mRNA_S-latissima_F_contig1006.72.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1006.72.1
Unique NamemRNA_S-latissima_F_contig1006.72.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A6H5KTK2_9PHAE (VOC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK2_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 6.260e-76
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 3 
Query:   66 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLK A SEAACSVGYSPLLCFDVPDM HAVQRAL MGGHLDGPIKYPAHGA+AS+RSPDGHMVGLFQP+DQEGL
Sbjct:    1 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKMAASEAACSVGYSPLLCFDVPDMDHAVQRALGMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 120
[Close]
BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: W7TYR3_9STRA (VOC domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR3_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.590e-43
Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 3 
Query:   75 RSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQ 416
            R+V+L++RD+   V FYG+ GLGLAL   SD  AEF+TGGTPLVLK A  EA CS GYSPLLCFDV DM   + R L++G  LDGPIKYP +G +  +RSPDGHM+GLF+P  Q
Sbjct:    9 RNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPSIQ 122
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A8K1CQB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQB9_PYTOL)

HSP 1 Score: 133 bits (334), Expect = 7.790e-37
Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = 3 
Query:   66 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFET-GGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            MR R V++L RD+ +  QFY EG LGL L  SSDT AEF+T    PL +K A SEAACS GYSP L FD+ D+  AV R L +G  +DGPIKYPAHG +A++RSPDG M+GL++P   E +
Sbjct:    1 MRLRQVLVLSRDLARSTQFYQEG-LGLKLLRSSDTFAEFDTRSSVPLCVKLAQSEAACSTGYSPFLNFDIQDLSEAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENV 120
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: D0NG00_PHYIT (VOC domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NG00_PHYIT)

HSP 1 Score: 133 bits (334), Expect = 8.020e-37
Identity = 68/120 (56.67%), Postives = 86/120 (71.67%), Query Frame = 3 
Query:   69 RARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFET-GGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            R R +++L RD+ +  QFY EG LGL L  SSDT AEF+T  G PL +K A SEAACS GYSP L FD+PD+  AV R L +G  +DGPIKYPAHG +A++RSPDG M+GL++P   E +
Sbjct:    3 RLRQLMVLSRDLARSKQFYQEG-LGLKLLRSSDTYAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDIPDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENV 121
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: K3WVE3_GLOUD (VOC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVE3_GLOUD)

HSP 1 Score: 129 bits (325), Expect = 1.790e-35
Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 3 
