mRNA_S-latissima_F_contig1011.134.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1011.134.1
Unique NamemRNA_S-latissima_F_contig1011.134.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.840e-74
Identity = 144/299 (48.16%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVF---PGDLTVKLLDVAYVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRI-EPDDGYVPTAST------ETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            W AD+G +FHMT S   + D++ C   V        ++   GTL +VF     + +V+L +V Y P + +NLFS  A             D  ++ F G++ F+         AYR+ E   G V  A T      +T++D+N FH +  HS++ LLR TAK LG ELVG++  CTGCSMAK  +K I   TKSR+ +KLGRVFVDL G K   S+ G  Y M+VKDD++R AW+YFLKHKSD+G AFR FLA  RADGVPS VEIVRSDNGGEFFGGEF  VC +  IKQEFT A SP
Sbjct:  232 WYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFSPSAEFDGESWNGLGGPDGVMTAFKGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSP 530          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 3.240e-74
Identity = 142/299 (47.49%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFP---GDLTVKLLDVAYVPEIAFNLFSLMAAHKQGV-TFTTEEKDLCISLFNGRL-RFEGDGSSYSGFAYRIEPDDGYVPTA-----STETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            ++AD+GA+ HM  ++D       CD +VR+       +VGYG +TV      G   + L  VA+VP + +NL SL +    G  T T  + +L +    G +  F   G+ Y    +R   +      A     +  T VDIN FHC  GHS+E+LLR TAK  G  LVG+L+ C GCS AKG  KPIPN T +RA +KL RVFVDLSG  R  SL G  Y ++VKDDY+R   VYFLKHKSD+ +AF ++LA+ RA+G PS V +VRSDNGGEFF GEFG VC++YCIKQEFT A SP
Sbjct:  369 YVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSP 667          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 3.270e-74
Identity = 142/299 (47.49%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFP---GDLTVKLLDVAYVPEIAFNLFSLMAAHKQGV-TFTTEEKDLCISLFNGRL-RFEGDGSSYSGFAYRIEPDDGYVPTA-----STETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            ++AD+GA+ HM  ++D       CD +VR+       +VGYG +TV      G   + L  VA+VP + +NL SL +    G  T T  + +L +    G +  F   G+ Y    +R   +      A     +  T VDIN FHC  GHS+E+LLR TAK  G  LVG+L+ C GCS AKG  KPIPN T +RA +KL RVFVDLSG  R  SL G  Y ++VKDDY+R   VYFLKHKSD+ +AF ++LA+ RA+G PS V +VRSDNGGEFF GEFG VC++YCIKQEFT A SP
Sbjct:  382 YVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSP 680          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 3.300e-74
Identity = 142/299 (47.49%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFP---GDLTVKLLDVAYVPEIAFNLFSLMAAHKQGV-TFTTEEKDLCISLFNGRL-RFEGDGSSYSGFAYRIEPDDGYVPTA-----STETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            ++AD+GA+ HM  ++D       CD +VR+       +VGYG +TV      G   + L  VA+VP + +NL SL +    G  T T  + +L +    G +  F   G+ Y    +R   +      A     +  T VDIN FHC  GHS+E+LLR TAK  G  LVG+L+ C GCS AKG  KPIPN T +RA +KL RVFVDLSG  R  SL G  Y ++VKDDY+R   VYFLKHKSD+ +AF ++LA+ RA+G PS V +VRSDNGGEFF GEFG VC++YCIKQEFT A SP
Sbjct:  525 YVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSP 823          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 6.060e-74
Identity = 143/299 (47.83%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVF---PGDLTVKLLDVAYVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRI-EPDDGYVPTAST------ETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            W AD+G +FHMT S   + D++ C   V        ++   GTL +VF     + +++L +V Y P + +NLFS  A             D  ++ F G++ F+         AYR+ E   G V  A T      +T++D+N FH +  HS++ LLR TAK LG ELVG++  CTGCSMAK  +K I   TKSR+ +KLGRVFVDL G K   S+ G  Y M+VKDD++R AW+YFLKHKSD+G AFR FLA  RADGVPS VEIVRSDNGGEFFGGEF  VC +  IKQEFT A SP
Sbjct:  525 WYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSMELKNVLYSPNLGYNLFSPSAEFDGESWNGLGGPDGVMTAFKGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSP 823          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 3.060e-73
