mRNA_S-latissima_F_contig10.30.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-latissima_F_contig10.30.1
Unique Name	mRNA_S-latissima_F_contig10.30.1
Type	mRNA
Organism	Saccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)

Homology

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: D7FL43_ECTSI (UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL43_ECTSI)

HSP 1 Score: 564 bits (1454), Expect = 9.440e-192
Identity = 285/382 (74.61%), Postives = 313/382 (81.94%), Query Frame = 1

Query:  160 LRPTMRSPPMVVLTATAAACLSSMHGGKAMAFAARVLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYK--MMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            +R   R      +  T A  L   +    MAFAARVLVTGGAGYIGSHTC+ELIKAGEKVVVVDDLSN+VEESLNRVRELTKCDDDQL+FR+V   LL  P L  V   +       F G   +   +    L+    RNNIEGTLNLVECMQ Q GCRKLVFSSSATVYGEPDKLPLDE SSVGVGITNPYG+TKYMIEEIL+D++K+DPSWDILLLRYFNPIGAHESGRMGEDP GIPNNLMPFVAQVCVGRREFLSVFG+DY TPDGTGVRDYIHVMDLAEGHVAAV+KLR+SCTGC  +NLGTG GYSVM+VVKGME+A G P+PYK  +MPRRAGDVE+MYADPSLA+ MLGW+AKR LKDMC DTW+WQSAHPNGY
Sbjct:    1 MRQAQRRSLWAPVATTVALALGVTNVRPGMAFAARVLVTGGAGYIGSHTCVELIKAGEKVVVVDDLSNAVEESLNRVRELTKCDDDQLVFRKVN--LLDQPALESVFNDYEFDSCVHFAGLKAVGESVAKPLLYY---RNNIEGTLNLVECMQKQPGCRKLVFSSSATVYGEPDKLPLDESSSVGVGITNPYGRTKYMIEEILRDMSKSDPSWDILLLRYFNPIGAHESGRMGEDPEGIPNNLMPFVAQVCVGRREFLSVFGDDYGTPDGTGVRDYIHVMDLAEGHVAAVRKLRESCTGCAAVNLGTGSGYSVMDVVKGMEEACGNPIPYKEQVMPRRAGDVEAMYADPSLAKSMLGWTAKRGLKDMCTDTWRWQSAHPNGY 377

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A835YLY8_9STRA (Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY8_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 9.130e-154
Identity = 243/352 (69.03%), Postives = 279/352 (79.26%), Query Frame = 1

Query:  244 AMAFAARVLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            A AFA RVLVTGGAGYIGSHTCLELIKAGE+VVVVD+L N+VEESL RV +LT C+  QL FR+V   LL    LR V   F       F G   +   +    ++    RNNIEGTLNLVE M+ + GC+KLVFSSSATVYG P+KLPLDE S VG GITNPYG+TKYMIEEIL+D   ADP+W+IL+LRYFNPIGAHESGR+GEDP GIPNNLMPFVAQV VGRREFL+VFG+DY+TPDGTGVRDYIHV DLAEGHVAA+ KLR    GC  +NLGTG GYSV EVVK ME ASGK +PYK++PRRAGDVE+MYADPS A++ L WSA R LK+MC+DTW+WQS +P+GY
Sbjct:   21 AQAFA-RVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVD--LLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYY---RNNIEGTLNLVEAMR-EHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 365

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A6V1XCR0_HETAK (UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XCR0_HETAK)

HSP 1 Score: 415 bits (1067), Expect = 6.620e-134
Identity = 210/354 (59.32%), Postives = 259/354 (73.16%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTG---------CVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            +LVTGGAGYIGSHTC+EL+ AG+KVVVVD+L NS EESL RV+E+T C    LIFR V   LL    L  V   F       F G   +   +    +  S  RNNIEGTLNL++CM+ ++GC+ +VFSSSATVYG+P++LP+ E  ++    TNPYG+TK  IEEIL+DL  +DPSW I+LLRYFNPIGAH SGR+GEDP GIPNNLMPF+AQVCVGRRE L++FGNDYNTPDGTGVRDYIHV+DLA GH AA++KLR              CV INLGTG G SV+E+V GM++A+G  +PYK+ PRR GDVES+Y DP+ A+  LGW A+  + +MC DTW+WQS +PNGY
Sbjct:   24 ILVTGGAGYIGSHTCVELLNAGKKVVVVDNLCNSDEESLRRVKEITSCKSSDLIFRNVD--LLDRAALGKVFDEFTFDACVHFAGLKAVGESV---QIPLSYYRNNIEGTLNLLDCMK-EKGCKAIVFSSSATVYGDPERLPIAEDGTLRS--TNPYGRTKLFIEEILRDLHVSDPSWRIMLLRYFNPIGAHPSGRIGEDPKGIPNNLMPFIAQVCVGRREMLNIFGNDYNTPDGTGVRDYIHVVDLARGHTAALEKLRALAAAAGEGGEEGACVAINLGTGRGVSVLELVAGMQEATGGDIPYKIAPRRPGDVESLYCDPAFAESYLGWRAELGVAEMCADTWRWQSGNPNGY 369

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A7S2W7X1_9STRA (UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7X1_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 1.280e-126
Identity = 202/349 (57.88%), Postives = 251/349 (71.92%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGC-VPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGYLEA 1287
            +LVTGGAGYIGSHTCLEL++AG + VVVD+L NS EE+L RVREL KC  D L FR V   +     L  V+  F       F G   +   +    ++     NNI GT+ L++ + A+ G RK VFSSSATVYG+P++LPL E  S  +  TNPYG+TK  IE+IL+DLA AD +W I++LRYFNPIGAHESGR+GEDP GIPNNLMPF++QVCVGRR  LSVFGNDY TPDGTGVRDYIHV+DLA GH+AA+ KL +   GC VP+NLGTG G SV+++VKGME A+GK +PY+++ RR GD+   Y DPS A+  L W A R  ++MC+DTWKWQ  +PNGY  A
Sbjct:    2 ILVTGGAGYIGSHTCLELLEAGRRCVVVDNLCNSDEEALRRVRELAKCSSDALEFRHVD--MRDEAALEKVLDEFRIDSCIHFAGLKAVGESVKQPVMYYE---NNIGGTVQLLKSL-AKYGVRKFVFSSSATVYGDPEELPLKE--SCRLSTTNPYGRTKLFIEDILRDLAVADDTWRIIILRYFNPIGAHESGRIGEDPQGIPNNLMPFISQVCVGRRSELSVFGNDYGTPDGTGVRDYIHVVDLANGHLAALDKLDEDTDGCCVPVNLGTGRGISVLDLVKGMERATGKTIPYRIVDRRPGDIAECYCDPSFAKSFLNWKATRGTEEMCNDTWKWQQNNPNGYRAA 342

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A4D9CZK9_9STRA (UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK9_9STRA)

HSP 1 Score: 394 bits (1011), Expect = 1.660e-125
Identity = 204/364 (56.04%), Postives = 255/364 (70.05%), Query Frame = 1