Query:   66 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFET-GGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            MR R V++L RD+ +  +F+ EG LGL L  SSDT AEF+   G PL +K A +EAACS GYSP L FD+ D+   V R L MG  +DGPIKYPAHG +A++RSPDG M+GL++P   E +
Sbjct:    1 MRLRQVLILSRDLARSTRFFQEG-LGLKLLRSSDTFAEFDIKAGVPLCIKLAQNEAACSTGYSPFLNFDIQDLSDTVPRLLMMGAIMDGPIKYPAHGKVAAIRSPDGVMIGLYEPNSWENV 120
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A5D6XRH0_9STRA (VOC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRH0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.050e-34
Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 3 
Query:   66 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFET-GGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            MR R V++L RDV +  QF+ EG LGL L  +SDT AEF+T  G  L +K A +EAACS GYSP L FD  D+   + R L +G  +DGPIKYPAHG +A+VRSPDG M+GL++P   + +
Sbjct:    1 MRLRQVLILSRDVARSTQFFQEG-LGLKLLRASDTFAEFDTQSGAALCIKLAQNEAACSAGYSPFLNFDTQDLSDTIPRLLMLGAIMDGPIKYPAHGKVAAVRSPDGVMIGLYEPNSWDNV 120
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: D8LGD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 3.270e-34
Identity = 62/80 (77.50%), Postives = 66/80 (82.50%), Query Frame = 3 
Query:  195 TPLVLKAAPSEAACSV---GYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            TP     AP+   CSV    YSPLLCFDVPDM HAVQRAL MGGHLDGPIKYPAHGA+AS+RSPDGHMVGLFQP+DQEGL
Sbjct:    2 TPPPFHPAPA-CECSVLLSRYSPLLCFDVPDMDHAVQRALGMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 80
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A7S2RR76_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR76_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.750e-34
Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 3 
Query:   66 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETG---GTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQ 404
            +R R V++L RDVG+ + FYG  GLGL ++ +SD+ AEF+ G   GT   L+    EA CS GYSP+L FDV DM   + R + +GG LDGPIKYP HG +AS+RSP+G M+GLF+
Sbjct:    2 IRFRRVLVLTRDVGECLNFYGSEGLGLRVRFASDSYAEFDCGDKHGTTFALQKVEREAECSTGYSPMLHFDVEDMDSLIGRLIMLGGRLDGPIKYPVHGKLASLRSPNGQMIGLFE 117
[Close]
BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A6A5BKG1_NAEFO (VOC domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BKG1_NAEFO)

HSP 1 Score: 125 bits (313), Expect = 1.310e-33
Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 3 
Query:   75 RSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQ 404
            ++++LLI+DV K V+FY EG LG+ + H S+  AE ++G   + L     EAAC+ GYSP LCFDV  M   + + +EMG  LDGPIKYP+HG +AS+RSPDGHM+GLF+
Sbjct:    9 KNIMLLIKDVPKSVKFYSEG-LGMQVNHVSEHWAELQSGQMKVCLNKVEGEAACTTGYSPFLCFDVTQMDKTIYKLIEMGAVLDGPIKYPSHGKVASLRSPDGHMLGLFE 117
