mRNA_S-latissima_F_contig10.32.1 (mRNA) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI) HSP 1 Score: 570 bits (1469), Expect = 3.020e-181 Identity = 433/1159 (37.36%), Postives = 555/1159 (47.89%), Query Frame = 1
Query: 61 TKTAPKTVPGTCVVCFSDGEDGVLDADWLHQELGVGAGVASMSVGKGTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRCMCCPRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATN-------HEKIATTERKKG-PDFTDTSAN----------------EAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARRGHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVIRR------DL---PEDDAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQLDDSPDVN-----LPSTNDHTTLSDGFYPLLDDDEDLRNEGMSHQNQGFGENLSNETTPVPMP---VTPSEELRLANLFAEIYPVEVCLARSMMFEEEHPQFTAQWATARGRAWGDSMPEPLDYFGRSGPVSAENVSEAERRWREDSAQNWRACNVSAVDEASRQDANARARVVEALY-GDDRSERSTLLPYVAAEHARAALRIVRP--------------ARAE-------------DALFSWLGIEEPEEDTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAWESPFSRAIMEVEEPPPLPAPGAMWTPMPQRR-----FNPPPVTQCRGGLGVLNPRGGRHLGSENICVCFFCSRGGAWLVGGLSFFLACIGLKNVCGREEGRLSEAWVALWGRRGG---------GGQHQGEQPAVRAAARRCVFLEAYPEQACPEQGPSMKAFVRRNYGAVERARAEATAQRAAAWEMMHDHQPEXXXXXXXXXXXXXXXXXXXXXXXXXRFERAHAAYTSNLQEXXXXXXXXXXXXXXXTSRCAMGADNSYLDRLAEAWEKTNRPRIAAKRFEDAHSVGEGGASNPA--------------AXXXXXXXXXXXXXXXVIVPMLVERTVLMCDCELGPIADDAAEWANLNADRFEREFERMET---------AAXXXXXXXXXXXXAGRMLAGCACETDGA---CSRLVS 3210
+K P T PG C+VC D D VLD+ WLH+ + A ++ VG GT C +CVSCLKTYF GIV +GFDGACPRMRCMCCPR VCE WAPLV+ +VLETF+ RA TLLS+QCG CHSRG+ MV PP DH YSSAL+ LMA IA+ AT +G P +S N E FR++L RY SG E D Y +EA ++ + G+ E+R MV ++SCVEDSERRA+LHIRF+R +PM+ T CCK+LHC+ CRV+ GH TCEQYEA RGHQDVC+CPGCGVYVVKGDGCDSI+C+CG FSW+ L+ R+ A AFR AHP D GRAAA++IRR DL P++D XXXXXXXXXXXXXX +P +D + P ++L + Q E +E PVP ++ +E RLAN +AE YP E+ R++++ EE+P FT Q A A+ + L YF + P S SE E W +A++WR N V+ R+D AR+ +VEA Y GDD LL ++AAE+AR+ALR+ P +R E + LF WLGI EP T DAWE PF+ A +EVE LP P ++TP P R P P + RG L+P L + + W+ G + GL+ + +E LS+AWVALW R G+ AVRAAARR VFLEA+PEQAC EQG MKAFVRRN V +A EA A+ AAAWE MHD+ + F+RA+AAY ++ TS + + R+A+AWE N R+ A+RF D H G GA A A V+ PML+ R MC+C++G I +A +W N + FE E +RME A GR+L GC C + + CSRLV+
Sbjct: 50 SKKVPGTRPGACMVCLEDC-DNVLDSAWLHR---LAASSSASDVG-GTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGI-GQAAQESRDELMVLLMSCVEDSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEHVGARGDIEEQQQQGHEYPLDAPAATAAGTXXXXXXXXXXXXXXQPATSGAWGEPVXXXXXXXXXXXXQRWVPGVEQGPGAADAWQPNQRPAQELERAPLHGTGQATIEEERDEPVPVPEENGRLSAEDEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQSSQLPPLL--ALSYFHQPCPAS---TSETEAAWLMRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSGDD------LLRHIAAEYARSALRVAPPFTSVAATDRPRAFWSRLEQYLQQQANGEQNGEPLFKWLGIVEPPPPTGDQSTWEEGDDGAVADE-----------------------DAWEVPFADAEIEVETFEVLPPPRRLFTPWPSARTGRVDLRPTPPSS-RGRRHALDPASRLVLATSTFGTLNLRAEVELWVAG---TNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDA-AVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNHDDVDASHSSTTPPASTSPST--------FDRAYAAYRKHIDTRASAALVANSLPP--TSVASATLQLRRIGRMADAWESANHRRVCAQRFAD-HFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLSPGTMAGKNVKDEGCSGGGMGRILDGCECNLESSVSSCSRLVA 1152
