mRNA_S-latissima_F_contig100.40.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: D7FJZ0_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI) HSP 1 Score: 677 bits (1746), Expect = 1.330e-235 Identity = 351/437 (80.32%), Postives = 388/437 (88.79%), Query Frame = 3
Query: 342 PAMEEPAPTTSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRPMFAGTGTLNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWRKAEVGANYVVAGLGVALALLGGGLSIKKSFF 1652
P A ++SSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSR AVVPTVAMIV LG MSGYCFSLIGRVCA+TGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSII+GDVF++V AFGAP +++ARTN LCLVS+ +LLPLCLLKDLSALSYTSI+GVLGTVYTA VMGIRYFD SYVEGGRFF+GLA+ RP+F+GTG +N ALIL+SMLSTAF+AHFNAPKFYAELKDKSV R FNTVV SSFAAA+ LVVIMTLFP+LTFGGASKSFILNN+AT+DRLATSCR+AIA+SIVGGYPLVFM AKTGA++ G NPTE QRKVGT+LLL FTAIGV LTDLGFVVSFGGAVLGSALVFIFPT+MWIA+ K+DAK G P+KGWR+AE+ NYV++ LGVALA+LGGGLSIKKSFF
Sbjct: 52 PGQAPQAESSSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAFGAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARPVFSGTGAMNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPR----------FNTVVGSSFAAAIGLVVIMTLFPYLTFGGASKSFILNNFATSDRLATSCRLAIASSIVGGYPLVFMGAKTGALAAVGISNPTENQRKVGTTLLLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIAQSKKDAKWGKPLKGWRRAEIMGNYVISALGVALAVLGGGLSIKKSFF 478
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 446 bits (1146), Expect = 3.900e-146 Identity = 225/396 (56.82%), Postives = 288/396 (72.73%), Query Frame = 3
Query: 387 VGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGR-PMFAGTGTLNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWRKAEV 1571
VG SIFNL+KN+VG+GILA+PGGV AFS +RGAVVP +I+ LG +SGYCFSLIGR CA+T A SYGDAW+ T+ KT W+P SS AKTFF C++YSII+GD F+ + + F APA ++ R L +S LLPLCL+ DLS L YTSI+G+ GT+YTA VM +RYFD SY GGRFF+ A + + P+F G+ LNPL+LIL+SMLST+FIAH+NAPKFY ELKDK+V + +NTVV +SF A++ L V+MT+FPFLTFGG S ILNNYA D LAT CR+AI SIV GYPL F+ + G S G PT+TQ +V T +L+A T + L +LGFVV+FGGA+LGSA++++FP +MW+ KCK D K G+ + GWRK +
Sbjct: 29 VGGSIFNLVKNIVGSGILALPGGVAAFSHARGAVVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTSIVGIAGTLYTAGVMALRYFDGSYALGGRFFNAAASAAKGPLFTGSAALNPLSLILVSMLSTSFIAHYNAPKFYHELKDKTVPK----------YNTVVGTSFGASILLFVVMTVFPFLTFGGHSSGLILNNYANGDNLATMCRLAIGASIVFGYPLTFITTREGVFSALGVTKPTKTQIRVATVAILSALTGCAMVLRNLGFVVAFGGALLGSAIIYVFPAVMWVGKCKGDMKRGDKLTGWRKVNL 414
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 367 bits (942), Expect = 2.470e-114 Identity = 210/463 (45.36%), Postives = 302/463 (65.23%), Query Frame = 3
Query: 279 PTARGAVVMVAAEVSGGAASIPAMEEPAPTTSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRPMFAGTGTLNPLA-LILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSL-LLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIA----KCKQDAKNGNPVKGWRKAEVGANYVVAGLGVALALLGGGLSIKKSF 1649