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BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Match: A0A484DRS8_BRELC (VOC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRS8_BRELC)

HSP 1 Score: 124 bits (310), Expect = 5.320e-33
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 3 
Query:   69 RARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFET-GGTPLVLKAAPSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMASVRSPDGHMVGLFQPEDQEGL 425
            R R V++L RD+ +  QFY E GLGL L  SS+T AE++   G PL +K A SEAACS GYSP L FD+ D+  AV R L MG  +DGPIKYP HG +A++RSPDG M+GL++P   + +
Sbjct:   18 RLRQVLVLSRDLARSKQFY-EKGLGLKLLRSSETYAEYDIRAGVPLCIKLAQSEAACSSGYSPFLNFDIRDLCEAVPRMLMMGAIMDGPIKYPVHGKVAALRSPDGVMIGLYEPNSWDNV 136
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1006.72.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTK2_9PHAE6.260e-7694.17VOC domain-containing protein n=1 Tax=Ectocarpus s... [more]
W7TYR3_9STRA2.590e-4361.40VOC domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A8K1CQB9_PYTOL7.790e-3756.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0NG00_PHYIT8.020e-3756.67VOC domain-containing protein n=21 Tax=Peronospora... [more]
K3WVE3_GLOUD1.790e-3553.72VOC domain-containing protein n=1 Tax=Globisporang... [more]
A0A5D6XRH0_9STRA2.050e-3452.89VOC domain-containing protein n=1 Tax=Pythium bras... [more]
D8LGD4_ECTSI3.270e-3477.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RR76_9STRA8.750e-3452.59Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6A5BKG1_NAEFO1.310e-3352.73VOC domain-containing protein n=2 Tax=Naegleria Ta... [more]
A0A484DRS8_BRELC5.320e-3353.33VOC domain-containing protein n=1 Tax=Bremia lactu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1006contigS-latissima_F_contig1006:141046..148725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.6
Seed ortholog evalue1.6e-29
Seed eggNOG ortholog4787.PITG_11022T0
Hectar predicted targeting categoryother localisation
EggNOG OGs2CF1K@1,2RZ76@2759,3QFWZ@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size560
Cds size363
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1006.72.1prot_S-latissima_F_contig1006.72.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1006 141178..148660 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815365.8892367-UTR-S-latissima_F_contig1006:141045..1411771622815365.8892367-UTR-S-latissima_F_contig1006:141045..141177Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1006 141046..141177 -
1693924834.5068398-UTR-S-latissima_F_contig1006:141045..1411771693924834.5068398-UTR-S-latissima_F_contig1006:141045..141177Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1006 141046..141177 -
