mRNA_S-latissima_F_contig1008.82.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: D7FVP4_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP4_ECTSI) HSP 1 Score: 353 bits (907), Expect = 7.560e-112 Identity = 199/385 (51.69%), Postives = 248/385 (64.42%), Query Frame = 3
Query: 219 LLLHLGVPLTLASAPPFAVQPNRGSLPCAGPPNFVTHFH------RHRRTRSVRSSPNAPRLHPVDSAPEGVPSSLFTFRPKS-----PYARNTESNDNSXXXXXXXXXXXXXXXXXXXAVGVET-LHAGLVEESDLGGVSELLVEVFQPGVVLADGDFSDLEAIVVGAPLEMTNRYMKAVAYNEIFYSLKSRCGKRLERGDFSLTNNAVVLAVRD--------------QAAPAESGGXXXXXEGEVIAVVELTLRKPDGTLPTNWPFPVPWRSAA------------PGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLWMRKLLSLPTIRYQVKQFKGRR 1259
+LL +G PL A A + + G+L G T R ++TR +S LHP S P+GVPSSLFTF+P++ P + D++ G E L AGL++ESDL VS LLVEVF+PGVVLADG+F+ LE++++GAP++MTN YMKAVAYNEI YSL+SRCG RL RGDF +++A+VLAVR Q A+ G XXXX E++AVVELT+RKPDG+LP NWPFP PWR A P ++W+PYMCNLAVAE +RG GYGKQLVRLCEH+AKN WGYERM+LHVD+ DPAATGLYSS+GY+ +E+YD PLWMRKL PTIRYQVK+FKGR+
Sbjct: 1 MLLTVGGPLVSAYATLHPLLLSAGTLNPPGQHTGTTSITATGDCTRRQQTRPNSASSGPRLLHPRGSGPDGVPSSLFTFQPRTTPKKYPQEKKRAGGDSASTSSAP-------------VAGEENVLRAGLMDESDLPDVSALLVEVFEPGVVLADGEFTGLESVILGAPIDMTNNYMKAVAYNEILYSLRSRCGNRLTRGDFDRSSDALVLAVRGPPSTSGKSSSTPVTQDGDADGGVGXXXXAAELVAVVELTIRKPDGSLPLNWPFPAPWRREARDLIVPLLYIEKPPEQWQPYMCNLAVAEEYRGNGYGKQLVRLCEHVAKNSWGYERMYLHVDLGDPAATGLYSSMGYEGIEKYDAPLWMRKLFGWPTIRYQVKRFKGRK 372
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A6H5KVK2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK2_9PHAE) HSP 1 Score: 261 bits (667), Expect = 2.720e-76 Identity = 175/412 (42.48%), Postives = 215/412 (52.18%), Query Frame = 3
Query: 219 LLLHLGVPLTLAS-APPFAVQPNRGSLP----CAGPPNFVTH---------------FHRHRRTRSVRSSPNAPRLHPVDSAPEGVPSSLFTFRPK--SPYAR-------NTESNDNSXXXXXXXXXXXXXXXXXXXAVGVETLHAGLVEESDLGGVSELLVEVFQPGVVLADGDFSDLEAIVVGAPLEMTNRYMKAVAYN-----------------------EIFYSLKSRCGKRLERGDFSLTNNAVVLAVRDQ---------AAPAESGGXXXXXEG-----EVIAVVELTLRKPDGTLPTNWPFPVPWRSAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLWMRKLLSLPTIRYQVKQFKGR 1256
+LL+LG PL +S A +A P+ G LP A N +T R S S P LHP S PEGVPSSLFTF+P +P R TE NS + E LH LVEESDL VS LL EVF+P +++ D ++L + LE N+Y+K +AY +I S+KSRCGKRL RGDF+LT++A+VLAVRD +A E GG G +++AVVEL LR+PDG P N PF P WEPYMCNLAVAE++RG GYGKQLVRLCE +AK HWGYERM+LHVD PAAT LYSS+GY+ MEQ+ P W++KLL L I YQVK F +
Sbjct: 1 MLLNLGGPLLASSHAALYASVPSYGRLPPGVESAARMNAITQQRLGSSXXXXXXXXXXXXXXRPSSASSGPRL--LHPSGSGPEGVPSSLFTFQPPRATPIERPTEVAPGTTEGGHNSGSEDGAGRSAAAVITKAVASADEEALHVKLVEESDLPDVSALLAEVFEPNILI---DPAELRSESSVERLEKANKYLKEMAYKKVGGTHPREERECPLVVWSDTSCQILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDAGGGDAGDIVAVVELCLRQPDGWFPINGPF-------VPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVKHFNAK 400
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: D7FVP3_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP3_ECTSI) HSP 1 Score: 210 bits (534), Expect = 5.950e-60 Identity = 108/192 (56.25%), Postives = 130/192 (67.71%), Query Frame = 3
Query: 723 VAYNEIFYSLKSRCGKRLERGDFSLTNNAVVLAVRDQ---------AAPAESGGXXXXX-----EGEVIAVVELTLRKPDGTLPTNWPFPVPWRSAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLWMRKLLSLPTIRYQVKQFKGR 1256
+AY +I S+KSRCGKRL RGDF+LT++A+VLAVRD +A E GG G+++AVVEL LR+PDG LP N PF P WEPYMCNLAV E++RG GYGKQLVRLCE +AK HWGYERM+LHVD PAAT LYSS+GY+ MEQ+ P W++KLL L I YQVK F +
