mRNA_S-latissima_F_contig1014.148.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1014.148.1
Unique NamemRNA_S-latissima_F_contig1014.148.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A6H5JAC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC0_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 1.500e-71
Identity = 142/239 (59.41%), Postives = 164/239 (68.62%), Query Frame = 1 
Query:  772 VNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFL----------------------------------DGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSLV 1386
            V P+ + ++LL+KRGR     VSS EAGY   PT KQ++DY ++P +S L R GDM+GL+ AV AGR MDA NKFGES+VHVACRRGN+ +L FL+ NGGSLT CDDLGRFPLHEVCWA +PRFDIVR+FL                                  DG +    XXXXXXXXXXXXXXXX    +   LN LLVTDKRGC+PLRYVKEESWP WRQFLDEVVDE+WPSLV
Sbjct:  136 VPPDAHLIALLKKRGRTPKAIVSSAEAGYSVPPTAKQIMDYDAQPHLSGLARTGDMEGLQRAVNAGRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHEVCWAAQPRFDIVRVFLEHERETNXXXXXXXXXXXXXXXATTVSGAXXXXSDGESTXXXXXXXXXXXXXXXXXXXNIVVD---LNMLLVTDKRGCSPLRYVKEESWPAWRQFLDEVVDEFWPSLV 371
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: D8LCH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH5_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.710e-45
Identity = 83/167 (49.70%), Postives = 96/167 (57.49%), Query Frame = 1 
Query:  886 LDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSLV 1386
            +DY ++P +S L R+GDM+GL+ AV  GR MDA NKFGES+VHVACRRGN+ +L FL+ NGGSLT CDDLGRFPLHE                                                         RGC+PLRYVKEESWP WRQFLDEVVDE+WPSLV
Sbjct:    1 MDYDAQPHLSGLARRGDMEGLQRAVDTGRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHE---------------------------------------------------------RGCSPLRYVKEESWPAWRQFLDEVVDEFWPSLV 110
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: W7TFS2_9STRA (Ankyrin repeat-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFS2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.890e-38
Identity = 82/207 (39.61%), Postives = 115/207 (55.56%), Query Frame = 1 
Query:  763 DSKVNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSL 1383
            +++ +P+ +   +L++RG   +  ++  +A + + PT KQV DY   P ++  VR GD+  LR+   AGR MDA N+FGES+VH++CRRG  + LRFLLENGG +  CDDLGR PLH+ CWA  P FD V   +D                            D  L  + V D RG TPL Y++ E WP WR+F D   ++YW  L
Sbjct:  182 NNEASPQDFLWGILQERGYETSPLLAKTQA-FFRPPTAKQVTDYDI-PLVT-AVRTGDLGSLRDMAAAGRQMDACNRFGESIVHISCRRGQAETLRFLLENGGRVHMCDDLGRTPLHDACWAKVPVFDCVSAIMD---------------------------QDPSL--IRVVDCRGATPLSYIRREHWPEWREFFDSKKEKYWAPL 356
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A835ZH90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH90_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.350e-35
Identity = 82/204 (40.20%), Postives = 106/204 (51.96%), Query Frame = 1 