Query:  241 KAMAFAARVLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFLLP--SHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDS------CTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGYLEA 1287
            ++ AFA  +LVTGGAGYIGSHTC EL+KAG ++VVVD+L NS E+S+ RV+E+T C    L FR +   LL    L  +   +       F G   +   +    ++ H     NNI GTLNL+E M   + C+ +VFSSSATVYG+P+KLP+ E   +    TNPYG+TK  IEE+L+D   AD  W IL+LRYFNPIGAHESGR+GEDP GIPNNLMPF+AQVCVGRRE LSVFG+DY TPDGTGVRDYIHV+DLAEGHVAAV ++ ++        GCVP+NLGTG G SV+E+VK M + SGK +P KM  RR GDV ++Y DP+ A + L W A R +KDMCDDTW+WQS +P GY +A
Sbjct:   10 QSQAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLD--LLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLTYYH-----NNIVGTLNLLEVMNKYK-CKNMVFSSSATVYGDPEKLPITEDQRLQA--TNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARAEGGKSLGCVPVNLGTGRGVSVLELVKAMRETSGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKA 363

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A1Z5JWU5_FISSO (UDP-glucose 4-epimerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWU5_FISSO)

HSP 1 Score: 388 bits (996), Expect = 3.860e-123
Identity = 202/349 (57.88%), Postives = 255/349 (73.07%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIK---AGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQ--VRNFLLYTPPLRGVMGRFFRGTSQMAPFLLPSHLHTSASR------NNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            VLVTGGAGYIGSHTCLEL++   A  +VVVVD+L NS +ESL RV+EL + D ++L+FRQ  +R+    T          F   S    F     +  S ++      +NI GT+NL+E +Q ++  RK VFSSSATVYGEP+ LPL E + +    TNPYG+TK  IEEIL+D+  ADP W IL+LRYFNPIGAH SGR+GEDP GIPNNLMP++AQVCVGRRE L+VFGNDY+TPDGTGVRDYIHV+DLA+GHVAA+ KL     GC  +NLGTG G SV+++V+GM +A+GKPVPY + PRR GDV ++YAD S+A+  LGW A+  +K+MC DTW+WQS +PNGY
Sbjct:   35 VLVTGGAGYIGSHTCLELLQDKDAQYRVVVVDNLENSSKESLRRVQELVQTDPERLVFRQCDIRDKACLTSVFEE-----FPQISSCIHFAGLKAVGESVAKPLAYYDSNIGGTVNLLELLQERQ-VRKFVFSSSATVYGEPEMLPLVETARLQA--TNPYGRTKLFIEEILRDVHAADPDWQILILRYFNPIGAHPSGRIGEDPQGIPNNLMPYIAQVCVGRREKLTVFGNDYDTPDGTGVRDYIHVVDLAKGHVAALDKLYREPVGCKAVNLGTGHGVSVLQLVQGMAEATGKPVPYDVGPRRPGDVATVYADASVAETFLGWKAELGVKEMCQDTWRWQSTNPNGY 375

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A7S3KXG9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXG9_9STRA)

HSP 1 Score: 387 bits (995), Expect = 1.170e-122
Identity = 196/346 (56.65%), Postives = 248/346 (71.68%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQ--------VRNFLLYTPPLRGVMGRFFRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            VLVTGGAGYIGSHTCLEL+     VVVVD+L NS EESL RVR+LT C +D+L FR         +   L   P +   +   F G   +   +    ++      NI GT++L+E + ++ G +  VFSSSATVYG+P+ LP+ E + +    TNPYG+TK  IEEIL+D   AD +W+ L+LRYFNPIGAH SG +GEDP GIPNNLMPF+AQVCVGRRE LSVFG+DY+TPDGTGVRDYIHV+DLA+GHVAA+  L +   GC  +NLGTG G SV+E+VKGM +A+G PVPY++ PRR GDV S+YADP+LA+K+LGW A   +K+MC+DTW WQS +P GY
Sbjct:   64 VLVTGGAGYIGSHTCLELLSENYNVVVVDNLDNSSEESLRRVRKLTSCGEDRLCFRNCDIRDRKGLEKILKDFPDISSCIH--FAGLKAVGESVAKPLMYYDC---NISGTVHLLELL-SKHGVKNFVFSSSATVYGDPEMLPVTEAAKLSA--TNPYGRTKLFIEEILRDCYAADETWNTLILRYFNPIGAHPSGEIGEDPQGIPNNLMPFIAQVCVGRREKLSVFGDDYDTPDGTGVRDYIHVVDLAKGHVAALDTLYNQKVGCRAVNLGTGKGVSVLELVKGMGEATGTPVPYEIAPRRPGDVASVYADPTLAEKLLGWKATLGVKEMCEDTWNWQSNNPYGY 401

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A7S3PWY3_9STRA (UDP-glucose 4-epimerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWY3_9STRA)

HSP 1 Score: 386 bits (992), Expect = 1.460e-122
Identity = 211/383 (55.09%), Postives = 268/383 (69.97%), Query Frame = 1

Query:  190 VVLTATAAACLSSMHGGKAMAFAAR------VLVTGGAGYIGSHTCLELIKAGEK--VVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQ--VRNFLLYTPPLRGVMGRFFRGTSQMAPFLLPSHLHTSASRN------NIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPS-WDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGYLEA 1287
            +++T T +  LS +    A+AFAA       VLVTGGAGYIGSHTC+EL++      VVVVD+L NS  ESL RVRELT C DD+L FR   +R+    +  L  V+  F  G      F     +  S S        NI GT NL+E + ++   R  VFSSSATVYG+P+ LP+ E S +    TNPYG+TK  +EEIL+D   ++P+ W+IL+LRYFNPIGAH SGR+GEDP GIPNNLMPF+AQVCVGRRE LSVFG+DY+TPDGTGVRDYIHV+DLA+GHVAA+ KL     GC  +NLGTG G SV+E+V+GM  A+GKPVPY++ PRR GDV S+YADP +A++ LGW+A   + +MCDDTW+WQS +P GY++A
Sbjct:    8 ILVTTTISIVLSQIFLPLALAFAASPGGPRTVLVTGGAGYIGSHTCVELLQCDSNYNVVVVDNLDNSSLESLQRVRELTGCSDDKLQFRNCDIRD----SDTLEKVLDEF-PGIDSCVHFAGLKAVGESVSNPLAYYDCNIGGTTNLLEKLSSRN-IRHFVFSSSATVYGDPETLPIQEDSKLTA--TNPYGRTKLFVEEILRDCYVSNPTMWNILILRYFNPIGAHPSGRIGEDPQGIPNNLMPFIAQVCVGRREKLSVFGDDYDTPDGTGVRDYIHVVDLAKGHVAALDKLYSEDLGCEAVNLGTGNGCSVLELVEGMSKATGKPVPYEISPRRPGDVASVYADPKMAKERLGWTADLGITEMCDDTWRWQSTNPLGYVDA 382

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: B5Y3S0_PHATC (UDP-glucose 4-epimerase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3S0_PHATC)