Identity = 139/299 (46.49%), Postives = 179/299 (59.87%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVF---PGDLTVKLLDVAYVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRIEPDD-GYVPTAST------ETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            W AD+G +FHMT     + D++ C   V+       ++   GTL +VF        V+L +V Y P + +NLFS  A             D  ++ FNG + F+         AYR+E +  G V  A T      E+ +D+N FH +  HS+E LLR TAK LG+EL GK+  CTGCSM+K ++K I + TK R+ +KLGRVFVDL G K   S+ G  Y M+VKDD++R  W+YFLK KSD+  AFR FLA  RADG+PS VEIVRSDNGGEFFGGEF  VC +  IKQEFT A SP
Sbjct:  431 WYADTGTAFHMTDRLSCMKDLKPCHKNVKGIGGVTCEIEFSGTLELVFVTADSQFPVELENVLYSPNLGYNLFSPSAEFDGESWNYLGGPDGVMTAFNGHVTFQNLDGMLISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSP 729          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 3.170e-73
Identity = 139/291 (47.77%), Postives = 177/291 (60.82%), Query Frame = 1
Query:    7 ADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFP---GDLTVKLLDVAYVPEIAFNLFSLMAAHKQGV-TFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRIEPDDGYVPTA-----STETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFT 852
            AD+GA+ HM  ++D       CD +VR+       +VGYG +TV      G   + L  VA+VP + +NL SL +    G  T T  + DL +      +RF    + Y    +R   +      A     +  T VDIN FHC  GHS+E+LLR TAK  G  LVG+L+ C GCS AKG  KPIPN T +RA +KL RVFVDLSG  R  SL G  Y ++VKDDY+R   VYFLKHKSD+ +AF ++LA+ RA+G PS V +VRSDNGGEFF GEFG VC++YCIKQEFT
Sbjct:  191 ADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKYDLELERGGESVRFPRYSNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFT 481          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 5.590e-73
Identity = 139/299 (46.49%), Postives = 180/299 (60.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVF---PGDLTVKLLDVAYVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRI-EPDDGYVPTAST------ETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            W AD+G +FHMT S   + D++ C   V    +   +V   GTL +VF     + +V+L +V Y   + +N+FS  A             D  ++ FNG++ F+         AYR+ E   G V  A T      ET++DIN FH +  HS+E LLR TAK LG +LVG +  C+GCSM+K  RK I   TK R+ +KLGRVFVDL G K   S+ G  Y M+VKDD++R  W+YFLK++SD+G AFR FLA  RA+ VPS VEIVRSDNGGEFFGGEF  VC +  IKQEFT A SP
Sbjct:  113 WYADTGTAFHMTDSLSCMKDLKPCHKSVNGIGSVSCEVAFSGTLELVFVTADSEFSVELKNVLYSQNLGYNIFSPSAEFDGESWNGPGGPDGVMTAFNGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSP 411          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 3.500e-71
Identity = 134/299 (44.82%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    1 WIADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVF---PGDLTVKLLDVAYVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGFAYRIEPDD-GYVPTASTETS------VDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            W AD+G +F+MT S   + DV  C +KV+       +V   GTL V F     + + +L +V Y P++ +NLFS  A             D  ++ F+G + F+         AYR+  +  G V  A T ++      +D+N FH + GH++E +LR TAK LG+EL GK+  C+GCSM K  RK I +VT + + +KLGRVFV+L G K   S+ G  Y M++KDD++R AW+YFL+ KSD+G AFR FLA+ RADG+PS +EIVRSDNGGEFFGGEF  VC +  IKQEFT A SP
Sbjct:  252 WYADTGTAFNMTDSLSCMKDVNPCHNKVKGIGGVTCEVALSGTLEVAFVSADSEFSAELKNVLYAPKLGYNLFSPSAEFDGESWNGLGGPDGVMTAFHGHVTFQNFDGMLVATAYRLGHNSIGSVLAALTPSNPKRVKIMDVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSP 550          
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.690e-68
Identity = 135/298 (45.30%), Postives = 178/298 (59.73%), Query Frame = 1