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE) HSP 1 Score: 376 bits (966), Expect = 9.860e-111 Identity = 299/932 (32.08%), Postives = 407/932 (43.67%), Query Frame = 1
Query: 571 EAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARRGHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVIRRDLPEDDAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQ--LDDSPDVNLPSTNDHTTLSDGFYPLLDDDEDLRNEGMSHQNQGFGENLSNETTPVPMP---VTPSEELRLANLFAEIYPVEVCLARSMMFEEEHPQFTAQWATARGRAWGDSMP--EPLDYFGRSGPVSAENVSEAERRWREDSAQNWRACNVSAVDEASRQDANARARVVEALY-GDDRSERSTLLPYVAAEHARAALRIVRP----ARAEDALFSWLGIEEPEEDTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAWESPFSRAIMEVEEPPPLPAPGAMWTPMPQRR-----FNPPPVTQCRGGLGVLNPRGGRHLGSENICVCFFCSRGGAWLVGGLSFFLACIGLKNVCGREEGRLSEAWVALWGRRGG---------GGQHQGEQPAVRAAARRCVFLEAYPEQACPEQGPSMKAFVRRNYGAVERARAEATAQRAAAWEMMHDHQPEXXXXXXXXXXXXXXXXXXXXXXXXXRFERAHAAYTSNLQEXXXXXXXXXXXXXXXTSRCAMGADNSYLDRLAEAWEKTNRPRIAAKRFEDAHSVGEGGASNPA--------------AXXXXXXXXXXXXXXXVIVPMLVERTVLMCDCELGPIADDAAEWANLNADRFEREFERMET---------AAXXXXXXXXXXXXAGRMLAGCACETD---GACSRLVS 3210
E FR +L RY +G E D Y +EA ++ + G+ E+R MV +LSCV DSERR +LHIRF+R +PM+ T C K+LHC+ CRV+ GH TCEQYEA RGHQDVC+CPGCGVYVVKGDGCDSI+CVCG F+W+ L+ R+ AFR AHP D GRAAA++IRR P A+Q ++ P +D P + ++L QG E +E PVP ++ +E RLAN +AE Y E+ R+ ++ EE+P FT Q R RA D +P L YF + P SE E W +A++W N V+ R+D AR+ +VEA Y GDD LL ++AAE+AR+ALR+ P A + W +E+ ++ A DAWE+PF+ A +E E LP P ++T P R P P + G L+P + + W+ G + GL+ + +E LS+AWVALWG R G+ AVRAAARR VFLEA+PEQAC EQG MKAF+RRN V +A EA A+ AAAWE MHD++ + F+RA+ AY ++ + + + R+ +AWE N R+ A+RF D H G GA A A V+ PML+ R MC+C++ I +A +W N + FE E +RME A GR+L C C+ + +CSRLV+
Sbjct: 53 ERFRDSLERYIAGYEIDPSPCYIALEAAIANPGI-GQAAQESRDELMVLLLSCVVDSERRENLHIRFIRSNPMVVTRCYKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCVCGHCFNWSELVAARHRRIVDAFRDAHPEDTGRAAAQIIRRGPPT-------------------------------------AADLGTGPQEDINEHVGAHGDIEAQQHGVEHGPGAG----------ADAGQPNQEAVQELERAPRHRTGQGTVEEERDEPVPVPGENGRLSAEDEFRLANAYAEAYRRELARGRAAIYGEENPHFTVQ----RARAQSDQLPPLSALSYFRQPRPAIC--TSETEAAWLTRAAEDWLTTNQGKVNVVRRRDEAARSSLVEAFYSGDD------LLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQNGEPLFKWLGIVEPPPPTGDQSTWKDDDDGAVADEDAWEAPFANAEIEEETFEILPPPQTLFTAWPSARTERVDLRPTPPSSW-GRRRALDPASRLVSATSTFGTLRLRAEVELWVAGSN---IRQKGLRRLMAVQERELSKAWVALWGHRRRLDPVSKTWVDADDSGDA-AVRAAARRVVFLEAHPEQACQEQGAMMKAFIRRNGAVVLKAVEEADAELAAAWERMHDNRDDVDAAHSSTTPPASTSPAA--------FDRAYTAYRKHIDTRASAALVANSLPPTCAASATLQLRR--IGRMVDAWESANHRRVCAQRFAD-HFSGAAGAEKAAQEREALPKRPRESRAAANEDATAFGDVVALVVAPMLIGRASQMCECDMEAILSNAVDWVAFNGEAFEEELQRMEARLKLPPGTMAGKDGKNEGCSEGGMGRILDRCECKLERSVSSCSRLVA 908