HSP 1 Score: 381 bits (979), Expect = 4.580e-121
Identity = 198/349 (56.73%), Postives = 252/349 (72.21%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIKAGE-KVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQ--VRNFLLYTPPLRGVMGRF--------FRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGY 1278
            VLVTGGAGYIGSHTCLEL+++   KVVV+D+L NS EES+ RV++LT C  D L+FR   +R+       L+ V+  F        F G   +   +    ++      N+ GT+ L+E +   +G +  VFSSSATVYGEP+ LPL E + +    TNPYG+TK  IEEIL+D   +D SW+ L+LRYFNPIGAH SG++GEDP GIPNNLMPFVAQVCVGRRE LSVFG+DY+TPDGTGVRDYIHV+DLA+GHVAA++KL     GC  +NLGTG G SV+E+VKGM  A+GK VPY++ PRR GDV ++YAD SLAQ++LGW A+  +  MC+DTW+WQS +PNGY
Sbjct:    9 VLVTGGAGYIGSHTCLELLESKTYKVVVIDNLDNSSEESIKRVQQLTACGKDDLVFRNCDIRD----RRRLKAVLDEFPNISSCIHFAGLKAVGESVSKPLMYYDC---NVGGTVQLLEQLN-NKGIKNFVFSSSATVYGEPEMLPLVETARLQA--TNPYGRTKLFIEEILRDCHASDDSWNTLILRYFNPIGAHPSGKIGEDPQGIPNNLMPFVAQVCVGRREKLSVFGDDYDTPDGTGVRDYIHVVDLAKGHVAALEKLYSDQVGCRAVNLGTGQGVSVLELVKGMGKATGKAVPYEISPRRPGDVATVYADASLAQELLGWKAELGVDAMCEDTWRWQSTNPNGY 347

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BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Match: A0A1X6NRK4_PORUM (UDP-glucose 4-epimerase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRK4_PORUM)

HSP 1 Score: 379 bits (972), Expect = 3.080e-120
Identity = 196/349 (56.16%), Postives = 244/349 (69.91%), Query Frame = 1

Query:  265 VLVTGGAGYIGSHTCLELIKAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLRGVMGRF-------FRGTSQMAPFL-LPSHLHTSASRNNIEGTLNLVECMQAQEGCRKLVFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADPSWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVFGNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGYSVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRNLKDMCDDTWKWQSAHPNGYLEA 1287
            VLVTGGAGYIGSHT LEL+  G   VVVD+L NS EESL RV ELT    DQ++FR V   LL    L  V   F       F G   +   + LP   +     NN+ GTL L+  +  + GC+  VFSSSATVYG   ++P+ E + +G   TNPYG+TK  IEE L+DL++A   W+IL+LRYFNP+GAHESGR+GEDP GIPNNLMP++AQV VGRRE LS+FG+DY T DGTGVRDYIHV+DLA+GHVAA++KL D   GC  +NLGTG GYSV++++ GM  A G+ +PYKM PRR GDV  +YADP+ A+  LGW AK  +++MC+ TWKWQS +PNGY  A
Sbjct:    6 VLVTGGAGYIGSHTVLELVNEGFTAVVVDNLDNSSEESLKRVSELTG-KSDQIVFRHVD--LLNEEALEAVFKEFTFSACIHFAGLKAVGESVKLPLKYY----HNNLTGTLILLNLLD-KYGCKNFVFSSSATVYGLVKEMPVLEDAEIGA--TNPYGRTKLFIEEFLRDLSRAQEEWNILILRYFNPVGAHESGRIGEDPSGIPNNLMPYIAQVAVGRREHLSIFGDDYPTKDGTGVRDYIHVVDLAKGHVAALEKLTDEKVGCKSVNLGTGKGYSVLDMLNGMSKACGRELPYKMAPRREGDVSVLYADPAFAKSFLGWEAKLGVEEMCESTWKWQSNNPNGYKTA 344

The following BLAST results are available for this feature:

BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot

BLAST of mRNA_S-latissima_F_contig10.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FL43_ECTSI	9.440e-192	74.61	UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YLY8_9STRA	9.130e-154	69.03	Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus...	[more]
A0A6V1XCR0_HETAK	6.620e-134	59.32	UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashi...	[more]
A0A7S2W7X1_9STRA	1.280e-126	57.88	UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina ma...	[more]
A0A4D9CZK9_9STRA	1.660e-125	56.04	UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A1Z5JWU5_FISSO	3.860e-123	57.88	UDP-glucose 4-epimerase n=2 Tax=Fistulifera solari...	[more]
A0A7S3KXG9_9STRA	1.170e-122	56.65	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S3PWY3_9STRA	1.460e-122	55.09	UDP-glucose 4-epimerase n=1 Tax=Chaetoceros debili...	[more]
B5Y3S0_PHATC	4.580e-121	56.73	UDP-glucose 4-epimerase n=1 Tax=Phaeodactylum tric...	[more]
A0A1X6NRK4_PORUM	3.080e-120	56.16	UDP-glucose 4-epimerase n=1 Tax=Porphyra umbilical...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-latissima_F_contig10	contig	S-latissima_F_contig10:935814..948899 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90	2022-09-19
OGS1.0 of Saccharina latissima SLPER63f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	563.9
Seed ortholog evalue	5.5e-158
Seed eggNOG ortholog	2880.D7FL43
Preferred name	UGE1
KEGG rclass	RC00289
KEGG ko	ko:K01784
KEGG Reaction	R00291,R02984
KEGG Pathway	ko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG Module	M00361,M00362,M00632
Hectar predicted targeting category	signal peptide
GOs	GO:0000271,GO:0003674,GO:0003824,GO:0003978,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0006073,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009555,GO:0009653,GO:0009832,GO:0009888,GO:0009969,GO:0009987,GO:0010015,GO:0010053,GO:0010383,GO:0010410,GO:0010411,GO:0012505,GO:0016020,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0022622,GO:0030154,GO:0031984,GO:0032501,GO:0032502,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0050373,GO:0071554,GO:0071669,GO:0071704,GO:0071840,GO:0071944,GO:0090558,GO:0090627,GO:0098791,GO:0099402,GO:1901576,GO:1905392
EggNOG free text desc.	racemase and epimerase activity, acting on carbohydrates and derivatives
EggNOG OGs	COG1087@1,KOG1371@2759
Ec32 ortholog description	galactose-4-epimerase, UDP
Ec32 ortholog	Ec-05_006710.1
EC	5.1.3.2
COG Functional cat.	M
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000
Exons	8
Model size	2807
Cds size	1119
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-latissima_F_contig10.30.1	prot_S-latissima_F_contig10.30.1	Saccharina latissima SLPER63f female	polypeptide	S-latissima_F_contig10 935985..947382 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815359.1300347-UTR-S-latissima_F_contig10:935813..935984	1622815359.1300347-UTR-S-latissima_F_contig10:935813..935984	Saccharina latissima SLPER63f female	UTR	S-latissima_F_contig10 935814..935984 +
1693924824.9563959-UTR-S-latissima_F_contig10:935813..935984	1693924824.9563959-UTR-S-latissima_F_contig10:935813..935984	Saccharina latissima SLPER63f female	UTR	S-latissima_F_contig10 935814..935984 +
1622815359.223518-UTR-S-latissima_F_contig10:947382..948899	1622815359.223518-UTR-S-latissima_F_contig10:947382..948899	Saccharina latissima SLPER63f female	UTR	S-latissima_F_contig10 947383..948899 +
1693924825.2484708-UTR-S-latissima_F_contig10:947382..948899	1693924825.2484708-UTR-S-latissima_F_contig10:947382..948899	Saccharina latissima SLPER63f female	UTR	S-latissima_F_contig10 947383..948899 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-latissima_F_contig10:935814..948899+
coding sequence from alignment at S-latissima_F_contig10:935814..948899+