Query:  772 VNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGG--SLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWP 1377
            VNP  + ++ L  RG   T+ V + E+ Y  +PT KQV DY     + + VR GD+D LRE   AG  M+A NKF ES+VH+A R G  +V+ F++E  G  SL   DD GR PLH+ CW   P FD+V   LD                               +  LLV DKRG TPL YVK+E W  W  F+D + D+YWP
Sbjct:    2 VNPHEFLIATLAARGYP-TRTVVALESRYATKPTAKQVEDYSID--LVNAVRAGDLDTLREMHAAGCSMNACNKFAESVVHMAARIGAREVMEFMIECTGVESLAISDDYGRTPLHDACWTSEPFFDMVTFILD-----------------------------HEVEMLLVKDKRGFTPLLYVKKELWGAWHTFIDAIKDKYWP 173
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A835ZG28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG28_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.380e-34
Identity = 73/164 (44.51%), Postives = 88/164 (53.66%), Query Frame = 1 
Query:  910 MSDLVRKGDMDGLREAVKA-GRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSLV*DET 1398
            M   VR G +  L   V+  GR + A NKFGESL H+ACR+G+ DV+  +L +GGSLT CDDLGR P H+ CW  RPR+DIV+L L+  A                               LL  D RG TPLRYVK  +W  WR FLD V D YWP+   D T
Sbjct:    1 MGTAVRNGSVQELLRLVEEEGRTLSACNKFGESLAHLACRKGSADVVATILRHGGSLTRCDDLGRVPAHDTCWESRPRWDIVQLHLEADAAL-----------------------------LLTRDARGWTPLRYVKRANWAAWRAFLDAVKDRYWPARGGDGT 135
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BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A6H5JNI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI0_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.600e-34
Identity = 87/221 (39.37%), Postives = 113/221 (51.13%), Query Frame = 1 
Query:  721 ELPRPAATAVRDDKDSKVNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSL 1383
            E+ RP+  +         +P+ Y  ++L +RG   T   S+ + G    PT KQ+ DYQ  P + + VR+ DM  L      G  M ASN+FGES+VH+A RRG+  VLRFLL +GGSL  CDD G+ PLH+  W   PRF++V + L+                            D GL  L  TD RG TPLRY K E W  W +FLD V D  WP L
Sbjct:   79 EIQRPSPPSPVASVKGVTSPQAYLEAILLERGYDSTPRSSASD-GCRCTPTQKQLDDYQV-PLV-EAVRRWDMGALEALAADGVDMGASNRFGESIVHLATRRGSTPVLRFLLSHGGSLRICDDYGKTPLHDAFWTAEPRFELVAMMLE---------------------------MDWGL--LRATDVRGATPLRYAKNEHWASWCEFLDRVKDHLWPHL 267
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A836CA41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA41_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.490e-31
Identity = 67/158 (42.41%), Postives = 85/158 (53.80%), Query Frame = 1 
Query:  916 DLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGG--SLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSL 1383
            + VR+ D+D LR     G GM+A NKF ESLVH+A R GN  V+ FL++  G   LT CDD GR PLH+ CWA  P FD+V   LD                           +D  +  L+V D+RG TPL YVK + W  W  F+D V D+YWP+L
Sbjct:   10 NAVRQADLDALRMLHAEGHGMNACNKFAESLVHMAGRSGNCAVMEFLIDCTGPEGLTICDDYGRTPLHDACWATEPCFDLVSFILD---------------------------HDSSM--LMVVDRRGYTPLSYVKRDQWGAWHAFIDAVKDKYWPTL 138