P +R V + +SGG A E + + S+FNL KN++GAG+L++P GV AFS S+ A++P +I LG++S Y F LIGR CA T A SY +W++T+G++++W+P +C A F C+A++II+GD FS + K FGAPA+++ R+N + VS+T+LLPL LLK+L +L +TS+LG G VYTA++M IR+FD SY GG+F + L +G P+F GT NP+ L+L+SMLSTA+ AHFNAP FY ELKD +V R ++ +V++SF A+V+ + +T F FLTFGGAS +ILNNYATTDRLAT RVA+A+S+V YPL F+ + G + G K P ET+ + ++ LLA TA + LTDLGFV SFGGA++GS +V++FP LM++ K K A G +K E+ N + GVA+ +LG +S+ ++F
Sbjct: 68 PESRAKVPLTVQRMSGGGEGGQAASEEGDKSG----MSASVFNLAKNILGAGMLSLPNGVAAFSDSKKAIIPASLIIAVLGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQRSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGT-NPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPR----------YSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAK-PGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAG-QKREMSLNAGIVAAGVAMGVLGCVISVLETF 513
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 358 bits (918), Expect = 7.380e-111 Identity = 202/455 (44.40%), Postives = 294/455 (64.62%), Query Frame = 3
Query: 309 AAEVSGGAASIPAMEEPAPTTSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAF-GAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRP-MFAGTGT--LNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWR-KAEVGANYVVAGLGVALALLGGGLSIKKSFF*K 1658
AA + G+ +P + + G +V + FNLIKN++GAG+L++P GV AFS + A+VP VA+ +G+GS+S YCF+LI RVCA +YG+AW K++G+KT+W+ ++CT KTF AC A+SII+ D FS +F A G PA+++ RTN + ++S +LLPLC+LK + L+ S+LG+LGTV+T V+ +R D SY GG+F +A S RP + +G+ + L+P+ +L+SMLST+FIAH+NAPKFY EL+++S+ + N VV +SF + + +LTFGGAS+ ILNNYA D LA CR+AI SIV GYPL F+ + G +SL G K P+ + V T +LLA + + V L D+GFVVS GGA+LGS +++IFP +++I Q G V+ K EV N + LGV LA++G +S+ K+FF K
Sbjct: 70 AAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPK----------LNKVVKNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVAKGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFFLK 514
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 350 bits (898), Expect = 3.560e-108 Identity = 209/472 (44.28%), Postives = 278/472 (58.90%), Query Frame = 3
Query: 249 VSTVDVFNKPPTARGAVVMVAAEVSGGAASIPAMEEPAPTTS----SGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRPMFAGTGTLNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGN-PVKGWRKAEVGANYVVAGLGVALALLGGGLSIKKSF 1649
V + N P RG + + A S+ A A T S +G + SIFNL+K++VGAG+LA+PGGV AFS + GA+ + +G +S YCFSLIGRVCA+ A +Y DAW+K+I KT+WLP +C KT C+ YSII+GD S + + FG PA+++ARTN L L++ ++ PLCLLK+L +L +TS+LG+ GTVYT + M IR D SY GGRF + G +LIL+SMLSTAFIAH+NAPKFY +LK+KSV R +N VV +SFA A+ V + F FLTFGGAS F+LNNY+ D L T RV I SI+ GYPLVF+ + G +SL G NP + LL T + L +LGFV SFGGA+ GS +++IFPTLM A K G + + E N + GLGV L +G +S+ K+F