protein sequence of mRNA_S-latissima_F_contig10.30.1

>prot_S-latissima_F_contig10.30.1 ID=prot_S-latissima_F_contig10.30.1|Name=mRNA_S-latissima_F_contig10.30.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=373bp
MRSPPMVVLTATAAACLSSMHGGKAMAFAARVLVTGGAGYIGSHTCLELI
KAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRQVRNFLLYTPPLR
GVMGRFFRGTSQMAPFLLPSHLHTSASRNNIEGTLNLVECMQAQEGCRKL
VFSSSATVYGEPDKLPLDEHSSVGVGITNPYGKTKYMIEEILKDLAKADP
SWDILLLRYFNPIGAHESGRMGEDPGGIPNNLMPFVAQVCVGRREFLSVF
GNDYNTPDGTGVRDYIHVMDLAEGHVAAVKKLRDSCTGCVPINLGTGVGY
SVMEVVKGMEDASGKPVPYKMMPRRAGDVESMYADPSLAQKMLGWSAKRN
LKDMCDDTWKWQSAHPNGYLEA*

mRNA from alignment at S-latissima_F_contig10:935814..948899+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-latissima_F_contig10.30.1 ID=mRNA_S-latissima_F_contig10.30.1|Name=mRNA_S-latissima_F_contig10.30.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=13086bp|location=Sequence derived from alignment at S-latissima_F_contig10:935814..948899+ (Saccharina latissima SLPER63f female)
GCGAGAACAATCAAACATCTGTGAAAACCACGATGAATTCACTCCAAAAC
GAAGCCAGGTAGGTCACCGTCGCCACTACAGGTACACTCGTAGGTAACAG
CTGCTGTTTCGAACGAGGGGAAGAAGGGCGACCACCAAAGCGAGATAAGT
GACATCAGACTCAGGCCTACCATGCGTTCTCCACCGATGGTGGTGCTGAC
CGCCACGGCTGCGGCGTGCCTTTCATCGATGCACGGTGGAAAGGCCATGG
CTTTTGCGGCGAGAGTGCTTGTGACCGGCGGCGCTGGCTACATCGGGTCG
CACACGTGCCTTGAGCTCATCAAGGCGGGGGAGAAGGTGAGAGGCTAGAG
GCTGCTGTCGCGCTGTTACCCATCTCTCTGGCCCGGCGTGACTCCCATGC
TCCGCTGCTATCAACGAGTTAACTGTCCTACACAACTCTGAACGGCAGCT
CACTCGTACTGACTGCTGTACAGCAGTATTACACTCACGAGTACGGGCAA
GTAGAAGGCGCGATATAATTCGCTATTGTTCTTTCGCAAGACTTGGGCTC
CTGAGCAGTGTGTCCAATGCCCCAACAATGATGCTGTGAGGCCTGCATCT
ACGACTATTAATACGCGCTCTACCAGGGGACTGAGTGCTGCTATTAATAC
CAGCCTTAGTCGGTTTGCATCCTGTCAGAGAGACGAGTACAATCGTGCGC
TCATCCGGCAGAGTTGACAGCAGTAGTGGTGGCTTAGACTTCTGCCCGAA
CTTGGCCTGGACAAGCCGACAAGCCGTCGAATACGAGCGGACAAACCTTG
AGTTTTACGGGGATCGTCGTGTAGTGGTCGGGTGATAGTCGGGTGATGAG
CTGGAACTAGAGTGACGCTTTTAGCAGGTCGGGTGGTGCTTTTGGCGCTG
TCCACTCTGTCCACTACTACTGTCCAAGAACCTACCTGTATGACAGGATA
TCATGATATGATATCATACTCCCGAGTCTCCGAGGGTATGTACAGCAGGT
ATACACGGCTAGCACTAGCACGCGTATACGGCAGGTTATCATCTTATCAT
AACCAGTACGTACCTGTTACCCAGGGTACGAGTATACCTATGATTATGAT
ACATAGCGCGCCAGCAATCCGCACCTGCACTCGTACGCGTACAGCGTCAC
GGTTATATGTACAACAACGGTAGAATAGCACGGCGGTATCATAGTACCCG
TGTCTCTTACCAACTAATGTCTGCACGACGGCGGTTGTGTCGCATAGTGT
ACGTACGTCCGTCCGTACGTAGCGTCGGGCTGCACTTGCTGCGCAATACG
CAGCAGTAGTTTACACGGCCTGATAAAGTTGAGATCCATTTCGAGCTCTC
GCTGAAGCCGGATTCTACGAGCGCCGACCGGCATCTCTAAAAAGAACGAA
ACCAGGGCCGTCGCTTTTTTTGTTCGAATAATCACGACAGACCCACAGAT
CACATATGATATGATACCAACAAACCAGTCCAACACAAGAGACACAGCAA
ACAGCAACCTGTGCGAATAATACTCGTAGCGCTTATCAACACCGAGAGTC
CCGTGGAGTGTTTCATATTCCTTGGGAGCTTTAAATCGAAGTCCATGGGA
TATCCCATGGGATCCCATTGGACAATTATGACCCCATGGAACATCCCATG
GGACAATTTATGACCCCACGGGACATTCCATGGGGCAAAGGTTACCCCAC
GGGACATCCCATGGGACACAGGTGGCCCCATGGAACATCCCATGGGACAA
TTTTGACCCCATGGGACATTCCATGAGACAGTTGTGACCCCACGGGACAT
CCCATTGGACACACATGACCCCGTGGGACATCCCATGGGATGCGACAAAC
ATGACCCCACGGGACATCCCATGGGACACAGGTGGCTCCATGGAACATCA
ATGGGACAATTTTGACCCCACGGGACATCCCATGGAACACATATGACCCC
GTGGGACATCCCATGGGACAAATATGACCCCGTGGGACATCCTATGGGAC
AAATATGAAGCCCATGAGACAACCCATGGGACAGGTATGACCCCACGGGA
CATCCCATGGGACAGTTATGACCCCATGGGACATCCCATGGAAGAAATAT
GAACCCCATGGGACATCCCATGGGAAAAATATGACTCCATGGGACACCCC
ATGGGACAAATATGAACCCCATAGGACATCCCATGGGACAAGTATGAAGC
CCATGGGACAAAACCAGGTGATGGGACTTGACCCGTCTTGTGCGAGTCCT
GTGTGCGAGGGCAGGCAGGTGCGCAAAGAAGACCGACCCGACCTGTTCTC
TAGGTTTTGTGCTGCCATTCCTCGTGTGTACAAGGTATATACCGTCCATA
TGCCGGTATCCGCCTACTAGACTAGCCCAGCATGGGCATTCCTCCGACAC
AATTTATTTGGATCACCCCCCTCCCACTATCGTACATACATACGCACATG
AGCGCTCCATACGCCGTGGAGAGAGAGGCGAAGGCAAATTTCAGCTTGAT