Query:    4 IADSGASFHMTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFP---GDLTVKLLDVAYVPEIAFNLFSLMAAHKQGV-TFTTEEKDLCISLFNGRLRFEGD-GSSYSGFAYRIEPDDGYVPTA-----STETSVDINVFHCVQGHSNELLLRETAKSLGLELVGKLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGARYVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSDNGGEFFGGEFGEVCKQYCIKQEFTNADSP 867
            +AD+GA+ HM  ++D       CD +VR+       +VGYG +TV      G   + L  VA+VP + +NL SL +    G  T T  + +L +    G   +    G+ Y     R   +  Y   A     ++   V+IN FH   GHS+E+LLR TAK  G  LVG+L+ C GCS AKG  K IPN T +RA ++L RVF+DLSG  R  SL G  Y ++VKD Y+R   VYFLKHKSD+ +AF ++LA+ RA+G PS V +VRSDNGGEFF GEFG VC++YCIKQEFT A SP
Sbjct:  396 VADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHTEHAYTAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSP 693          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1011.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZH7_9PHAE2.840e-7448.16Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZQ8_9PHAE3.240e-7447.49Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.270e-7447.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.300e-7447.49Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JBA7_9PHAE6.060e-7447.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE3.060e-7346.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8P7_9PHAE3.170e-7347.77Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JV76_9PHAE5.590e-7346.49Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JH25_9PHAE3.500e-7144.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF7_9PHAE1.690e-6845.30Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1011contigS-latissima_F_contig1011:126809..127765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score114.8
Seed ortholog evalue6.6e-23
Seed eggNOG ortholog400682.PAC_15712908
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BI7U@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons2
Model size867
Cds size837
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1011.134.1prot_S-latissima_F_contig1011.134.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1011 126839..127765 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.5263407-UTR-S-latissima_F_contig1011:126808..1268381622815373.5263407-UTR-S-latissima_F_contig1011:126808..126838Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1011 126809..126838 +
1693924844.4369454-UTR-S-latissima_F_contig1011:126808..1268381693924844.4369454-UTR-S-latissima_F_contig1011:126808..126838Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1011 126809..126838 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.5349329-CDS-S-latissima_F_contig1011:126838..1271731622815373.5349329-CDS-S-latissima_F_contig1011:126838..127173Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1011 126839..127173 +
1693924844.449616-CDS-S-latissima_F_contig1011:126838..1271731693924844.449616-CDS-S-latissima_F_contig1011:126838..127173Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1011 126839..127173 +
1622815373.5432258-CDS-S-latissima_F_contig1011:127263..1277651622815373.5432258-CDS-S-latissima_F_contig1011:127263..127765Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1011 127264..127765 +
1693924844.4590943-CDS-S-latissima_F_contig1011:127263..1277651693924844.4590943-CDS-S-latissima_F_contig1011:127263..127765Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1011 127264..127765 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1011.134.1

>prot_S-latissima_F_contig1011.134.1 ID=prot_S-latissima_F_contig1011.134.1|Name=mRNA_S-latissima_F_contig1011.134.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=279bp
MTHSADLLSDVRLCDDKVRIGDNHLIDVVGYGTLTVVFPGDLTVKLLDVA
YVPEIAFNLFSLMAAHKQGVTFTTEEKDLCISLFNGRLRFEGDGSSYSGF
AYRIEPDDGYVPTASTETSVDINVFHCVQGHSNELLLRETAKSLGLELVG
KLKPCTGCSMAKGYRKPIPNVTKSRATEKLGRVFVDLSGPKRTPSLTGAR