Sbjct: 30 VKKFSLSNNPALVRGGAISSPSPPQ--AVSLNAAAAAATTQSKVEDTGSPIPASIFNLVKSIVGAGVLALPGGVAAFSDAPGAMAAAAGLTGAMGLLSAYCFSLIGRVCAAYDAKTYFDAWAKSISPKTAWLPAFACNFKTLIGCILYSIIIGDTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPAQPSFNVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPR----------YNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLMMNAAIKDKTAKGEWEMTPQLQREQLLNSFICGLGVLLGGVGATVSVLKNF 489
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A7S2G3A0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3A0_9STRA) HSP 1 Score: 326 bits (836), Expect = 8.970e-100 Identity = 190/435 (43.68%), Postives = 273/435 (62.76%), Query Frame = 3
Query: 363 PTTSSGV-TVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVE-GGRFFSGLAESGRPMFAGTGT---LNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQ----RKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWRKAEVGANYVVAGLGVALALLGGGLSIK 1640
P+ G T+ IFNL+K++VGAG+L++P G+ AFS + +P V +I +G S Y FSLIGRVC+ TGA+SY +AW+ ++GEKT+ LPT SCT T A +AYS+I+ D F +F G RT +L ++S +L PLCLLK+LS+L+ S+LG++G +YT + +GIRYF K+Y+ G+F G+A+ +P+F TG L P A IL+ MLSTA++AHFNAPKFY ELKD ++KR +NTVVASSF +++L+ ++ F+TFG +S ILNNYAT D L + R+A+A S+V YPL F + G M + G + KV T+ LL+ T + + + DLGFV+SFGGA LG+AL+++FP LM+ K + KG R+ EV LG+ + +GG ++IK
Sbjct: 20 PSVGGGTATMSAEIFNLVKSIVGAGVLSLPAGIAAFSNAPSGAIPAVGLIAAIGMFSAYGFSLIGRVCSYTGATSYREAWANSVGEKTASLPTVSCTFMTTCATLAYSMILADTFKSLFATAGMAI---TRTQSLFGITSLVLFPLCLLKNLSSLAPFSLLGIVGMLYTTLAIGIRYFGKTYLAPAGKFLPGVAKELQPVFGTTGAKGVLKPNAFILICMLSTAYMAHFNAPKFYNELKDNTIKR----------YNTVVASSFGVSIALMAVIGALGFMTFGASSSPLILNNYATKDGLMSLSRIAVALSLVFSYPLAFAGLRDGFMDMAGVSKEKKADPAFLNKV-TAGLLSGVTGLALVVKDLGFVMSFGGATLGNALIYVFPALMFRKAVKDMGDKAS--KGLRR-EVWLAVFSGCLGIVMGGIGGTMAIK 437
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A7S2VHC0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHC0_9STRA) HSP 1 Score: 313 bits (803), Expect = 1.920e-95 Identity = 171/418 (40.91%), Postives = 262/418 (62.68%), Query Frame = 3
Query: 408 LIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRPMFAGTGT---LNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVG--TSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKN-GNPVKGWRKAEVGANYVVAGLGVALALLGGGLSIKK 1643
++K +VG G+L++P G+ AF + A +P +I +GS++ Y FSL+GR+CA TGA+SY AW +T+G T+W+P SSC KTFFA +AYS+++GD FS +F+ FG +R AL ++ T+L+PLC LKDLS+L+ S++G+ G +YTA+ M +R+FD SY EGG+ + +AES RP G + A IL+ MLSTA++AHFNAPKFY EL++ ++ R +NT VA+SF+ ++ + + F TFGGAS ILNNY+T D L RVA+A ++V YPL F+ + G + + T K+ T ++LA+ TA+ + +TDL F++SFGGA LG+AL++++P +M+ + KN G+ +K EV A LG+ + +G +++ K