TGATTGTTCGTTTTGACGAGTATGTACAGCAGCGAACATCAGTTCGATCA
CCTAGGTACCTCAAGCAAGAGCTACAAGAGAGCGCACAGCAGTGGGCATG
ACACCCAAGCTATTAAATAGAGCGCGTTGTTTGTATCTCTCCTATACGAG
CACTCTCTCTACCTCTCTATTAATAGGTGCCGTCGATCCTAAAAACGTCG
AGGCTTTCGCCGCCAGCAGCGGTAGGGTGAGCCATGAGTAACGATGGAGG
CCATGAAGCTGGATTCGTAGAGCCTTGAGTCGGCAAGATTTCACGACTAG
TACCTAATCGGCAGGTGCTTTTAGCCAACTAGCTGACTTTAGTCGGCAAA
AGTCAGCTGGCGAAGCCAGCTGATGGCCAGACGACTTGCCGACTTAAGTC
AGGCGAGCGAAGCGAGCCAAATCAGCCCCCCCCGGCCGAGCCCCCCCCCC
CCCCGCCCAAAAAGAAAACATGCAACCCGCATTCGAGATTCTTACCATTT
CTACATGTAAGTATGGAACCCAGTTAAGTCGGGTAGTCGGCACCTCCGGT
ACGCGACTACCGGTAACTTTTAGTCGTCCGGTTAGTATTCGACGTGTTTT
ACAACCCGAAATCCCTGAGGGAGATCGTACCCAGCAAACAAAAGAAAGTA
GTATATACGCTCGTACATATATACGGCCTACAGTTCTCTCGGAGGACCAA
GCCTCCGAATGCTGTTCGTTTTCTGAGTCGTGGGAGAAAGGGCTTGTTCT
CCCCTCGGCTAGATTCCTGTATCGCAGCTTCCTGCAACCCCCTGAGTTTC
TCGACCGCCCGATTTTACCGTTTGGTCTGGCTGGTCGGATGATCTCTCCC
TACCTTATTTACTGTAGGTGGTGGTTGTGGATGACCTCAGCAACTCCGTG
GAGGAGTCGCTGAACAGGGTGCGCGAGCTCACCAAGTGTGACGACGATCA
GCTCATCTTCCGACAGGTGAGAAGTGCAATCGCTTATTTTGAGCTGCCCC
AGGCTAGATTTCTTATTTTGAGCTGGCCCAGGCTGGAATTTCTTGTTTGA
CCTGTGGCCCAGGGTAAATTTCTGATTTGAGCTGTCTCAGGGTAGATTTC
CTATTTGAGCTGACCCCGGCTAGGTTTCTTATTTGAGCTCTGGCTCAGGT
TATATTTCTTAATTGAGATGGCCCAGGCCTACATTTCTTATTTGAGCTGG
GCCAGGCTAGATTTATTATCTGAGCTGTGACCCAGGGTAGATTTCTTGCT
TTAGTAGGCTCAGGCTAGGTTTCTTATTTGCGCTGTGATCCATGCTATAT
TCCTTATTTGAGCTGGCTCAGGCTATTTTTCTTATTTGAGCTGGCCCAGG
CTAGATTTCTTATTTCAGAAAGGGTGTATGTTCCACTATTTTTTTAGTTT
AGCCGCTCTCGAATTTCTTGTCTCCCTGCACCCAAGTGTAGAGTGTGATG
GTTACCAGCTCATCTTCCGGCAGGGAAGAAGCCTACACTGTAGTTTTCTT
ATTACAAATTTGCATCTTGTTCTTTTCGCTAAAATAAACGGGGGGGAAAC
GCGAGGGAAAGCTTTTGAAACGAACAAACTCGAAACAGTCGTTCATACAA
ACCAAAAGACATGGGGTGTGGGCGCCAGTGGATGGAGAGAGAAAACACGC
CTTCGATATGGACGAATTTATCGAAAGCGATTCCGCTCTCCCAAACAAAC
CTGGTTTCCTTTCCCTTTCTTTTATTCCCACGAGTATTTTAGTTTTTTCC
CCTCGATCTGTATATACCTTTTTTCTTCCCTGACACTCGAGAAATATTTC
AAGACACGTCGAAACTTTCCAAGGTTATGTTCTGTAGGGTACCTACAGAA
CCATACCCGGGGTATTTACCCCGGGTATTACCCTACAGAAAACTTCTGTG
AGTTCTGTAAGGGTTTTTGATACCCTTCCCCGAATTCTTAATTCGAAGAC
CTCAACCGCCCCCGAACTTCGTAGTCTGTACCCCCTTTTTCACAATACCC
GGGGTACCGGTACAACTTTTTTTTGTCCCTGCCCAAAACTTCTGTGGTTC
TGACCCCCTGTGTAAAAACCCCGAATTCTGTGGGTTCTGAACACTTCTAC
CCGACCCGGAATTTCTGTGAGTCTGTACGACTTTCAACCCCGTACCGGAA
CTTTTTTAAAGTTTTACCCCTTTGCCCAAAAAACCCCGGGGGTGGGGGTA
TCCCTTTTGTCCAATACCGGGGGTCCGGTCCCCTATTCGGGTTAACCATA
CGTACCCGTACGTTTTACATTATACAACGTAATTTTGAGCTTTTTTGTGC
TGATACTTGGTTTCGCCCCCCAAAATTAGCATAGCGGTAAAACGTGTTAA
ACGGGTGCATGACAAACAATTATTTCCTTATTTATTTATAGGGGTGCGGT
TTTGCCGTATCGAAATCCCCACCTACAGAAAACTATCTATCGGTATCCAC
ACATGCCGAAATTTTAAAACCCCGGGTTGTATTGTTTTTTTTTAAATACG
TACCAGGACCGGTATAAATTCGTATAAATAGGTTTACTCGTATTATACCG
AAAAAATTTTACGTAGTTTTTTGTAGGTTGTAATACTTATACCGGGCCCG
GCAAATTCCGACAGCGGCGATGGAGGATCTAATTATCATATCGTGCCGCG
GCCCCCCGGCTTCCCCGGTTCCCCGCGAGATGGGGTTTTTCCCCACCGTG
TATGCACGAACCGGATTCCCGGTCCCGGCTTGGGGGTTTGTGGGGGGGTT
CGCCCTTTTGCTGCTGTTTTTTACGAGTTCATCAACCCTTTTACTAGAAC
CGCAAATAACAAACTTTTAAACAGGCCCACAAACTAAAATTTTAAAAAGC
CGTCTGATATTTAGGGAAATAATAAATTCGAGGTCTTTTAATTGAAGTTT
GCGTTGAAAGAAACCCTCTTCAAAAGAAATGCAGCCTTTTCCCTTTTCCC
GTTTCTTTTTTAAGGGGTCCGGTACACTGCTGTACTGGTATAAAACTTTG
CAAGATTGTTTCTAAGGTTACGTAAAAAACCCCTCCCGGGTTTTTTCCCC
CGGTATTTTACCCACAAAGAAATTTTGGGTTCTGTGCGACACTCTAAACC
TACCCCCAAATTCTGTAAATTTTTGTACCCCGTGCCCAATCCCGGGGGTA
CGGGTACAAAGTTTTATACCCCGGAAATTTTTGTGAGTTCGTACGCCCCC
CGCCACAATACCCGGAACTTTTTTCTGAAAACTTCATTACCCGGAAATTC
TTAAGTTCGTACACACTATACCCCACCCGGGAACTTTTGTAGTTTTGTAC
GCCCCGGGCCACAAAACCCCGGGTAAGGGTCAATTTTCAGACCCGCACGG
AACTTCGTGAGTTCTGTACCCGGGCACAAACCCGAAATTTTTGTGATTCT
GTAACACTTTCTACCCCCTCCCCAAAATTCTTAAGTTCTTAAAACCCCTA
CCCCGTCCCTAAAACCACAAACCCACAGAACCTGACCTTGAAAATTTCGG
TATCATGAACAACAAAAGCTACAGCCAGTAGTCCCAACCCTAGCTGCCGC