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A836C838_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C838_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.820e-29
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1 
Query:  925 RKGDMDGLRE-AVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWP 1377
            R G+   LR  A   GR + A NKFGESL H+ACR G++  L+ ++ENGGSLT CDDL R PLH   WA  P++D++R  LD                            D+ L  L+ TD RG TPLRY+K  +   WR FLD V D YWP
Sbjct:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDA---------------------------DDTL--LVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 123
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BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: B7G9J4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9J4_PHATC)

HSP 1 Score: 125 bits (315), Expect = 8.080e-28
Identity = 77/227 (33.92%), Postives = 114/227 (50.22%), Query Frame = 1 
Query:  727 PRPAATAVRDDKDSKVNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWPSLV*DETTNA 1407
            P   A AV ++K + ++P+ Y   ++  RG +  K  + Q A Y K PT  Q   Y    ++ DLV+K  ++ LR   K+G   +  N FGESL+H+ CRRG++D+L+ LLE G +L   DD GR PLH+ CWA +P F +V L L+   R                              L ++D RG  PL YV++E W  W  +L+     YWP L  +  T++
Sbjct:  145 PSTRAAAVIEEKQA-ISPQSYLDDMIAARGYSTEKFKTLQTAYYNK-PTALQQASYDV--YLIDLVKKNGVETLRNIFKSGVSPNPCNTFGESLLHMICRRGDVDLLKVLLECGTNLQVADDYGRTPLHDACWAAKPAFAVVDLILERDPRL-----------------------------LYMSDCRGALPLSYVRKEHWCEWVPYLEARKHTYWPVLTNNTDTDS 338
[Close]
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Match: A0A836C8T3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.320e-27
Identity = 70/202 (34.65%), Postives = 96/202 (47.52%), Query Frame = 1 
Query:  772 VNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPTTKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVACRRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGTARRRPXXXXXXXXXXXXXXXXXXXXNDEGLNPLLVTDKRGCTPLRYVKEESWPVWRQFLDEVVDEYWP 1377
            V+PE     +L++RG + T+   + E  + + P   QV  Y +   +   VR GD+  LR    AG  M A N+FGES++H A R G++DV+ FLLE+G     CDD GR  LH   W   PRFD+  L L+   R                              L   DKRG +PL+YV+ E WP+W +F       YWP
Sbjct:    1 VHPETVLHGILQERGYS-TQTAPTLETPFHRPPQPHQVESYDNA--LVGAVRGGDLAALRAMRAAGHTMTACNRFGESVLHTAVRHGSVDVVAFLLESGAHAGTCDDCGRTALHFALWTPAPRFDVATLLLNTDVRL-----------------------------LRCLDKRGASPLQYVRPEHWPLWCRFFHAKKHLYWP 170
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1014.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAC0_9PHAE1.500e-7159.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH5_ECTSI3.710e-4549.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TFS2_9STRA2.890e-3839.61Ankyrin repeat-containing protein n=3 Tax=Monodops... [more]