Sbjct: 1 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDGGGGDAGDIVAVVELCLRQPDGWLPINGPF-------VPMTGWEPYMCNLAVTEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVKHFNAK 185
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A836CNC1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC1_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.370e-41 Identity = 90/230 (39.13%), Postives = 130/230 (56.52%), Query Frame = 3
Query: 570 GLVEESDLGGVSELLVEVFQPGVVLA-DGDFSDLEAIVVGAPLEMTNRYMKAVAYNEIFYSLKSRCGKRLERGDFSLTNNAVVLAVRDQAAPAESGGXXXXXEGEVIAVVELTLRKPDGTLPTNWPFPVPWRSAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDT-PLWMRKLLSLPTIRYQVKQFKG 1253
GL+E+ D+ +ELLV F V L+ + F + E V+ P+ + N Y++ +Y EI +K R G++L + +A++L V D + ++IAVVEL LR PDGTLP NWP P + + EPY+CNLAV+ER RG+G GKQLVRL EHI +N W ++LHVD ++ A LY S+GY+ T P W+ LL++P + Y K +G
Sbjct: 30 GLIEDRDVAQAAELLVNCFPFEVSLSTEAGFKEWEVQVLRIPVGLMNAYLRGFSYYEILLGIKLRMGEQLLNPQIDASGSAMILGVADPST------------NQIIAVVELELRIPDGTLPGNWPLPRFIKGQSAESHSEPYLCNLAVSERWRGQGIGKQLVRLSEHIVRNCWAGSCLYLHVDPSNEIALQLYQSMGYRPAAPTHTLPPWLLSLLAVPQVTYFSKSLRG 247
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: B7FSR9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR9_PHATC) HSP 1 Score: 117 bits (292), Expect = 1.370e-24 Identity = 87/258 (33.72%), Postives = 124/258 (48.06%), Query Frame = 3
Query: 555 ETLHAGLVEESDLGGVSELLVEVFQPGVVLADGDFSDLEAIVVGAPLEMTNRYMKAVAYNEIFYSLKSRCGKRLERG-DFSL---------------TNNAVVLAVRDQAAPAESGGXXXXXEGEVIAVVELTLRKPDGTLPTNWPFPVPW-----RSAAP----GKRW----EPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLWMRKLLSLPTIRYQVK 1241
+ L EE+DL VS +V F + D S E +++ +E+ N Y VA+ E+ L+SR R+ G D SL TN+++VL + + A + +VIA VEL L+ D +P F +PW R+AA GK +PY+ NL VAER+RG+G G+ LVR E I+K WGY R++LHVD ++ AA LY GY+ + P W K + I Y VK
Sbjct: 94 DVFELALAEETDLPDVSRFIVTSFGADAIRVSQDMSTFEGMLMRPAVELVNGYSGIVAFAEVLAGLRSRLKTRIANGSDLSLPELKGRSRTEQISEATNDSIVLVLGRRHAGND-------WHIDVIASVELRLQLCDAKIP----FSLPWLDRIERTAASWIGLGKNHARDLQPYLGNLCVAERYRGRGIGRALVRCVEDISKTKWGYSRIYLHVDKDNAAALNLYQEEGYRDVGLRWKPFWAGKAVD---IGYYVK 337
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A7S0AJY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AJY5_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.110e-22 Identity = 73/228 (32.02%), Postives = 108/228 (47.37%), Query Frame = 3
Query: 570 GLVEESDLGGVSELLVEVFQPGVVLADGDFSDLEAIVVGAPLEMTNRYMKAVAYNEIFYSLKSRCGKRLERGDFS-------------------LTNNAVVLAVRDQAAPAESGGXXXXXEGEVIAVVELTLRKPDGTLPTNWPF--PVPWRSA--------APGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYK 1166
G+ EE DL +S L ++ F + GD S E ++ + + N Y AY E+ L+SR +LE+ D + N++++LA+ E G + IA VEL L+ D +P + P+ V R+A A +PY+ NL VAE RG+ GK LVR E IA + WGYE+++LHVD+ + AA LY S GY+
Sbjct: 68 GIAEEDDLPDISRLTIDAFGDVAITLGGDLSSFERAILSPGVALWNGYTGYAAYTEVLSGLRSRMKDKLEKVDLASPLVAKDGVDMPEEDSEQLAANSSLILALGRPKPEGEPGTI------DAIATVELRLQPTDAKIPFSQPWVDSVERRAAKALGVDGPARDDTLQPYLSNLCVAESARGRRIGKALVRCLERIACDTWGYEKIYLHVDLENAAAYNLYKSEGYQ 289
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A448ZI05_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI05_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.350e-21 Identity = 74/245 (30.20%), Postives = 107/245 (43.67%), Query Frame = 3
Query: 549 GVETLHAGLVEESDLGGVSELLVEVFQPGVVLADGDFSDLEAIVVGAPLEMTNRYMKAVAYNEIFYSLKSRCGKRLERGDFSLTNNAVVL---AVRDQAAPAESGGXXXXXEG---------EVIAVVELTLRKPDGTLPTNWPFPVPWR-----------------SAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLW 1196