GTTTTCTTTTTCTCTCCCCCCGGCTGCGTCCCCCGGTGTTTTTTTTTCCG
CCTGTCCCTTCGCTATATTTACCCCGGCGGAGCGGGACCTCCCGGACCGA
AAAGGGGTTTTCAAAAGGTTTTTAACACTAATTCGATCGGCGGCCTTTGC
ACCTCAAGGCCCCTGGGGGAGCGGGGGGGGGGAAACCGTTACTCTACTAC
CGGGGGAGGGGGCACCCTCCCCCCGTGGCCACCAACCGGGGATACATTCC
CATCCCCGGTTTTTTTACGGCTCCTGCATTGTTCGTGTTTCGTGCAGTTC
GACATTTTTTTCTTGCTCCCATGCAATTTTGTCGCCAAAACTATTTTTCA
TTACGTACGAGTATATACTAGTTTTTGCAGCAGTAAAAGTGCTAGGAAGA
GCGTGGAGAAGCCGATCATCAATTACCGATCAGGGGCGATGCTTGCGGCC
GGCCACCAGACCGGGGATAGGATTGCACCGTCCCCGTTTTTTTATGTTTT
TTTTTTTTCGCCATGGGGGGGGCCTTTGACAACCTGTGGGGGAAGTGTAA
GAACCGTGCTTTAAAACCCGGGGAGGTGACCTTGCCGCTGGGTTCCAACC
GGAGACCCAACCCTCGACTGCTACTCGTCTGAATGCTACCCGCTTGCTGC
TGGTCTCTGACTGCTAGCTCAGTCTGACTGTTAGCCCAATCGAGCTAATA
CCCAAACTAAGCTTAAATAGCCCCTTATAACTCAGTCGACCCCTTAAAAG
CCCATCTGCTACGCGTATCTACGCCCGTCCACCCCCTAGCTCAGCAATGG
TTTACCCCCGACCTTTTTGTGCACCCTTTGGTCTTAATAGAATTAGGAAC
CCAAACTCGCAAAGATGATTTTTAGGAAAAAATTTCCCCCCTCACACTGA
GGCCTTTATTTTTTTCAGTTTTTTTCAAATAAAATATCTAACAAAAGCAC
AGTCCGGGGCCCTCTCCCGATCCCCGGACCCCGGTTTTCCCCAAGGCTGC
ACCCCTTTGCTCGGGCTATGGTCCGCAGCACGCCCCCCCTACGGGGGGTT
ATGGGCCGTTTCTTTCGGGGGACCTCACAGATGGCGCCCTTCCTCCTTCC
TTCCCACCTGCATACCTCTGCCTCCAGAAACAACATCGAGGGCACGCTGA
ACCTGGTGGAGTGTATGCAGGCGCAGGAGGGTTGCCGCAAGCTAGTCTTC
TCTTCCTCCGCCACGGTCTACGGAGAACCGGACAAGCTGCCCTTGGACGA
GCACAGCAGCGTGGGCGTGGGCATCACCAACCCTTACGGTAAGTCCCTGC
TGTGGGTCTTCTTTCACCCCATTTGAGTTTTGTTTAGCCTTTCCTGTGTG
CGCTCGGAGTCCCTACCCGTCACGAACATACGTATATACGTGCCTACTGC
TTGCTCCCGCACCAACGATAGTACGTACGTACCTACTGCTGCCTGTAGTG
CGTACCTACTGCTTGCTCCCGCACCAACGGTCGTACGTACCTACGGCTAT
TGTAGTCCGTACCTACTGGTACTGAAGTCCGTACCTACTACTGAAGTCCG
TATCTACTGCTACTGAAGTCCGTACCTACTGCTACTGAAGTCCGTACCTA
CTGCTACTGAAGTCCGTACACTGCTGTTGTAGTCCGTACTTACTGCTGTT
GTAGTCCGTACCTACTGCTACTGAAGTCCGTACCTACTGTTTGCTCCCGC
ACCAGCGATAGTACGTACCTACTGCTACCTGTAGTGCGTACCTTGCTTGC
TCCCGCACCAACGGTCGTACGTACCTACTGCTATGGTATTCCGTACCTAC
TGCTACTGAAGTCCGTACCTATTGCTTGCTCCCGCACCAACGATAGTACG
CATATACTTGCTGCTGTTGTGTCCGTACCTACTGCTACTGAAGTCCGTAC
CTACTGTTTGCTCCCGCACCAGCGATAGTACGTACCTACTGCTACCTGTA
GTCCGCACCTTGCTTCCTCACCAACGATAGTACGTACCTACTGCTACTGT
AGTACGTACCTACTGCTTGCTCCCGCCCCAGGGAGGACGAAATACATGAT
CGAGGAGATTCTGAAGGACTTGGCCAAGGCGGACCCCTCTTGGGACATCC
TCCTGCTCAGATATTTTAACCCCATCGGGGCTCACGAGAGCGGACGGATG
GGGGAAGACCCCGGGGGGATCCCGAACAACCTCATGCCTTTCGTTGCTCA
GGTGGGTTTCTATATGGCATTTTTTATGCGTTTTCGTTTTTTTTTGCTGG
GGGCGGGGTGGGTTGAGGGTACGACCTCGGAGGGGTCCCGAACAGCCCTA
TGCCTTTCGTTGCTCAGGGGAGCTTCTAGTTTATATTCAATGGTGTGCAT
ATGGTTGGGCGAGTCGACGAGGGAAGAAAGGGCCGAAGTCTTCTCGCGAT
AAAAATGCAAGGAACGAACCGCAGTGTGTGGGGAGGAGGGAGAAGAGCCT
GCTTTGTGATGACCCCGGATCTGAGTTACGACTGTCACAATAGGAAGGAG
AGAGCAAATAAAGGCGAAGATAATAAATGGGATGGGGGGCAATAAAGTGG
TGTTATTTATGCGTTCTTGTTTCGAGGGGGGGGGGGGGGGGGGCTACGGG
TAGGGGACCCCGGCGGGGGGGGAGGGGTCCCGAACAACCTCATGCTTTGT
TTTGCTCAGGTATATATTTTGCGGTGTGCACCGACTTTGGGGGGGGGGGC
AACAAACTCGTACTTGGAATTTGTGTAAGGTATTTTTTGCGGTTTCCAGC
CACGTTTTGCGACAAAAGTGTTGAGTCGTTCTTAACAACTCCTTCAGGGC
TGCCTGCCTGCACCCACATTGGAAAAGGACTTAGAATTAGTGTGGGATAA
GTTTGAAGGTAGTGTAGTGCAAGGTTTCAACACCTGTATAGGACAGATCA
TCGATTCCTGCTTCATGATCGAGATCATTCAGGGCAGAGCTATTCCTGAT
CTGTAGGATCTGTATGATCTGTATGATCTGCATGATCTAGCTCATGTTGC
CGGGTGGGAGCCCTGTAATCTGCGTGAATAAGGACATGGTTTCCTGCATT
GGATCTGCAGTATACAGACCCTGAAAATCATATAAAAACGGCTGGCTAGG
ACCTAGATCTATCTGTAGATGACCTATCTGTAGATGATCTATCTGTAGGC
GATCTGTCTGCAGGCGATCTGTGTGAGGCGTAAAATGTTTTTAATGTCGC
CGTCCCCTCCGACGTGCTGCCTGCTGCACATCAGGTGTGCGTGGGCCGGA
GAGAGTTTTTAAGCGTGTTCGGGAATGATTACAACACTCCTGATGGCACT
GGGGTGAGGGATTACATCCACGTCATGGACCTTGCAGAGGGGCACGTGGC
TGCTGTAAAAAAGGTAAGGTTTTCAATCGAAACGCATCAATTAGAATCAA
GTCAAACCGAATACCGGTAGCTTTTAACCCATTCAGAACTGGAAAAATTG
CCCTACACTAATTCCAAGTAGATTGTCCCCAAATTCGTGGGACCAGTTCT