A0A835ZH90_9STRA4.350e-3540.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG28_9STRA1.380e-3444.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNI0_9PHAE1.600e-3439.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CA41_9STRA5.490e-3142.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C838_9STRA4.820e-2943.42Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
B7G9J4_PHATC8.080e-2833.92Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A836C8T3_9STRA3.320e-2734.65Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1014contigS-latissima_F_contig1014:11288..18883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.3
Seed ortholog evalue2.9e-26
Seed eggNOG ortholog2850.Phatr39760
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ankyrin repeats
EggNOG OGs2C0FJ@1,2S48R@2759,2XCZU@2836
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_005070.2
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons2
Model size1444
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1014.148.1prot_S-latissima_F_contig1014.148.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1014 11561..18828 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815375.7807817-UTR-S-latissima_F_contig1014:11287..115601622815375.7807817-UTR-S-latissima_F_contig1014:11287..11560Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1014 11288..11560 +
1693924845.4734359-UTR-S-latissima_F_contig1014:11287..115601693924845.4734359-UTR-S-latissima_F_contig1014:11287..11560Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1014 11288..11560 +
1622815375.824972-UTR-S-latissima_F_contig1014:18828..188831622815375.824972-UTR-S-latissima_F_contig1014:18828..18883Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1014 18829..18883 +
1693924845.5137558-UTR-S-latissima_F_contig1014:18828..188831693924845.5137558-UTR-S-latissima_F_contig1014:18828..18883Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1014 18829..18883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815375.7960217-CDS-S-latissima_F_contig1014:11560..122651622815375.7960217-CDS-S-latissima_F_contig1014:11560..12265Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1014 11561..12265 +
1693924845.4919121-CDS-S-latissima_F_contig1014:11560..122651693924845.4919121-CDS-S-latissima_F_contig1014:11560..12265Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1014 11561..12265 +
1622815375.8089905-CDS-S-latissima_F_contig1014:18417..188281622815375.8089905-CDS-S-latissima_F_contig1014:18417..18828Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1014 18418..18828 +
1693924845.5045571-CDS-S-latissima_F_contig1014:18417..188281693924845.5045571-CDS-S-latissima_F_contig1014:18417..18828Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1014 18418..18828 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1014.148.1

>prot_S-latissima_F_contig1014.148.1 ID=prot_S-latissima_F_contig1014.148.1|Name=mRNA_S-latissima_F_contig1014.148.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=372bp