1622815365.927566-UTR-S-latissima_F_contig1006:148660..1487251622815365.927566-UTR-S-latissima_F_contig1006:148660..148725Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1006 148661..148725 -
1693924834.5509126-UTR-S-latissima_F_contig1006:148660..1487251693924834.5509126-UTR-S-latissima_F_contig1006:148660..148725Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1006 148661..148725 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815365.9020436-CDS-S-latissima_F_contig1006:141177..1413611622815365.9020436-CDS-S-latissima_F_contig1006:141177..141361Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1006 141178..141361 -
1693924834.5183396-CDS-S-latissima_F_contig1006:141177..1413611693924834.5183396-CDS-S-latissima_F_contig1006:141177..141361Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1006 141178..141361 -
1622815365.914005-CDS-S-latissima_F_contig1006:148481..1486601622815365.914005-CDS-S-latissima_F_contig1006:148481..148660Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1006 148482..148660 -
1693924834.5312824-CDS-S-latissima_F_contig1006:148481..1486601693924834.5312824-CDS-S-latissima_F_contig1006:148481..148660Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1006 148482..148660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1006.72.1

>prot_S-latissima_F_contig1006.72.1 ID=prot_S-latissima_F_contig1006.72.1|Name=mRNA_S-latissima_F_contig1006.72.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=121bp
MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKA
APSEAACSVGYSPLLCFDVPDMHHAVQRALEMGGHLDGPIKYPAHGAMAS
VRSPDGHMVGLFQPEDQEGL*
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mRNA from alignment at S-latissima_F_contig1006:141046..148725-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1006.72.1 ID=mRNA_S-latissima_F_contig1006.72.1|Name=mRNA_S-latissima_F_contig1006.72.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=7680bp|location=Sequence derived from alignment at S-latissima_F_contig1006:141046..148725- (Saccharina latissima SLPER63f female)
CTGTGCTGTACGTTCCGGGTTGCTAGAGCTGAGCGGTGCGGTGGACACGG
CATCTCTTAGCTGGCATGCGAGCGAGAAGTGTTATCTTGCTGATACGGGA
TGTGGGGAAGGGAGTCCAATTCTACGGCGAGGGTGGCTTGGGCCTGGCTT
TGAAGCATAGCTCTGATACGATGGCCGAGTTTGAAACAGGAGGAACCCCG
CTTGTTCTCAAGGCGGCTCCGTCTGAAGCAGCTTGCTCTGTTGGGTGAGC
TTCGCTTGAGTGCCCGAGGCACGAGGTTGTTGGGTGTTGTCCGCATTACC
CAATGTTGGCGAGGATAGCGTGCAAGAGGATTGACATCGTCTGTTTGTGG
TGCAAGTTACGTTTTCTGCTGTATGTAGAAGTCCTCAAGTGAGAGTGACA
GATGCTCCGAGTATACTCGATACTCCGAGTATACTCGGAGTATCGAGTAT
TTTTCGTACTCCGAGTACTGAGAGTATTAGAGTACTGGTGGCCTAAATAC
TCGGAGTACTTGGAGTATGAGCAGTACTGAAGGCCCAAATACTCCGAGCA
CTGGGAGTATGAGCAGTACTTATACTCGAGTACAAGCAGGAATCAGAGTA
AAAACATCTAAATTACTCGGAGCACTCCGAGTATCTAGAGTATTGAACAC
CGAAATACTGCGAGTACACAAAGTACCTGAAGTATTTTTTCTCTAAAATA
CTCTAATTATACTTCCAGGTAATGGGAGCATCTGTGAATTTTGAAATGCT
ATAAACGCAGTCACATGCTCCCAAAACCTGGGAGGAATGACGGCCGAGTC
