGAGAACAAGAAGTCA
GGAATCGCACATGTGCGCGGTGCTTGTGTCCGAGGAGAACGAGGAGCCAA
TCATCATCGAGAACAAGAAGTCAGGCAAGTACTGCGTGGCTTTCGACCCC
CTGGACGGGTCCTCGAACATCGACTGCAACGTCTCCACCGGCACCATCTT
CGCCGTGTACGACAAAATTTCTGCGGTGGGAGGTAACATCGGCGATGTCC
TGCGCAAGGGCACCGACATCAAGGCAAGTACTGCGTGGCTTTCGACCCCC
TGGACGGGTCCTCGAACATCGACTGCAACGTCTCCACCGGCACCATCTTC
GCCGTGTACGACAAAATTTCTGCGGTGGGAGGTAACATCGGCGATGTCCT
GCGCAAGGGCACCGACATCAAGGTGGCCGGATACTGCATGTACGGGTCGG
CGACGGAGCTGGTGATGACTTTCTACGGCTCCGGCGTGCACCGCTTCACC
CTGGACCCTTCGCTGGGAGAGTTCATCCACATCGAGGCCAACGTTCGAAT
CCCCGCCCAGCCGAAGGTGGCCGGATACTGCATGTACGGGTCGGCGACGG
AGCTGGTGATGACTTTCTACGGCTCCGGCGTGCACCGCTTCACCCTGGAC
CCTTCGCTGGGAGAGTTCATCCACATCGAGGCCAACGTTCGAATCCCCGC
CCAGCCGAAGACCATCTACTCGTGTAACGAGGGTAACTTCGACAGCTGGG
ACGAGGAGATCAAGCGGGCGGTGATGGGCTTCAAGTCGGAGTCGCCTCCG
TGGGCCCAACGCTACGTTGGTTCCATGGTTTCGGACGTTCACCGCACGTT
GCTGTACGGTGGGCTGTTTCTCTACCCTGCCGACAAGAAATCCACCAAGG
ACCATCTACTCGTGTAACGAGGGTAACTTCGACAGCTGGGACGAGGAGAT
CAAGCGGGCGGTGATGGGCTTCAAGTCGGAGTCGCCTCCGTGGGCCCAAC
GCTACGTTGGTTCCATGGTTTCGGACGTTCACCGCACGTTGCTGTACGGT
GGGCTGTTTCTCTACCCTGCCGACAAGAAATCCACCAAGGGCAAGCTCCG
CGTGCTTTACGAGGGGTTCCCGATGGCGCTCATCATCGAGCAGGCGGGAG
GGACCGCGTCAACGGGAATGTTCAACGGATCTATCGGCCGCGTGCTCGAA
ATCATGCCGAAGGACATCCACGAGCGCTGTCCGATCGTCATCGGAAACCC
CCCCTTCGTCGACAGGCTGCTAGCCGAGTACAAGCAGGCGTAAGCAAGCT
CCGCGTGCTTTACGAGGGGTTCCCGATGGCGCTCATCATCGAGCAGGCGG
GAGGGACCGCGTCAACGGGAATGTTCAACGGATCTATCGGCCGCGTGCTC
GAAATCATGCCGAAGGACATCCACGAGCGCTGTCCGATCGTCATCGGAAA
CCCCCCCTTCGTCGACAGGCTGCTAGCCGAGTACAAGCAGGCGTAA
back to top