MAVRIASIENHHHQEPPPSLRACPRTPTWLPVHRALRERRALRRASHLGV
DRRPAMGSPSCSASSINPSLVAELQRSSLARRRAFVTAAHKFCAKQQQQQ
QLQLQQLQQQQQQQKLAWPALSLLATAVITTPPPPPHIAAGAAAAAVPAE
LPRPAATAVRDDKDSKVNPEMYFLSLLEKRGRAVTKNVSSQEAGYVKEPT
TKQVLDYQSRPFMSDLVRKGDMDGLREAVKAGRGMDASNKFGESLVHVAC
RRGNMDVLRFLLENGGSLTGCDDLGRFPLHEVCWAVRPRFDIVRLFLDGT
ARRRPTTETTTTTSTTTPNDSSSSSNDEGLNPLLVTDKRGCTPLRYVKEE
SWPVWRQFLDEVVDEYWPSLV*
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mRNA from alignment at S-latissima_F_contig1014:11288..18883+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1014.148.1 ID=mRNA_S-latissima_F_contig1014.148.1|Name=mRNA_S-latissima_F_contig1014.148.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=7596bp|location=Sequence derived from alignment at S-latissima_F_contig1014:11288..18883+ (Saccharina latissima SLPER63f female)
CCGCTTTTGGCCTTTGGCACTCTTTGCTGTCGGATTTTTTACCGCATCAA
AGCTTCCGCGCGGATTTATCCCACTGCTACGTATCGCTACAAGCACACAG
AGCACACAGCACACAACCGAGACACTGCCAAACCACCAGCCACAACGCAC
CTACTCCACGCCACCAGCAACCCCAAGCGACCAACTACGAGGACAAGAGC
TTGTGCTGCTTCGCTGTCGACGACCGCCTCACGCAAAACTCAACACCTAC
CTGCTACTGGGTCGGAGAGAGCCATGGCTGTCAGGATTGCGTCGATCGAG
AACCACCACCACCAAGAACCCCCACCCTCCCTCCGGGCGTGCCCGCGCAC
TCCGACCTGGCTGCCGGTCCACCGCGCCCTTCGGGAGCGGCGCGCGTTGC
GGCGAGCGTCGCACCTGGGGGTGGACCGGCGTCCGGCAATGGGTTCGCCT
TCTTGCTCTGCTTCTTCCATCAACCCATCTCTCGTCGCGGAGCTACAACG
CTCGTCACTGGCGCGCAGACGAGCTTTCGTTACCGCGGCACACAAGTTCT
GCGCCAAACAGCAGCAGCAGCAGCAACTACAACTACAACAACTACAACAA
CAGCAACAGCAGCAAAAGCTAGCGTGGCCGGCGCTCTCGCTGTTGGCAAC
GGCGGTGATCACGACACCACCACCACCTCCTCATATTGCTGCTGGTGCTG
CTGCTGCTGCTGTCCCTGCTGAATTGCCTCGACCTGCCGCAACCGCTGTA
CGAGACGACAAGGACAGCAAGGTGAATCCGGAGATGTACTTCCTCAGCCT
CCTCGAAAAGCGTGGTCGGGCGGTCACCAAGAACGTGTCTTCCCAAGAAG
CCGGGTACGTGAAGGAGCCCACGACGAAGCAGGTCCTCGACTACCAGTCC
CGGCCGTTCATGAGCGACCTGGTGCGGAAAGGCGACATGGACGGGCTGCG
AGAGGCAGTGAAGGCCGGCAGAGGAATGGTGAGCGATTGTTGTTGTTGTT
GTTGTCTTCACATTAAACTGGTTTCAGTTGCTAATCCCTATAGTCTGATC
TAGCAAGATCACAGCCCGTGGTCACAAAAGTGCTAGAGCCATCAGAGAAT
CCTAAAGAACACGCACACTTAGCAGGGAAAGGATACACAAGTCCGAAGAG
GTACACCTAAAATCCCTACAGCATGTTATGCGTGTCCAAAACTGAACTAC
ACACCCGCAGTCTCCATTCGACTACAGCAGCATCGCCCCCCCCCCCCCCT
CCCACTATTTACAATGAATTTGCCGACTACAGCGTAACTACGTCTGAAGT
GCTGTCTGTACAAAAACACACGGTAGGCGTGGGAACAAGATGGAGCACGC
AGCTGCTGTCTGAAGTGCTGCCAGAATGACAGTCCGCGGGCACACGTGAA
AAAGAACAGCCAACCAAAGCCCCCCCCAAATGACAATTCCCGAACTACCT
GCCCTCGGTAGGCACAGCATTAAAAAAATCGACATGTTTGGGAAAATGTT
CCACATGAAGGGTTTCCACGATCAGGAACAATTAAGGCCCCCCGGGGTGC
CCGGGCCCCATCTCTGCCGGTCTTCTACAAACCGGCGTTCATCCACACGA
CCAACACAAATTCAGCGGAAAAAAAAAAAAAAAACGAAAAGTTGTCGAAA
AATAATTTTTGCCCCGTGCGGCCGGGTTGAGTGTCGGGGTCCGCGGTGTT
TCTGCCCGGGCGAGCTCCGGCGACGCTGCTCCCGGTGCGCTCCCCGGCGA
GTCCGGCGCCGCGCCCGGTGCGCTCTGGCCAGTCCTAGCCGCCCACACTC
GCCCCGCTCCGCCCCGACCGTCCTTTGCTGTTTTTCCCAGTCGGTTCTCG
CTTTCCCCCCTTTTGAATCATGGTGTTTGGGTTTGGAAAAAAAAAATTTC