TTTAAAGTGATGCAATGATGCTCCTAACGTACTTCACACTCCGAGTATAC
TCCGAGTATCGAGTACATTTCGTACTCCGAGTACTTAAGAGTATTAGAGT
ACTGGCGGCCTGAATACTGGGAGTACTTGGAGTATGAGCAGTACTGAAGC
CCCAAATACTCTGAGTACGAGGAGTACCCGCAGTATCGGACCCCGAAATA
CTCCGAGTACAAGCAGTATCGAGAGTGTTCATACTCAAAATACTCCGAGT
ACGAGCAGTATCCCGGAGTATCGAACCCCGAAATACTCCGAGTACACGAA
GTACCTGAACTATTTTATCTCCAATACTCCTTACTTTCCTCCAAGGTACT
CGGAGCATCTGTGCAACCTACCAAGTACTACCCTGGTACAGCAGTACGTA
GTCTCAATGTTGATATACCTGGTACAGCAGTACGTAGTCTCAATGTTGAT
ATACGAGTACTCGTATACAGTATCGGTACGGTACGGCTGTATATGTTTCG
GCACGAAGGCCAAGCGCATTATATTATATGTCAATTGCCAATGGTGCCAC
TCGTTGCTGAGAGCGCCTTCGTGGCGTGGGTAGGCGGAATCCGACGCAAG
TCGGCGAGGGAAGAAAGCGCTGAAATCTTCTCGCGATAAAAATTCAAGGC
AAGAACCGTCGTAGCGAGGGAGGAGGGAGAAGAGCCTACTTTGTGACCCC
GGATCTGAGTTACGACTAGGAAGGAGAGAGAAGGAAGGGCGAAGATAATA
AATGGGATGGACAAAAAAAAAAAAAACTCGTCAAGCTGCTCTGGTTTCAA
GCGCATCATTTTTTTACCTGCTACTACAAGTATATACGACTGCTGTCTTG
TGTCGTGTACGTCCTCGGTCAGCGTACGTAATCGTCGTATGATAGACCCT
TGTAGCCAACAGCACTCACTCCCGCTGCTCTGCTGCTGCTCTGCTTCTGC
TCTGCTGTGCTCTGCTGTGCTCTGCTCTGCTGCTGTACTGCTCTGCGTCA
TTCCGACGTGTCGCGGCATGACAGCACGTGAAGTGTCTTCCAAGCATGAC
GCGTAAATGATTGTGGCTGTGCCTTTCGACTACAGTACTGCAGCATGACC
TCTGATACTTGGCACCGGTATACGCGTAAATGATTGTGGCTGTGCCTTTC
GACTACAGTACTGCAGCATGACCTCTGATACTTGGCACCGGTATGTACGG
AGAAGGGATTATGGAGAAGTGATTATGGTGTATATTAAACGAAAGCACGT
TCCGGTGTCGACTTACTCATGATACGTACAAGCACGAGTCCTCCGGATAA
AAAAAAATAGATACGTAATAACCGCTATTAATGGTCGACCTGCGGTTTTC
TGGGATCCTTACAAAGGCACAATCCGGGTGTCAGCCGCAGGTCTACTATT
AATAGCGGTTGCCTCTTTTTTCCGTCCGGAGGACTACTGTCGTAGTGAGC
TTCAAGTCGACCCCGGATTGTGTCTTCGTTAGATAAGCACCATAACCACT
GAGCTTTTAAGTCAGCGCTGACGATTGTGCTTCTGTTAGATATATGCCCG
TCGGCCCTGGCTCGTGGACAGGTGATTATGGTGCATGTCTAACGGCGCGG
CTGACTTATGGACAAGTGGTTGTGGTGCATACCTAACAGCGCGCACTGCT
GCACTGCCATATGTAGTATACTGTATAGCTCGGGAAAGGACGACACCAGC
GAACAGCCAACGGAGGGGGCACACACGCAGCATGCCATAAAAGCTTCAAA
GAGCACCCTGAGGGGGGTTTCCTAGAGAGCATCCGTACACTCAGACTCGT
ATATATATGCGTGTTGGATGCCCTCTTTGGTGCGATGGGGCTGGCCGGAT
TCGATACGTACTCGCACGATGTGTATTAGGACTTCAGAGGCGGGGGGAAA
TAAAAAACAAAATGCCGAAACAAAATGCCCATTACAGCATCGCCCACACC
TATTTAATAGTACTATTACGGGGGGCCATAGTAAATACTAGTAAATAGGA
CCAAATATTGTTGGTAAAAATAGGGAAATATGTAGGTTTTTGTGTGTACC
CGTAGGTCCTATTTACTATGGTCACCCGTAATAGTAATAGTAATAGTACA
CTCAGCCATTGGCTGCCCGCGTAGGGTACCAGGTACCAGGTATGTGTTTT
CGAGGTGCAAAACGAGTATGTATACGGAAGGAGCTGTGAGGCGCACGCGC
ATCATGATGGCACTGGTAAGGCTGCATGCTCCTCCTAGGCGCTTGATTAA
GAGCGCACATTGTCGATTTTCAGGTCGCTGTGCCTGGGCCCCAAAGCCGT
GAGCTAGAAAAACCTCTCGGAAGTCGTATTTGCAAGCTGCGTGTGATACG
GCGATGGCCCTGCGACGGTGTGTGTGTACCTGGTATGATACGACGGTAAA
TACTGCCGTAATTTCAGTCACAACATGATAACTTTACGGCATATCTGGAT
GGACACGACTGTTGTCCCTACTGTACGTATTTTTTGGGCCGTTACGCAAC
CACCTCGTTTAATCTCGTACGCCGAGTACGATCAACACCCAGTATGTTTT
ACTGCGCGATACCGTACAAAAACGAAACAAAACAGCCTATTCCCTGAGAT
CGAAGTTTGGCAGGATTCCGAGAGGTTGCCTAGCAGCTCCAAGAAAAACA
TTGGGCGCATGCATGGTATACTACTTGTACGGCCGCGCGCTCGCTCATGC
TGTTTATTTGACACACACGGTTTTCCTACATCATCATCCACTACTGTAGT