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.430e-43 Identity = 122/361 (33.80%), Postives = 169/361 (46.81%), Query Frame = 1
Query: 52 ETVTKTAPKTVPGTCVVCFSDGEDGVLDADWLHQELGVGAGVASMSVGKGTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRCMCCPRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLAL-----VTGEGQDETRY----------ARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARR--GHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVIR 1083
E V A G C VC + + V+ A++LH A +C CL YF IV G++G CPRM+C CP V E W+ LV+ FR RA LL+LQC SCH+R S M + ++ SA +A DF + + A + L + +G + V F + + A V + VT E E + A M VL C++D ERRA LH RFL HP+++T CC A+HC+RCRV H G TC +Y+A + V CP C +Y+VK DGC S++CVCG GF + S + + G P +PG AE++R
Sbjct: 67 EAVAAKARLRTAGMCSVCMEEQQ--VVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM-----EFAHYSAGSA---------------------DF-ERALPGALAADLHLFEAGAISATV-FVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRL-----QELGLLHTEVPPEPG---AELVR 389
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK) HSP 1 Score: 177 bits (448), Expect = 1.530e-41 Identity = 114/301 (37.87%), Postives = 142/301 (47.18%), Query Frame = 1
Query: 199 GTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRCM-CCPRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPP--PDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVS-VLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARR-GHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVIRR 1086
G CP SC +CLKT+FE IV G+DG +M C C TV AW+P VD S LE F+ RA LLSLQC CHSR + P + N L + H + ++ +R AL R+ GE+ + F E D +A VL V D+ RA LH+R+LR HP + T CC+A CFRCR H G TC + A H D+ C CG+ +VKGDGC S+TCVCG F W R R V A G F+ H D R AA R
Sbjct: 87 GPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEH-----------------AGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGLQLVKGDGCSSVTCVCGNHFDWD--QRCREVFADG-FQERHGEDASRLAALAHHR 367
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK) HSP 1 Score: 151 bits (382), Expect = 2.900e-34 Identity = 101/301 (33.55%), Postives = 143/301 (47.51%), Query Frame = 1
Query: 199 GTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRC-MCCPRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGE--EADVVKFYDEVEAVVSLALVTGEGQDETRYARMVS-VLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARR-GHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVIRR 1086
G CP +C SC ++FEGIV+ +DG +M C C V WA D +L F+ RA LLSLQC CH+R + D S + + M I T + +E++ +AF AL + SG E D F+ + + DE + ++ +L + D+ +RA LH+R+LR P T CCK + CFRCR H G TC Q A + + +V CP C + +VKGDGC S+TCVCG+ F+W + E FR + GR AA + R
Sbjct: 87 GPKCPLVACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDLFI---QDQSLPTDADKHMEGIET---MLVASEKR-----------DAFSQALGLFTSGSINEED---FFQLICITLFPDQFQSSSPDEGPWEDVMKPILLSIRDARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQWHEGQTCSQVLAAQFQNSEVLTCPACAIQLVKGDGCSSVTCVCGKTFNWDQRKKECVAET---FRDLYGDSAGRMAALMFIR 364