CGCCCCGAAGGGGTAAAACCCCCCAATTTCAGCTCTTTCGCCCCCGCCCT
TTTCCCCCTTTTGAGGCAAAGCCGGGGTACTGGGGACGCCCCCTCTAGCA
AAAACATAGGGCGTGAAAGTAGGGCCGCCACCTTCGGGTGGGTTGCCTCC
GCGCAAAAAAGTGGAGGGGACATTGCGTCTAAAACCGAGGGCCCAAAAAA
GGCCCGGCATCTAAAACTTTGCGCCTGACGCCCAGTGCCGATCCAGCCCC
CGTGCACACGCTTCGCGGCGGGTGGGGCAAGCGCAAGGGGGGGTATCGGC
CCGCTTAGGGGGAGTCTCCCTTGTCGCTAGAAAAAACCCCCCCCCCGTTT
GGGGGGCCCTCCCAAAAAAAAAGGGGCCTTGCCGAGGCAGCGAGGGGAAA
AAGGGGTTTTGCGGGGTTATTTTTATGTGTTAAATAGTAGGGGTTGAATG
ATTTTGTTTTTTTTCCATGTAAAAAATCGTCTTGGAACAGGGGAAAACCC
CTTTCTTTTTTTTTTGAAATCGTACGAAGTAATATGTACGAAACATACCT
AAAGAAAGGGTTTGAAAAAAAAGTTTTTTTTTCCGTTTTTTTTTTCTTCT
TTAAATAATACCTCTTTTCCGGGAAAATGAAAGGGAACATGTGGATTAAT
ACCAATCCCAAAACCCGGTCCAAATTTTTCCCGTTTTAATGTATGATAAA
GGGGAACTTTTTTAAAATTTTTTTCAGATGAGCCGAAAATCTTTTTCCCG
TTTTTTTTCACGGTTTACCCTTTTTACACTTCATTACGCATACGTCAGCT
GTGAGTTAGACCGATTGAGTGATTGATACCCAAATTTCAGAAGATCTTGT
CTGTGCTCCTCGTATTTCTGTGGGCGTCATCGGATGACGCGACGTCGTCG
GTTGACGGCAGTTCACCAGATAAGAGAGACAGAACAAAGCGACGTCGACA
AGTCGAGGGTCGAGGCCCTTTCTGAACCAACCTACCCCTGCTGCTTGGTA
CTGACAGCCGCTCGTGCGACATAGACCGGCCATACATGCAATGTGGAAAG
CAGGCAGACATGCCCCAGATAGTATATCATACCCTGTTCGTACCCAGCCT
GTAGCCTGTATGGGCTTCGTATACTTCGTATGACGCTACTCGTATCATAG
GTATGAAATGACCCTTTTTTTGGAGGGTCATAATAATGGCCCCATACGTA
ATAACTTACACGTTCACGAGGCGTCGGCGATGGGGGTGGGGTGGACTGCG
CACGCACGCGCGGTAAATATCATACATCATACATACAGTAGCAGCGGCAA
CAGCAGCGTGCGTTGGGCAACGGTCGATGTCACTTGATGGCGCATGCCCA
CCTAGACCCCACGTGTCATCTTGGATGATACGAGAGAGTTGGTGGTGGTG
ACGGATGCGGCGCAATCAAAAAAAATATCTCGATTTTAGGGTAGAAACAA
TTATATAAAATTATTATAAACACGTCAGCGCGTCAGCTGTAGGGATGTAC
ATCAACTCATAATCACGTGTTGATTATGATTATTTTTGGTGATTAATTTT
AATCACGTGATGTGATTAGTTCTTGTTGATTGTTGATTATAAATCAACTA
GCCATGATTAGTTGATTATTGAACATAATCATGATTAGTTGATTATTTTT
AAATAAAAAAGGGGCGTTTTGTCATGTAACCGTAAAAAAAATTGCCTCCG
GCGCACATTGCCACAAATTAATTAATCAATGATTAGTTGATTATTGAATT
TCATCATGATTAGTTGATTATTTTTTAATAAAAAAGAGGCTTTTTGTTAT
GTAACCGTGAAAACCATCAATAATCAACCGATAATCATGATTATTAATCA
CATCATCGTGTAGTTGATTGTGTTGATATTAATCAACTAACCATGATTAA
ATCAACACGATTTGGACAAATTAATCAACAATCAAATCAACCCCGAAAAA
GAGTTGATGTACATCCCTAGTCAGCTGTGATTTCAACCGATTGAAAAGTA
GAAACAATTACGGTACTGCTGTATACCGTTTACCACACTCTTGTAACTGG
TAACAGCAGTATAATGTTGTTTTTTTAATTTTTTAAATACATACGTAATC
CGTCGGTGTGGTCGTTGGCCGATGGTCGGCATCTCTCCTGGCGTGATGTC
CACATATTGCTGTACCCACGTTACAGGTAGTATGGAGCACCTGGTCCATA
CCCTGGTGTGGTATACCTCGAGCAGTACGAATTGAGCGTGCTTGATTTGT
TGATGGTTCTGAAAAACTGGAAAGGGACACGTGTTCCGCTTTCTGTGTTG
CTACTGCTGCTGTTGCGTTGCTACCATACGCGTATTCCACAGGCGACTGC
TAACTGCTGTGGCTGCGGGTGGTGGCGTCTATCTCTAATTCGTCTCCCCG
AATTCAGAAAATAAATAATTAACTCTAATTTTGGTACAATTAATTATCTT
TGTCTACGAGTATAACGTATTATTTTGTGCACTGCATTTTGCGCGTATTA
TGTTATTACGTTATTACCCGCAAAGCAGAACAAACAGCAGCAGTAAATTA
CGCATCACGCATATATACAAGTATGTATGTTCCATCTACATATACGTACG
TGTACGTACATCAGTATATTTCCGCGTACGGAGTATACACGATATTACGA
ATACTGTGACTGACCCAGCAGGGAAAAATTGAAAAAATGACGGTACAAAG
TGACGATTTTGAGATGAGATTCGTACACAAGTTGGTGTCCTATATATTAG
TAGGTATCGCACGTACACCGCAAGATTGCAAGGAGTCGCACAGCACGGGT