G + GLVEE +L + + ++ F + D + E +++ E N Y VA+ E+F K R R + + +A L + +Q AE EVIA +EL L+ D +P F +PW + A +PY+ NL V E+ RG+ G+ LVR E+IAKN WGY RM+LHVD ++PAA LY S GY + P W
Sbjct: 82 GSDRYELGLVEEEELPDLCKFIITAFGAEAIQLASDMNSFERMLLNPAAEFLNGYSGLVAFAEVFSGTKQRLADRFQENPSLVDISAPDLKGLSREEQIRKAERDSLVLILGKPSNDASRSIEVIASIELRLQPCDAKIP----FSIPWLDRVERRIGSLIGLGNNGNGAGTNDMQPYLSNLCVDEKFRGQKIGRGLVRCVENIAKNSWGYNRMYLHVDEDNPAALNLYKSEGYSDVGHRWNPFW 322
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A7S2GAU2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAU2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.230e-17 Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 3
Query: 888 AVVELTLRKPDGTLPTNWPFPVPWRSAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVD--MNDPAATGLYSSLGYKSMEQYDT-PLWMRKLLSLPTIRYQVKQF 1247
A E+ P LP+N P P WR K PY+CN+AVAE R K G L+RLCE IA+ HW ++ ++LHVD +D AA LY+SLGY+++ + + P + + L +P++ KQ
Sbjct: 1 ATAEIAFEIPQNRLPSNTPNP--WRPDPVLKDLRPYVCNVAVAEAARRKKIGTNLLRLCEQIARRHWDFDEIYLHVDPSKDDAAALKLYTSLGYENVPELNICPGPLDRALGMPSLISMKKQL 121
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A835Y6U3_9CHLO (N-acetyltransferase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y6U3_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 1.220e-6 Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 3
Query: 831 QAAPAESGGXXXXXEGEVIAVVELTLRKPDGTLPTNWPFPVPWRSAAPGKRWEPYMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQ 1178
+AA SGG +A L++ + + LP +P P+R Y+ N+AV R +G +QL+R CE A+ WG+ + LHV+ + AA LYSS+G++ +E+
Sbjct: 17 EAASTSSGGGRA-----AVACAALSMLQVEALLPPPFPSNKPFRL---------YVSNMAVVPDFRRRGLARQLLRACERQARL-WGHSSLWLHVNKTNLAAIALYSSMGFRPVEE 117
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Match: A0A803P254_CANSA (N-acetyltransferase domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803P254_CANSA) HSP 1 Score: 59.7 bits (143), Expect = 6.820e-6 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 3
Query: 993 YMCNLAVAERHRGKGYGKQLVRLCEHIAKNHWGYERMHLHVDMNDPAATGLYSSLGYKSMEQYDTPLWMRKLLSLPTIRY 1232
Y+ N+AV E+ R KG KQLV E A+ WG + LH D+N+P AT LY S G++S++ D W + S P +++
Sbjct: 211 YISNVAVREKFRRKGIAKQLVAKAESHAQR-WGCRAIALHCDLNNPGATKLYKSQGFRSIKVPDGAAWPQPKTS-PDVKF 288 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1008.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig1008.82.1 >prot_S-latissima_F_contig1008.82.1 ID=prot_S-latissima_F_contig1008.82.1|Name=mRNA_S-latissima_F_contig1008.82.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=361bp MLLLHLGVPLTLASAPPFAVQPNRGSLPCAGPPNFVTHFHRHRRTRSVRSback to top mRNA from alignment at S-latissima_F_contig1008:42901..52517+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig1008.82.1 ID=mRNA_S-latissima_F_contig1008.82.1|Name=mRNA_S-latissima_F_contig1008.82.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=9617bp|location=Sequence derived from alignment at S-latissima_F_contig1008:42901..52517+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig1008:42901..52517+ >mRNA_S-latissima_F_contig1008.82.1 ID=mRNA_S-latissima_F_contig1008.82.1|Name=mRNA_S-latissima_F_contig1008.82.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=2166bp|location=Sequence derived from alignment at S-latissima_F_contig1008:42901..52517+ (Saccharina latissima SLPER63f female)back to top |