TAAGGGATTAAGACCTAATTGTATTACATCGAATCAAATTAAGTCAAACC
AAACCATATCAATCAAATCAATAATGGATCAGGATTGTTAGTGACTTGCT
TCATACTAAGCTAGCACCATAACACTTGCCCCCTATTTTACCGTAATCTC
CTCCATCCTTTGTTCGCTGCATGCAGTTGAGGGATTCGTGCACTGGGTGC
GTTCCGATTAACCTGGGCACCGGAGTGGGGTACTCCGTCATGGAGGTCGT
GAAGGGAATGGAAGACGCTAGCGGCAAGCCGGTCCCGTACAAGGTGGGCG
TGACGTTGTACTGGCGGCATCGTACTAAATATTTGTTGGCCACATTGCGT
ACCTCTCTGTCGGGAGCCGTATGCCGAGCATTACCCGCTCGGTCCTTACA
CTTCTTTCCGGACAGTAATGGTTGTGTGTGTGTTTTGTTTTTCTGACATT
TTTTTGTTCTTCCCCTCCATACTTGGTGGAACCGTGCCTTGCGTGACAAG
TGGCTTATTAGATAATGTCCATCAGTTTATGAGAGAACAACTAAAACAAC
GACAACAATAACGACGACAACGACAATAACGACAAGCAACAACCATCCAT
TCCCCGACACGTTGCAGCTCTACCTCCACGGCAAAGGTCCGCGGCCATCC
ACTTCAAGTTTGTGTTCGTTCTTGTTTCCAAGCTCTGTGTGCGGGTATCG
ATCGATCCAGAAAACCGACCCCCCCCCCCCCCCTAAATCCTCTCATATCT
CCGTACCACGTGTGCATCTGTTCAGACAACCCCTCCCCCCCCCCCGTCTA
TTATGTTGAATGCGTTTTATTTTTCAGTATTTTTGGCAACTTCCTGTACG
CGTTTTTTTTCATTTCTTTTTGTACTGCCCGCGCATCTGGCTGAGTATAT
AATCATGGCTGATATGCACATATTCATGGATGATAGGTCAATCAACACCG
GTGGTACCCTGGAAAATGCGGTGCGATTGCTATATCCTGTTATATATAAC
CAGGTATATATATATATAGGTTGGGTTGGCGTCGGTTGGCGACCACGCCG
TAAAACACGCGTCTCACTGCGTGAGATAGACAACCAGGGTGCTGTTTTTT
TTTGGCAGTCACCACGGCTGGCGGTCGAGTTAGATCATGTGTGCGGAGTG
GAGAACCTTAACTCCGCACAAGCGGAATTATCGTATCACGTAGTGTGTAT
ATGATAAGGCGCCCACGAGGCAGATACATAGTAACACCCATTGTTGTCTC
TGGAAATGTCCATAACATAAATCAAATCTATTCATTGGAGGCTGTCGTCC
ATTATGCAAGCCCGCCTCGCAAGCGGTTCTTAGTAGGATGCAGCTCACCC
TTCATGCGACTGGCCCAACACCTCACGGCGCTTCGCGCTTGGTGCAAGCA
ATGTCTGCCTTGTTGGTGAAAACCCACCGTGCTCCGTCCCGGCATTGTAG
GGATGCGAGGATCTCTGGTCACACGACTACGGCCATGCACGACATGAGTA
CACCGTCCCCCCCCCGCCAACGCTTGGTGCTAGCAATGTCTACCTGGCCG
GTGAAAACCCAACGTGCTACATCCCGGCATTGTAGTGATGCGAGGGTCTA
TGGTGATACGACGACTACGGCCGTGCATGACTTGAGTGTACCCCCTCATG
CGACTCGCCCAACACCTCACGGCGCTTCGCGCTTGGTGCTAGCAATGTCT
GCCTGGTCGGTGAAAACCCGTCGTGCTCCATCCCGGCATTGTAGTGATGC
GAGGGTCTATGGTCATACGACGACTACGGCCGTGCATGACATGAGTACAC
CCCCCCCCAAAACCCCAACCTCCCCCCTCCCCCCCCCCACCCCCCCCACC
GCCCCCGCAGATGATGCCACGCCGAGCGGGGGACGTGGAATCGATGTACG
CGGATCCTTCGTTAGCACAGAAGATGCTCGGCTGGTCTGCCAAACGGAAT
CTCAAAGACATGTGCGATGACACGTGGAAGTGGCAGAGCGCCCACCCCAA
CGGTTATCTGGAGGCGTGATGTTGGAGACAATTAGTTTATTTGCTGATGC
TCAAACGGCTATCTACCTGGAGTCGTGTTCGGAACAGGGGCTTTTGGTCT
GACCTCAACGGCTAAGTCGGGAGGCGTGATGCTGGAGACAGAGAATTTGT
TTGCTGACCCCAACGGCTATCTACCTGGAGTCGTGATGGGGGCAGGGGAT
TTTTTTCCGACCCCAATGGCTGTATCTGGGGGGGGGTGATGAGAACAGGG
ATTTGTTTGCTGACATCCCCTTTTTGGGCTTTTTTAATCCGACATTTTCA
TTTTATTGTTCGTGATCGTTGTTTTACAGTACCAGGGTACACCAGTACCT
GGTATGATTTATGGGATGGTTGTGGTCAAGAGGTGGTAGAGCGCCCACCC
CAACGGCTATCTGGAAGCGGGAGGGAGACAAGGCATTTTGTGCTGACCCC
AACGGCTATACTTGGAGGCGTGATGGAGACTGGGTGTTTCTTGCTAACAT
CCCCTATTTGATCCGGTATTTTCATTTCCCTATGCGGGGGTAGTGATATA
TGGGGTGGGTCCGACAAAATAGAGGTGGAAGAGCGTCCACCCCAACGGTT
ATCTGGAGGCGCGATGGATACAGGGCATTTTTTCCTGACACCATCCCCTC
CTTTGTTCCGATATTTCATTTTTTTGTGCGGGGTGCTTAGTGATAAGGTG
GGTACAATCGTGTGTTCCTAGTGGTAATGAGGCGGTGACAGTGCTATGGA
CACCCCGATCACCTAATAAATATAGTAAGGAGGGTCGGGGGTCTGTGGGG
TTTGTAACGGTTCTCCGCTCTTTGTTTTGTCTCACCCTTTCCGCAGTGCA
AAATGTTTCCAAGTCTAATTGAAGGGCATTGGAGCGTGCTTTGTCGCCCA
AATGTGGGAGTTGGCTTGTGCTTGGGGTAAACTAACAGTTCTACGGTAAA
GCTTATCTGTCGGATTTGAGTTTTCGTCGGTAGGATTGAAGCACAGCATG
TAGGCGGGGGGGGGCGTCTAAGCCGCCGCTTGTGGCGCGTATATGCAATC
GAGTTGGCCGAGTTGGCTAGCTTATCCTTAATGACGCATGCTACGGTAGC
ATGTGATAGAGGTGTTGACACCATGTTACAGAGTTTTCTGAGGGTCCTCG
CTTGAGGAGGTCTGATCTAATAGTAAGCCAAAAACTGATTTTGGAGAGAA
ATAAAAGTGCTACCCAATGAACAATACTCCCATAGCCAGACTTTTTATAA
CGAAAAATGTTGCAACACAAAGAATGAAAGTCCAACGATTTTGGGTTAAG
GTAAGGAGCCCCGTCATTCGGAAAAATTTCGGCCAAAAAACGGTACAGTA
CCTCTATTGTAGTACTCGTCAAACACGATTGAGTTGGCTGGAGTGGTTAA
CGTATCCTTCGGGTAAAATGACGGCACGGTTCGTCGGTAAGTTGTCGTCA
GTAGGTTGAAGTATTTAGTCGGGCACACGTAAACCGTCGCTTGCGATACG
CGAATATGATCGAATTGGCTGGAGGTGGTTTGGGGG