GCTTCACGATACTACTTGCCTATATACCCGTACTACTGGTGATCGTGTGT
ATCGTTTCCCTGGTATGATATACCCGTAGAAAAGCCGCACGTACTCTTGC
AAACGTAGGACTGGAGTCATGCTGCCGCCACGTCTTGCGCAAGCGTAGCG
TAGATAGGCTAAGCGTAGACCCCCTCCCTTGGACCTTGGACCGCAACGAA
TGTTCTATATATATGTACTATTTATAGTAAGAGGCGGGGCTCACATGGCT
CTGCATACTCTTGTGAGTATACACTCTTTGTGAGTATACGAGAGAGTCAG
ATAAACAAAATCAAGACAAGATTAAAAATACTATTATTATATTAATACTC
GAAACATGCGAAATATAACAAAATACATTTTTTTCGGGTGTTTTCTACTA
CTCTGTACTGCTGTACATACGCATACGAGCTGGGCCAGCCATATAATGGT
TTAAACGTCGGATTGGCCATGCCCCCATCAATTTTTCGAATTTGGACTTG
ATGTTTTGACACGGTGTAGTTCATGCACTCGTCAACAGGTTGACCTTCGG
CCCTATGCATTATTTTTTTTTTTTTCCAAGAGATATGACCGATCCAAAAA
CCCGAAAAAATACAAAATCGACCAAAACTAGTAAAAAAAACGAAAAAATA
AATAGGGCCGAAGGTGAATGCCTTTGAACGTGCGATTCAAATCCGGGGTC
GAAAACTCAGTGCAAAATACTCAAAATTGAGCGGGGCATCGCAGAAATGC
CATTTTTTTCGTAATGACTTGAATAATGTATGGAAATCGAGTTTTGGTGA
TATCTCTTGATGGGTGGCGAATTGGGCAACGAGACTTTCATCGCTCTTCT
CTGTGTGTCTTCAGCACTGTCTCCACCAAGTTTCATAGAGATCGAAAACG
ACGATTTTTATACGAATTTTGTGTAAAAAAGTAGGTGTTTTTGAGTTTTC
GCGGATATCTCAGCGAGATCAAGTCGAGAAAATAAAAAGTATAGAAATTT
TCATACACGCTTTTTTTTGCATAAGCAGTGGTGTGTCAGGGGTAATGTCC
CCAATTTTTGTAGCCTAATTCGCAGTGGTTCACGAGATACGACTCAACAA
AGCTTTATCAGCTTTACGGCTGGCCCAGCTCGTACACTTCGTATATATTA
GATATCAACTCTAATTCCAAGTGTTAGCACTACAACTTTTCGAGTGATAA
ATTGATTCCGGTAAACCAATACAGAGCCTGTTTGCACCAGGTATATATTT
ATGACGGGGGAGCATAGCCCATACCATTACAATAGGGACCTACGGCCTAC
GGGAAACAGAAAAAAACAGTATATTTTCCCCTATTTTTACGAACAATATT
TGGTCCTAATTACTATACTATTTAATACGATGATCCCCCGTATTACTTGA
ATACGTGAAAGGTTTTCGGAGGGCAGCAACTGGATACGAGGTAATAACTG
GATACAAGTCTTGAAAAAAGTATTACCTTACGTATATATCGTACCTCATC
TCATGTTGCAGGTGTGATGTGTGATACCTGTCACATTTGGTACCACTCTG
TCCAGAAATATAAGCACCGTTTATACATAAATGTTCAATAATAACGCTGC
TTATATTTCTGGACATAGTGATATGTATTAACGCATTCACGTGGCCAATT
TTCGACGAGAGATTTGGAAACGTCATCCCGAGAAAGCCTCACGGAAATCC
TCTTAACCCATTCAGAACTGAAAAAAATGTCCCACACTAATTCCAAGTAG
TTTGTCCCCAAAGTCAGGGGACCAGTTCTTAAGGGGTTAACGTAGTATTA
ATAGTTACCCCCCCTGAGCACTGAGCACGATACATAGCCACTCATCCCCC
ACCCCTCTTTCACTCGACTCGTCACGCACCCACAATTTTTTTTCTTTCTT
TTTTCCAAAAGAGAGCCCGCGGTTTGTTTTGGTTTATGTTCTGGTATGAT
GGTATGATATCATACGCGTACTTTTTTTTTTTTTGGTTTTTGTGGTGGAA
GGTTTGAAGATTTTTTTGCAACGTACCGCCGTGTCGGCGTGTCACACTTT
TCATGCGTCATATTCATACATTGTCATACATGCACCGGTGTTGGCAGCAG
CAAGAGGCGAAAGACACAAAATACACCGCTCGCTGCCGCCGGTCGGTCGG
TTGGAGAGGAGGGGGGGAGATTTTTCTGATTTTGGGCACCAGGAGCCCAT
GACGGCTTGTTTGTTTATTTTCTCTCTTCTTTTTACACTTATCGATAGGT
ACATAGAGAACAAGGCTGCTGCTGCTGCTGCTGCTGCTGCCGCAGTTGTC
TTTCGCTCGACATTGACGTCACACAAACACCCCGCTTTCACGTTTTCTGA
CCTCCCTTCCTCCTCCTCCTCCTGCTCCTCCTCTCCCTCTCCCCCCTGTT
TGTTTGTTCCAACTCTACTTGTTGCTGCAGGACGCCTCGAACAAGTTCGG
GGAGTCGCTGGTGCACGTCGCCTGTCGGCGCGGCAACATGGACGTGCTGC
GCTTCCTGCTCGAGAACGGCGGGTCCCTGACGGGCTGCGACGACCTCGGC
CGCTTCCCGCTCCACGAGGTCTGCTGGGCGGTGCGACCCCGCTTCGACAT
CGTGCGCCTCTTCCTCGATGGAACGGCGCGACGACGGCCGACGACGGAAA
CGACCACCACCACCTCCACCACCACCCCCAACGACAGCAGCAGCAGCAGC
AACGATGAGGGGCTGAACCCCCTCCTGGTGACGGACAAGCGCGGTTGCAC
GCCCCTGCGCTACGTGAAGGAGGAGTCCTGGCCGGTGTGGCGGCAATTCC