YVMLVKDDYSRHAWVYFLKHKSDSGDAFRKFLADARADGVPSKVEIVRSD
NGGEFFGGEFGEVCKQYCIKQEFTNADSP
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mRNA from alignment at S-latissima_F_contig1011:126809..127765+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1011.134.1 ID=mRNA_S-latissima_F_contig1011.134.1|Name=mRNA_S-latissima_F_contig1011.134.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=957bp|location=Sequence derived from alignment at S-latissima_F_contig1011:126809..127765+ (Saccharina latissima SLPER63f female)
TGGATAGCGGACAGTGGTGCATCCTTTCACATGACCCATTCAGCTGACCT TTTGAGCGATGTAAGACTGTGCGATGACAAGGTTAGAATCGGTGACAACC ATCTGATCGACGTGGTAGGGTACGGAACGCTGACTGTTGTATTCCCAGGG GATCTGACTGTCAAGCTGTTGGATGTAGCCTACGTGCCGGAAATCGCATT CAACTTGTTTTCGCTGATGGCTGCGCACAAGCAGGGAGTAACCTTTACGA CTGAGGAGAAAGACTTGTGCATTTCTCTTTTCAATGGGAGGTTGAGGTTT GAAGGTGATGGATCCAGTTACTCCGGATTCGCTTACAGAATAGAGCCAGA CGACGGCTATGTGCCGTTCCCCCTTGAAACCCCCAACCCTCCGGAGACTT GTGTTGAATATGGTTGCGATTTTCCCCTTGCATTTCCCGTGCTTGCACCC GGTAGTACCGCGTCTACTGAGACTAGTGTAGACATCAACGTTTTTCACTG CGTGCAAGGTCACTCGAATGAACTACTCTTGCGAGAGACCGCGAAATCAC TCGGTCTAGAACTGGTAGGAAAACTTAAGCCCTGTACGGGATGCTCTATG GCGAAAGGCTACCGCAAGCCTATCCCTAACGTCACTAAATCACGCGCGAC AGAGAAGTTGGGGAGAGTTTTTGTTGACCTCAGCGGACCTAAGAGAACAC CTTCCCTGACGGGTGCGCGGTATGTCATGCTTGTGAAGGATGACTACTCT CGCCACGCGTGGGTGTATTTTCTGAAGCATAAATCAGATTCAGGAGACGC ATTTAGGAAGTTTTTGGCTGACGCGCGCGCCGACGGAGTACCCTCGAAAG TTGAGATAGTAAGGTCTGACAACGGGGGGGAGTTTTTCGGTGGTGAGTTT GGAGAGGTGTGCAAACAGTATTGCATCAAGCAGGAATTCACCAATGCCGA TAGCCCT
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Coding sequence (CDS) from alignment at S-latissima_F_contig1011:126809..127765+

>mRNA_S-latissima_F_contig1011.134.1 ID=mRNA_S-latissima_F_contig1011.134.1|Name=mRNA_S-latissima_F_contig1011.134.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=1674bp|location=Sequence derived from alignment at S-latissima_F_contig1011:126809..127765+ (Saccharina latissima SLPER63f female)
ATGACCCATTCAGCTGACCTTTTGAGCGATGTAAGACTGTGCGATGACAA
GGTTAGAATCGGTGACAACCATCTGATCGACGTGGTAGGGTACGGAACGC
TGACTGTTGTATTCCCAGGGGATCTGACTGTCAAGCTGTTGGATGTAGCC
TACGTGCCGGAAATCGCATTCAACTTGTTTTCGCTGATGGCTGCGCACAA
GCAGGGAGTAACCTTTACGACTGAGGAGAAAGACTTGTGCATTTCTCTTT
TCAATGGGAGGTTGAGGTTTGAAGGTGATGGATCCAGTTACTCCGGATTC
GCTTACAGAATAGAGCCAGACGACGGCTATGTGCCATGACCCATTCAGCT
GACCTTTTGAGCGATGTAAGACTGTGCGATGACAAGGTTAGAATCGGTGA
CAACCATCTGATCGACGTGGTAGGGTACGGAACGCTGACTGTTGTATTCC
CAGGGGATCTGACTGTCAAGCTGTTGGATGTAGCCTACGTGCCGGAAATC
GCATTCAACTTGTTTTCGCTGATGGCTGCGCACAAGCAGGGAGTAACCTT
TACGACTGAGGAGAAAGACTTGTGCATTTCTCTTTTCAATGGGAGGTTGA
GGTTTGAAGGTGATGGATCCAGTTACTCCGGATTCGCTTACAGAATAGAG
CCAGACGACGGCTATGTGCCTACCGCGTCTACTGAGACTAGTGTAGACAT
CAACGTTTTTCACTGCGTGCAAGGTCACTCGAATGAACTACTCTTGCGAG
AGACCGCGAAATCACTCGGTCTAGAACTGGTAGGAAAACTTAAGCCCTGT
ACGGGATGCTCTATGGCGAAAGGCTACCGCAAGCCTATCCCTAACGTCAC
TAAATCACGCGCGACAGAGAAGTTGGGGAGAGTTTTTGTTGACCTCAGCG
GACCTAAGAGAACACCTTCCCTGACGGGTGCGCGGTATGTCATGCTTGTG
AAGGATGACTACTCTCGCCACGCGTGGGTGTATTTTCTGAAGCATAAATC
AGATTCAGGAGACGCATTTAGGAAGTTTTTGGCTGACGCGCGCGCCGACG
GAGTACCCTCGAAAGTTGAGATAGTAAGGTCTGACAACGGGGGGGAGTTT
TTCGGTGGTGAGTTTGGAGAGGTGTGCAAACAGTATTGCATCAAGCAGGA
ATTCACCAATGCCGATAGCCCTTACCGCGTCTACTGAGACTAGTGTAGAC
ATCAACGTTTTTCACTGCGTGCAAGGTCACTCGAATGAACTACTCTTGCG
AGAGACCGCGAAATCACTCGGTCTAGAACTGGTAGGAAAACTTAAGCCCT
GTACGGGATGCTCTATGGCGAAAGGCTACCGCAAGCCTATCCCTAACGTC
ACTAAATCACGCGCGACAGAGAAGTTGGGGAGAGTTTTTGTTGACCTCAG
CGGACCTAAGAGAACACCTTCCCTGACGGGTGCGCGGTATGTCATGCTTG
TGAAGGATGACTACTCTCGCCACGCGTGGGTGTATTTTCTGAAGCATAAA
TCAGATTCAGGAGACGCATTTAGGAAGTTTTTGGCTGACGCGCGCGCCGA
CGGAGTACCCTCGAAAGTTGAGATAGTAAGGTCTGACAACGGGGGGGAGT
TTTTCGGTGGTGAGTTTGGAGAGGTGTGCAAACAGTATTGCATCAAGCAG
GAATTCACCAATGCCGATAGCCCT
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