Sbjct: 1 MVKAIVGVGVLSLPAGIAAFGDAPSASIPAAILIASIGSIAAYNFSLLGRLCAMTGATSYKSAWEETVGASTAWIPGSSCVIKTFFAVLAYSMVLGDTFSALFETFGFNV---SREKALIGLTVTVLMPLCKLKDLSSLAPFSLVGIAGMLYTALAMAVRFFDGSYAEGGKLAADVAESLRPALGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELENNTIAR----------WNTCVATSFSISILFFIGIAAMGFSTFGGASNGLILNNYSTKDSLMGFSRVAVAFALVFTYPLAFVGCRDGTLEMMQVPKEERTDAKLNNLTYIILASVTAVAMKITDLSFIMSFGGATLGNALIYVYPAIMF----RSAVKNLGDDATAAQKLEVKLAMAFAALGIGMGAIGTKMALGK 401
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A1Z5JSY6_FISSO (Aa_trans domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY6_FISSO) HSP 1 Score: 317 bits (812), Expect = 2.530e-95 Identity = 186/421 (44.18%), Postives = 258/421 (61.28%), Query Frame = 3
Query: 363 PTTSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGGRFFSGLAESGRPMFAGTGTL-NPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWRKAEVGANYVVAGLGVALALLG 1622
P++ TV + IFNL+K +VGAG+L++P G+ + + GAV P V +I +GS+S Y F+LIGR CA TG ++ AWS + EK+SW+P S T KT FA +AYS+I+GD F+ +F G +++ AL V+ST+LLPLCLLK+L+AL+ S+LG LG VYTAI M IRYF K+Y GG+F L S +P F ++ NP + ILL MLSTA++AHFNAPKFY ELKD ++ R V VVA+SFA ++ L M FLTFGG S ILNNY++ D L + R A+A S+V YPL F A+ G + L N + + T LL+ T + + + D+ FV++F GA LG+AL++I+P +M+ K NP K +K E A LGVA+ +G
Sbjct: 100 PSSGGTATVSQLIFNLVKGIVGAGVLSLPAGIAKYGNAPGAVTPAVFLIAAIGSLSAYGFALIGRSCALTGTKTFRQAWSAAVSEKSSWIPAWSVTLKTMFAVLAYSMILGDTFASLFATAGFAV---SKSTALIGVTSTLLLPLCLLKNLNALAPFSLLGSLGMVYTAIAMAIRYFGKAYAVGGKFAKDLPVSLQPAFGTQSSVFNPASTILLGMLSTAYMAHFNAPKFYTELKDNTIPRYVK----------VVATSFAISIGLFASMAGIGFLTFGGNSAGLILNNYSSRDGLMSISRFAVALSLVFSYPLAFTGARDGVLDLLKVNNASNKFLNLLTVGLLSGITGLAIIIPDVSFVMAFAGATLGNALIYIYPAIMFRGAVN---KLSNPTK-MQKRETKFAMGSAFLGVAMGTVG 503
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A7S1YN12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YN12_9STRA) HSP 1 Score: 316 bits (809), Expect = 2.890e-95 Identity = 187/451 (41.46%), Postives = 270/451 (59.87%), Query Frame = 3
Query: 318 VSGGAASIPAMEEPAPTTSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSYVEGG--RFFSGLAESGRPMFAGTGT---LNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQR----KVGTSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCKQDAKNGNPVKGWRKAEVGANYVVAG--LGVALALLGGGLSI 1637
VSGGAA PA TT+ G ++ +FNL+K +VG G+L++P GV AF +R A +P +IV +G +S Y F+LIGRVCA TGA S+ +AW+ T+G+KTSW+P + T KTFFAC+A+S+++ D FS + ++R L V+ +LLPLCLLK+L +L+ S+LGV+G YTA+ M +R D SY GG +F +A +P F G L+P +LIL+ MLSTA++AHFNAPKFY ELK+ +++R FNTVV F ++ L +T+ F TFG A +LNNYA TD L + R+A+A S+V YPL F + G M + K P E + V T LL T + LTD+ FV++FGGA LG+AL +++P LM+ A KQ + + ++G N +A LG+ + ++G ++I
Sbjct: 66 VSGGAAETPA------TTTEGASIPSEVFNLVKGIVGVGVLSLPAGVAAFGDARSAFIPAGILIVSIGILSAYGFALIGRVCAYTGAKSFREAWTATMGDKTSWIPAWTVTLKTFFACLAFSMVLADTFSSLLS--------TSRNPTLLGVTGLVLLPLCLLKNLKSLAPFSLLGVMGMAYTALAMSVRLLDGSYSAGGSGKFMEQVASHLQPKFGDAGASSVLSPQSLILVCMLSTAYMAHFNAPKFYLELKNNTIQR----------FNTVVTYGFGISIFLTGFITMIGFFTFGKACDGLVLNNYAGTDILMSLSRIAVAVSLVFSYPLAFTGCRDGFMDIA--KIPMEKRSAGTLNVVTLALLGVITFCAITLTDVSFVLAFGGATLGNALTYVYPALMYRAVVKQQERT--------EEQMGVNVSLASAVLGIVMGIIGARMAI 482