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 146 bits (369), Expect = 3.250e-34 Identity = 97/295 (32.88%), Postives = 141/295 (47.80%), Query Frame = 1
Query: 199 GTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRCMCC-PRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQY----EARRGHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAA 1068
G+ CP +C C+ +F+ ++SG+DG +M C C R+V W P+ ++ + RA LL+LQC CH R + + PD + L A E + ER F D N+ + R ++ ++ E + + LV M +L + D RA L++R+LR +P + T CC+A CFRCR D H G+TCE+ EA + DV CP C + +VKGDGC+ +TCVCG GF W L R ++ AA A R G P AA
Sbjct: 98 GSDCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTIL----PDEDENQVLPTDGMPKAVKEELLMEFER-----FNDGKIND--QELYERIST--------YFFSFENLPNPWLV------------MQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA-SLAAAFAARRGPGGAPWAAA 360
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK) HSP 1 Score: 140 bits (353), Expect = 1.070e-32 Identity = 94/288 (32.64%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 220 SCVSCLKTYFEGIVTSGFDGACPRMRCMCC-PRTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQY----EARRGHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAA 1068
+C C+ +F+ ++SG+DG +M C C R+V W P+ ++ + RA LL+LQC CH R + + PD + L A E + ER F D N+ + R ++ ++ E + + LV M +L + D RA L++R+LR +P + T CC+A CFRCR D H G+TCE+ EA + DV CP C + +VKGDGC+ +TCVCG GF W L R ++ AA A R G P AA
Sbjct: 42 ACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTIL----PDEDENQVLPTDGMPKAVKEELLMEFER-----FNDGKIND--QELYERIST--------YFFSFENLPNPWLV------------MQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA-SLAAAFAARRGPGGAPWAAA 297
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.020e-29 Identity = 91/273 (33.33%), Postives = 127/273 (46.52%), Query Frame = 1
Query: 199 GTGCPAASCVSCLKTYFEGIVTSGFDGACPRMRCMCCPRTVCEPA-WAPLV--------DTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARRGH-QDVCQCPGCGVYVVKGDGCDSITCVCGEGFSW 987
G C C SCL + V SG+ GA RM C P+ + W P V ++++ F A +LSLQCGSCH+R M P A+ AL A A ++ + ++ P + E + E AL G+D T + + L +ED ER+A+LH FLR P + CCK++HCFRC + H TCE+++A R +DV CPGCGV + KGDGC S++CVCG F+W
Sbjct: 45 GPDCQTIMCSSCLAEHCRVTVDSGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLMR-PTSKALADKAMQALQASHAPVYDHLY--KQHVEPFLVGAVSQEHVIVQCEAFLPKPE---------------FALTHPSGKD-TAFGLL---LDSIEDDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNW 295
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A7S1XW06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW06_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.710e-28 Identity = 99/308 (32.14%), Postives = 139/308 (45.13%), Query Frame = 1
Query: 208 CPAA------SCVSCLKTYFEGIVTSGFDGACPRMRCMCC-PRTVCEPAWAPLV--DTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADI--ATNHEKIATTERKKGPDFTDTSANEAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMV--SVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARR---GHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTS-------LMRGRNVEAAGAFR----AAHPG 1050