CGACGAGGGAAGAAAGGGATACAGTAGTAACTATTCTCGCGATAAAAATG
CCAGGTATGAACCGCAGTGGGGAGGAGGGAGAAGAGCCTCTGCTTTGTGA
CCCACCGTTAATGTGACTCACTGCGTACGAGTGCTGCTGCCCGATGGCGT
CGTCGACGTTTCTTCGAGGTCGAGAGCAACAAACCCGTGCGCTCCAACAC
AGCATCGCTTGCATGCCGCCGCCGTGGGCCCTGCCCATATCGAGGCCTGT
CTCGTGGAAAAGCCGGTGTTGCCTGCTGTTTGGTGCGCTCGGGATGGCTC
GCTCGACGAGTGCAGTCTCTCTGGTTCGTGCGCCCTCTCCTCTCGTGTCC
ACGGACTTAGGGTTTCGGTTGCAGTTGCGCTCGCGCTTCGACCATGCTCA
CGGGGCCTCCGCTACCACTACCACCACCCCCACCACCACCACCACCACCA
CCACCACCACCACCACCACCACCGTCGAACGATACAGCAGCTCAAGCATG
TCAAATCCGCAACGACGATATATAACCTGAAAGCGGCGACGATGTGCGTA
TCCGACCCATGCTCAAGATAAAGGTGCACCATTTGTTTTCTGAAGTTCCA
AAAACAGACTTTGGAGGGAAACGAAAGTGAAAGTTCAACCATTCCATGGC
CCATGTATACTAAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAG
TCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATAC
AAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGT
CATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACA
AAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTC
ATACAAAAGTCGTACAAAAGTCGTACAAAAGTCGTACAAAAGTCATACAA
AAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCA
TACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAA
AGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCATACAAAAGTCGT
ACAAAAGTCATACAAAAGTCATACAAAAGTCATACGTACGAGTATATGGC
GACAACAAGAATGATCTTCTGACGATTTTGGGTTATAACCCATTTAGAAC
TGAAAAAACTGTCCCACACTAATTCCAAGTAGTTTGTCCCCAAATATGTG
GGACCAGTTCTTAAGGGGGGTTAAGGAGCGCCGTCATTCAGAAAGTGTTT
TAGCCAAAAAACGGTATACCCTACACCTCTATGGTCATCCCACGAAAAAA
AAAAAAAACATAATTGTGACGTCACAGCTAAACGAATCGGCAACGATGCA
TGCGCCCGTAAAACCACCCAAAAAATTGTACGGTGGCATCTCAGCTAGTC
ATACGCGAGATGCATTCATCGGACGACGCCCTCAACGCGCGCGTGTGTAT
ATTTGGTGAGTCCCGGGCAGCGCTTCCCTCGAACATCGCCGGTCTTGTCG
CGCACAACGGCCACGTCACCGCGGACGCCCATCAAAAACCCGCTCGCGCC
CCCCTCCGGGCTCGCTGCGAAAGGAAGGGCCATGTGTGTGTGAAAAAACG
CAGGCCGCTCTCCGTCTCGCGGGGAAACGAGCTGCTGTGACGCCAACAAG
GTAATCCTCTTTGCTGCCTCTTTTGGTCGACCGAGATGCCATGTTCCAGT
CCGCATGTGTCCGTGAGAATAATCTGCTTTCTTCTCGTCATACTATAGCA
TTGCTTAATCTGACAGCAGCAACGCTCAAACATGGTGTCGCCCCGGGAAG
CGCGCACACTTTGAAACTTGGAGCGTCGATCGGATAACCCCTGGCCCCTC
TTGCTCTTGACGCCTCCGGCGTGGCTGCTGCAATCGTTATGTTTACGTTT
TTTTGTTCCGCTGGCCGGTGGCCGGTTTCTTTCCTCTACAACATCTCAGT
GTGTAAATGTATGTTCGGCGATGCTCTTGTTTGTTCCATTCCGCGCCCTG
AGGGCAGCAGCAGCAGCAGCAACAACTCGCTCGTGGTTATGTTTTGCACG
GTAGTGAAAGTCTGTAAGCGGGAATAATCTTAATGGCGGAGGTGAGGGGA
GGGGGAGGGAGAGGGGGGGGGGGGGGGGGGGAGTCCCTTCGTAGGTCTCG
CGCTTTTCCCCTACCGGTATGAGAAGCAGAAGCATGACTATACGACCACT
GCAATACAGCTCCCTCTGTAGCGCCGGTTGAGTAGCGCCGGCTGCCCGCT
CTAGCGCCGGTGAAATCGCTTGGCACAGTATTCCGTTTCCATACCAAAAC
CTATATATATATATATATATATTCCCCAATCCGGAGTAGCGCCGGTTTTT
CCCGCTGGCGCATACCGGCGCTATAGAGGGACCACTACGCTATACCGGTA
GGTAATTAGACCGCCTTCCTTGCGGCGATTCAAGTAGAGGCGGCCGGCAG
TCGTTGCCACTGCGGGATACGCTCGGTAGTAGAGGTCAGGCGATGCTCGT
TTTTTACAGACCGCATTCGCTATTGACCGGATTCGCAATATAGATGTAGG