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Match: A0A7S1Z4Z3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Z3_TRICV) HSP 1 Score: 312 bits (799), Expect = 7.160e-95 Identity = 175/396 (44.19%), Postives = 246/396 (62.12%), Query Frame = 3
Query: 354 EPAPTTSSGV-TVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRGAVVPTVAMIVGLGSMSGYCFSLIGRVCASTGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIVGDVFSEVFKAFGAPAIISARTNALCLVSSTILLPLCLLKDLSALSYTSILGVLGTVYTAIVMGIRYFDKSY-VEGGRFFSGLAESGRPMFAGTGT---LNPLALILLSMLSTAFIAHFNAPKFYAELKDKSVKRSVACVHDLWVFNTVVASSFAAAVSLVVIMTLFPFLTFGGASKSFILNNYATTDRLATSCRVAIATSIVGGYPLVFMPAKTGAMSLFGYKNPTETQRKVG--TSLLLAAFTAIGVALTDLGFVVSFGGAVLGSALVFIFPTLMWIAKCK 1520
EP + G T+ IFNL+K++VGAG+L++P G+ +FS + G ++P +I +G++SGY FSLIGRVC+ T A SY DAWSK++G+++SW+P SCT KT A +AYS+I+ D F + G +R+N L V+ +LLPLCLLK+LS+L+ S+LG+ G YTA+ MG+RYF Y V G+F + +A P F TG LNP IL+ MLST+++AHFNAPKFY ELK+ ++ R +N VV+SSFA +V V+M FLTFG AS ILNNY+T D L RVA+A +IV YPL F + G + L T + T L+ TA+ + DL FV+SFGGA LG+AL++++P +M+ + K
Sbjct: 1 EPVSSVGGGTSTIPNHIFNLVKSIVGAGVLSLPAGIASFSNAPGGLLPATVLIAAIGAISGYGFSLIGRVCSYTDADSYRDAWSKSVGDESSWIPAWSCTFKTLCAVLAYSMILADTFKSILFTAGVQM---SRSNTLFGVTGLVLLPLCLLKNLSSLAPFSLLGIAGMAYTALAMGVRYFGGGYLVPDGQFLADIAPQFVPRFGTTGAMGVLNPNVFILICMLSTSYMAHFNAPKFYTELKNNTIAR----------YNAVVSSSFAISVLFFVVMASLGFLTFGSASSGLILNNYSTKDSLMGLSRVAVALAIVFSYPLAFAGLRDGVLDLLSIPKDKRTNSLLNKVTLAALSGVTALACVVKDLSFVLSFGGATLGNALIYVYPAIMFRSAVK 383 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig100.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig100.40.1 >prot_S-latissima_F_contig100.40.1 ID=prot_S-latissima_F_contig100.40.1|Name=mRNA_S-latissima_F_contig100.40.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=528bp MTFTKGLLLALLSASAADTGLAFARGRRDTRAGFVAPAPRNSGFAFVPPVback to top mRNA from alignment at S-latissima_F_contig100:386308..405728+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig100.40.1 ID=mRNA_S-latissima_F_contig100.40.1|Name=mRNA_S-latissima_F_contig100.40.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=19421bp|location=Sequence derived from alignment at S-latissima_F_contig100:386308..405728+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig100:386308..405728+ >mRNA_S-latissima_F_contig100.40.1 ID=mRNA_S-latissima_F_contig100.40.1|Name=mRNA_S-latissima_F_contig100.40.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=3168bp|location=Sequence derived from alignment at S-latissima_F_contig100:386308..405728+ (Saccharina latissima SLPER63f female)back to top |