CPA +C CL YF G+VT G+CPR+ C+ RTV WA +V + E A LS QCGSCH+R S + + + +L+A + + T K A E +G +A + + A+ + A G D A ++ +V CV D ERRA+L +R LR P +T CC+ HCF CR H +C +Y + G ++ C C + + KGDGCDS+TC+CG FSW+S + R R E+A A R AA PG
Sbjct: 58 CPACEAEGLWTCRGCLDHYFSGVVTGAVIGSCPRVACLYHHARTVPAHRWARVVAKPDELKERHAKAARDALSFQCGSCHARRSLYL--EEETANVDSLDAGLCHVLGGTAEVKAAVREYNEG----GMTAEDLYALLAAKLPP----------------LRAAAENPHGSDVVEPAEVIVDAVARCVADPERRAALQLRHLRTVPRFRTRCCRVEHCFNCRTRAWHGSQSCAEYARKANASGRVELVTCFKCDLQLTKGDGCDSVTCICGHAFSWSSRVEEMATMRRERRAESAAALRDEVCAARPG 343
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Match: A0A482RY51_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY51_9ARCH) HSP 1 Score: 130 bits (326), Expect = 8.730e-28 Identity = 86/287 (29.97%), Postives = 131/287 (45.64%), Query Frame = 1
Query: 250 EGIVTSGFDGACPRMRCMCCP-------RTVCEPAWAPLVDTSVLETFRDRATTLLSLQCGSCHSRGSAMVVPPPDHSYSSALNALMADIATNHEKIATTERKKGPDFTDTSAN---EAFRSALARYASGEEADVVKFYDEVEAVVSLALVTGEGQDETRYARMVSVLSCVEDSERRASLHIRFLRFHPMMKTTCCKALHCFRCRVMDGHPGLTCEQYEARRGHQDVCQCPGCGVYVVKGDGCDSITCVCGEGFSWTSLMRGRNVEAAGAFRAAHPGDPGRAAAEVI 1080
E + S + G CP + C R + W + + + A +LL+ CG CHS L +L D+ + A ++ + +D++ N A +A+ Y G V +FY+++ + S D + + +L + D ERRA+LH+R+LR P +KT CC HCFRC++ D H G TC + H VC CP CG+ + KGDGC+++TCVCG+ FSW+S N E F AHP + A V+
Sbjct: 2 ESKIQSAYMGTCPIIHCPSTMHHKSKKRRVIPYTKWKEALPAEISTKYNSLANSLLAFLCGGCHS-----------------LKSL--DLGHESNRSANCYQQLARNLSDSAGNCKMAALETAVESYCLGGIL-VDEFYEDL--LKSFFTRLTSLNDAEAWEQFSDLLRIIPDPERRANLHLRYLRDRPRIKTLCCSREHCFRCKIKDFHEGKTCMENTESLDHSIVC-CPSCGIALAKGDGCNTVTCVCGKQFSWSSEKE--NTERCHLFLQAHPNNTSVQCAHVL 263 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig10.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-latissima_F_contig10.32.1 >prot_S-latissima_F_contig10.32.1 ID=prot_S-latissima_F_contig10.32.1|Name=mRNA_S-latissima_F_contig10.32.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=1077bp PASANHEHDEEPSKADLETVTKTAPKTVPGTCVVCFSDGEDGVLDADWLHback to top mRNA from alignment at S-latissima_F_contig10:989019..998608+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-latissima_F_contig10.32.1 ID=mRNA_S-latissima_F_contig10.32.1|Name=mRNA_S-latissima_F_contig10.32.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=9590bp|location=Sequence derived from alignment at S-latissima_F_contig10:989019..998608+ (Saccharina latissima SLPER63f female)back to top Coding sequence (CDS) from alignment at S-latissima_F_contig10:989019..998608+ >mRNA_S-latissima_F_contig10.32.1 ID=mRNA_S-latissima_F_contig10.32.1|Name=mRNA_S-latissima_F_contig10.32.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=6462bp|location=Sequence derived from alignment at S-latissima_F_contig10:989019..998608+ (Saccharina latissima SLPER63f female)back to top |