GTATTCCCAAACCGGGCGAGCGTACACTTCAAGTGGGGTGCGAAGACATG
GTGGGGGGGGGAGGCCAGCAGCGCAACAGCGAGCGTGCTGGGGGGTTTTT
TTGTGACTGCGGTACAGCGTGACTATGTTACGGTACATATTACGGGGTGG
GCTAATGTAGTAAATACGGGACCTAAGGTACACACAAAAAAAAAAAACTT
ACGATATATTTACCTATTTTTTTCCAACACTATTTGGTCCTATTTACTAT
GGTCCTCCGTAACAGTAGAGCAGTAGAGCAGTAGAGCAGTAGAATGGCGT
GTTGTTGGAAAATGTTTGGAATCGGGTATGTGGGGTAGTTGCGGAGCTCA
CCATGTGTGCCACCGCTGTGTGCGGCGGCACAACCGTAATGTATTAACAG
TACGCGACGCGTTTGGACAACCTACCGCTAAGAGAGATATGGCAATAGCT
TGTTCCAGGAGTAGGCGTGAATGCGGCGGGGAGCCGGTCGGCCCGACAGC
AACCGCCGCCGTAACCCTTTTTAGAATCCCAAGCTTCTTTTCGGGAGCGA
ACTAGCTGGCATTAAAGTTGGCTTTGAGTATGGCAGAGCAGTAAAATTGG
GAAACCCCGGAAAATGGGATGGCGGGGACGACATTCAGCGTCCTCCGCCT
TAGTGTGTTTTGTTTTTGTTTACGGTGAAGTGGAAGGAGTCCTGTTGAGG
CAGTAATATACGGCATCTCCAACCACGTTTTTGTTTTATGTGTCTCGTGA
AACAATTGCTAAAACACCGGGCATCCCCCCCCCCCTCCCCCCAACTCTCC
TCCTCCCCTTACCTTTCCGCACGCTGTTCGTGTCTCTAGCGTAAGAGTCT
TGCTAGTTTTCGTTTTTGTTTTGGTGGTCTGATCTTGACTCGTCTCCGCC
TGCGATGCCTGGCCTCGCCTTTTGCTACCCCGCGTTTGTGCTACGCTTTG
GCCACTACGTTGCATTGTATTGACACGGTCGCCCCCCCCCCCCCCCTCCA
AATGTTGGAGGTGTCTGTCTCTGTTAGGAGTGGGAGCGGTGCTCTGTATC
GAAAGGGATGCGTTGCCAATGGTCGAATGTGTCTCTAGTAGGAGTAGGAG
CGGTGCTCTGTCTCGAAAGGGATGCGTGGTCAATGGTCGAATGACTAAGG
CAAGCAACAAATGAGTACGCCCTTCCCCCCCGACCCCCGCCCCCGCCCCC
CCTCCATGCTGCAGGTACTCCCCGCTGTTGTGCTTCGACGTACCGGACAT
GCACCACGCCGTCCAGCGAGCGCTCGAGATGGGCGGTCACCTCGACGGGC
CGATCAAGTACCCTGCGCACGGAGCCATGGCGTCGGTACGAAGCCCGGAC
GGCCACATGGTTGGTCTGTTTCAGCCGGAGGACCAAGAGGGCTTGTGATG
GCTTTTGATGGCTTGTGGCGGAATGGGATGGACGGTCGGTTGGTGGGACG
GTTTGGAATCGCGCACGGGCGGGGAGAGGGCGCGCTGTGTGCGTTGCTGC
ATGTACGATAGTCGCTATGTTTCGAGGGGC
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Coding sequence (CDS) from alignment at S-latissima_F_contig1006:141046..148725-

>mRNA_S-latissima_F_contig1006.72.1 ID=mRNA_S-latissima_F_contig1006.72.1|Name=mRNA_S-latissima_F_contig1006.72.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=726bp|location=Sequence derived from alignment at S-latissima_F_contig1006:141046..148725- (Saccharina latissima SLPER63f female)
ATGCGAGCGAGAAGTGTTATCTTGCTGATACGGGATGTGGGGAAGGGAGT
CCAATTCTACGGCGAGGGTGGCTTGGGCCTGGCTTTGAAGCATAGCTCTG
ATACGATGGCCGAGTTTGAAACAGGAGGAACCCCGCTTGTTCTCAAGGCG
GCTCCGTCTGAAGCAGCTTGCTCTGTTGGATGCGAGCGAGAAGTGTTATC
TTGCTGATACGGGATGTGGGGAAGGGAGTCCAATTCTACGGCGAGGGTGG
CTTGGGCCTGGCTTTGAAGCATAGCTCTGATACGATGGCCGAGTTTGAAA
CAGGAGGAACCCCGCTTGTTCTCAAGGCGGCTCCGTCTGAAGCAGCTTGC
TCTGTTGGGTACTCCCCGCTGTTGTGCTTCGACGTACCGGACATGCACCA
CGCCGTCCAGCGAGCGCTCGAGATGGGCGGTCACCTCGACGGGCCGATCA
AGTACCCTGCGCACGGAGCCATGGCGTCGGTACGAAGCCCGGACGGCCAC
ATGGTTGGTCTGTTTCAGCCGGAGGACCAAGAGGGCTTGTGAGTACTCCC
CGCTGTTGTGCTTCGACGTACCGGACATGCACCACGCCGTCCAGCGAGCG
CTCGAGATGGGCGGTCACCTCGACGGGCCGATCAAGTACCCTGCGCACGG
AGCCATGGCGTCGGTACGAAGCCCGGACGGCCACATGGTTGGTCTGTTTC
AGCCGGAGGACCAAGAGGGCTTGTGA
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