Coding sequence (CDS) from alignment at S-latissima_F_contig10:935814..948899+

>mRNA_S-latissima_F_contig10.30.1 ID=mRNA_S-latissima_F_contig10.30.1|Name=mRNA_S-latissima_F_contig10.30.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=2238bp|location=Sequence derived from alignment at S-latissima_F_contig10:935814..948899+ (Saccharina latissima SLPER63f female)
ATGCGTTCTCCACCGATGGTGGTGCTGACCGCCACGGCTGCGGCGTGCCT
TTCATCGATGCACGGTGGAAAGGCCATGGCTTTTGCGGCGAGAGTGCTTG
TGACCGGCGGCGCTGGCTACATCGGGTCGCACACGTGCCTTGAGCTCATC
AAGGCGGGGGAGAAGATGCGTTCTCCACCGATGGTGGTGCTGACCGCCAC
GGCTGCGGCGTGCCTTTCATCGATGCACGGTGGAAAGGCCATGGCTTTTG
CGGCGAGAGTGCTTGTGACCGGCGGCGCTGGCTACATCGGGTCGCACACG
TGCCTTGAGCTCATCAAGGCGGGGGAGAAGGTGGTGGTTGTGGATGACCT
CAGCAACTCCGTGGAGGAGTCGCTGAACAGGGTGCGCGAGCTCACCAAGT
GTGACGACGATCAGCTCATCTTCCGACAGGTGAGAAGTGGTGGTTGTGGA
TGACCTCAGCAACTCCGTGGAGGAGTCGCTGAACAGGGTGCGCGAGCTCA
CCAAGTGTGACGACGATCAGCTCATCTTCCGACAGGTGAGAAATTTCTTG
CTTTAATTTCTTGCTTTACACGCCCCCCCTACGGGGGGTTATGGGCCGTT
TCTTTCGGGGGACCTCACAGATGGCGCCCTTCCTCCTTCCTTCCCACCTG
CATACCTCTGCCTCCAGAAACAACATCGAGGGCACGCTGAACCTGGTGGA
GTGTATGCAGGCGCAGGAGGGTTGCCGCAAGCTAGTCTTCTCTTCCTCCG
CCACGGTCTACGGAGAACCGGACAAGCTGCCCTTGGACGAGCACAGCAGC
GTGGGCGTGGGCATCACCAACCCTTACGGTAACACGCCCCCCCTACGGGG
GGTTATGGGCCGTTTCTTTCGGGGGACCTCACAGATGGCGCCCTTCCTCC
TTCCTTCCCACCTGCATACCTCTGCCTCCAGAAACAACATCGAGGGCACG
CTGAACCTGGTGGAGTGTATGCAGGCGCAGGAGGGTTGCCGCAAGCTAGT
CTTCTCTTCCTCCGCCACGGTCTACGGAGAACCGGACAAGCTGCCCTTGG
ACGAGCACAGCAGCGTGGGCGTGGGCATCACCAACCCTTACGGTAAGACG
AAATACATGATCGAGGAGATTCTGAAGGACTTGGCCAAGGCGGACCCCTC
TTGGGACATCCTCCTGCTCAGATATTTTAACCCCATCGGGGCTCACGAGA
GCGGACGGATGGGGGAAGACCCCGGGGGGATCCCGAACAACCTCATGCCT
TTCGTTGCTCAGGACGAAATACATGATCGAGGAGATTCTGAAGGACTTGG
CCAAGGCGGACCCCTCTTGGGACATCCTCCTGCTCAGATATTTTAACCCC
ATCGGGGCTCACGAGAGCGGACGGATGGGGGAAGACCCCGGGGGGATCCC
GAACAACCTCATGCCTTTCGTTGCTCAGGTGTGCGTGGGCCGGAGAGAGT
TTTTAAGCGTGTTCGGGAATGATTACAACACTCCTGATGGCACTGGGGTG
AGGGATTACATCCACGTCATGGACCTTGCAGAGGGGCACGTGGCTGCTGT
AAAAAAGGTGTGCGTGGGCCGGAGAGAGTTTTTAAGCGTGTTCGGGAATG
ATTACAACACTCCTGATGGCACTGGGGTGAGGGATTACATCCACGTCATG
GACCTTGCAGAGGGGCACGTGGCTGCTGTAAAAAAGTTGAGGGATTCGTG
CACTGGGTGCGTTCCGATTAACCTGGGCACCGGAGTGGGGTACTCCGTCA
TGGAGGTCGTGAAGGGAATGGAAGACGCTAGCGGCAAGCCGGTCCCGTAC
AAGTTGAGGGATTCGTGCACTGGGTGCGTTCCGATTAACCTGGGCACCGG
AGTGGGGTACTCCGTCATGGAGGTCGTGAAGGGAATGGAAGACGCTAGCG
GCAAGCCGGTCCCGTACAAGATGATGCCACGCCGAGCGGGGGACGTGGAA
TCGATGTACGCGGATCCTTCGTTAGCACAGAAGATGCTCGGCTGGTCTGC
CAAACGGAATCTCAAAGACATGTGCGATGACACGTGGAAGTGGCAGAGCG
CCCACCCCAACGGTTATCTGGAGGCGTGAATGATGCCACGCCGAGCGGGG
GACGTGGAATCGATGTACGCGGATCCTTCGTTAGCACAGAAGATGCTCGG
CTGGTCTGCCAAACGGAATCTCAAAGACATGTGCGATGACACGTGGAAGT
GGCAGAGCGCCCACCCCAACGGTTATCTGGAGGCGTGA