TAGACGAGGTCGTCGACGAGTACTGGCCGTCGCTTGTCTAAGACGAGACA
ACGAACGCCCTCACAGGGAGGGGGATGTTTTCACGGGAGGTGGGGG
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Coding sequence (CDS) from alignment at S-latissima_F_contig1014:11288..18883+

>mRNA_S-latissima_F_contig1014.148.1 ID=mRNA_S-latissima_F_contig1014.148.1|Name=mRNA_S-latissima_F_contig1014.148.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=2232bp|location=Sequence derived from alignment at S-latissima_F_contig1014:11288..18883+ (Saccharina latissima SLPER63f female)
ATGGCTGTCAGGATTGCGTCGATCGAGAACCACCACCACCAAGAACCCCC
ACCCTCCCTCCGGGCGTGCCCGCGCACTCCGACCTGGCTGCCGGTCCACC
GCGCCCTTCGGGAGCGGCGCGCGTTGCGGCGAGCGTCGCACCTGGGGGTG
GACCGGCGTCCGGCAATGGGTTCGCCTTCTTGCTCTGCTTCTTCCATCAA
CCCATCTCTCGTCGCGGAGCTACAACGCTCGTCACTGGCGCGCAGACGAG
CTTTCGTTACCGCGGCACACAAGTTCTGCGCCAAACAGCAGCAGCAGCAG
CAACTACAACTACAACAACTACAACAACAGCAACAGCAGCAAAAGCTAGC
GTGGCCGGCGCTCTCGCTGTTGGCAACGGCGGTGATCACGACACCACCAC
CACCTCCTCATATTGCTGCTGGTGCTGCTGCTGCTGCTGTCCCTGCTGAA
TTGCCTCGACCTGCCGCAACCGCTGTACGAGACGACAAGGACAGCAAGGT
GAATCCGGAGATGTACTTCCTCAGCCTCCTCGAAAAGCGTGGTCGGGCGG
TCACCAAGAACGTGTCTTCCCAAGAAGCCGGGTACGTGAAGGAGCCCACG
ACGAAGCAGGTCCTCGACTACCAGTCCCGGCCGTTCATGAGCGACCTGGT
GCGGAAAGGCGACATGGACGGGCTGCGAGAGGCAGTGAAGGCCGGCAGAG
GAATGATGGCTGTCAGGATTGCGTCGATCGAGAACCACCACCACCAAGAA
CCCCCACCCTCCCTCCGGGCGTGCCCGCGCACTCCGACCTGGCTGCCGGT
CCACCGCGCCCTTCGGGAGCGGCGCGCGTTGCGGCGAGCGTCGCACCTGG
GGGTGGACCGGCGTCCGGCAATGGGTTCGCCTTCTTGCTCTGCTTCTTCC
ATCAACCCATCTCTCGTCGCGGAGCTACAACGCTCGTCACTGGCGCGCAG
ACGAGCTTTCGTTACCGCGGCACACAAGTTCTGCGCCAAACAGCAGCAGC
AGCAGCAACTACAACTACAACAACTACAACAACAGCAACAGCAGCAAAAG
CTAGCGTGGCCGGCGCTCTCGCTGTTGGCAACGGCGGTGATCACGACACC
ACCACCACCTCCTCATATTGCTGCTGGTGCTGCTGCTGCTGCTGTCCCTG
CTGAATTGCCTCGACCTGCCGCAACCGCTGTACGAGACGACAAGGACAGC
AAGGTGAATCCGGAGATGTACTTCCTCAGCCTCCTCGAAAAGCGTGGTCG
GGCGGTCACCAAGAACGTGTCTTCCCAAGAAGCCGGGTACGTGAAGGAGC
CCACGACGAAGCAGGTCCTCGACTACCAGTCCCGGCCGTTCATGAGCGAC
CTGGTGCGGAAAGGCGACATGGACGGGCTGCGAGAGGCAGTGAAGGCCGG
CAGAGGAATGGACGCCTCGAACAAGTTCGGGGAGTCGCTGGTGCACGTCG
CCTGTCGGCGCGGCAACATGGACGTGCTGCGCTTCCTGCTCGAGAACGGC
GGGTCCCTGACGGGCTGCGACGACCTCGGCCGCTTCCCGCTCCACGAGGT
CTGCTGGGCGGTGCGACCCCGCTTCGACATCGTGCGCCTCTTCCTCGATG
GAACGGCGCGACGACGGCCGACGACGGAAACGACCACCACCACCTCCACC
ACCACCCCCAACGACAGCAGCAGCAGCAGCAACGATGAGGGGCTGAACCC
CCTCCTGGTGACGGACAAGCGCGGTTGCACGCCCCTGCGCTACGTGAAGG
AGGAGTCCTGGCCGGTGTGGCGGCAATTCCTAGACGAGGTCGTCGACGAG
TACTGGCCGTCGCTTGTCTAAGACGCCTCGAACAAGTTCGGGGAGTCGCT
GGTGCACGTCGCCTGTCGGCGCGGCAACATGGACGTGCTGCGCTTCCTGC
TCGAGAACGGCGGGTCCCTGACGGGCTGCGACGACCTCGGCCGCTTCCCG
CTCCACGAGGTCTGCTGGGCGGTGCGACCCCGCTTCGACATCGTGCGCCT
CTTCCTCGATGGAACGGCGCGACGACGGCCGACGACGGAAACGACCACCA
CCACCTCCACCACCACCCCCAACGACAGCAGCAGCAGCAGCAACGATGAG
GGGCTGAACCCCCTCCTGGTGACGGACAAGCGCGGTTGCACGCCCCTGCG
CTACGTGAAGGAGGAGTCCTGGCCGGTGTGGCGGCAATTCCTAGACGAGG
TCGTCGACGAGTACTGGCCGTCGCTTGTCTAA
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