prot_P-littoralis_Contig166.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.11.1
Unique Nameprot_P-littoralis_Contig166.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length456
Homology
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BLAST of mRNA_P-littoralis_Contig166.11.1 vs. uniprot
Match: A0A6H5K3K1_9PHAE (AF0941-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3K1_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 3.300e-104
Identity = 232/443 (52.37%), Postives = 261/443 (58.92%), Query Frame = 0 
Query:   27 MSSANAFVKNEWEIRELEQMPARNFFDVVDPCESCRRSFRFRAGGSKPWEVCMRFPRQCFRKGEKHPLPTIRRVCIDELNEDRDFACVFETDGSDTVAWRKETTRCRVACDKCWNLAQCTRMKHTLDPHSIAFLDIDDAPGVTPAKRSCKNSSPSGSAKSNQHQTPTPDGRATKQARMSPCPSRLATGSRAATXXXXXXXXXXXXXXXXIADSSPPATARTPTPRP--------PTPSAASATTRVGGARRLSLSRSXXXXXXXXXXXXXXXXXXXXXPLEADKGKRPARXXXXXXXXXXXXXXXXXXXXXXXXGESRSQSPDVAAGTGAAV-----KFQAVSRGSDIYIERLREKVQSAAGGVKDASKHLEDLTKVKQHARAQIRDAERLLKMSEQKEQQVKAQLVIFKTEEAASKNELKDALKGSAEKLKEEAARLIREVR 456
            MS  NAFVK EWEI E E MPAR + DVVDPC  CR S   ++  SKPWE CMR  RQC R+ E HPLP IRRV IDEL+EDRDFACVF+ DGSDT+ W KET RCRV CDKCWNLAQC RMKHTLDPH IAFLDIDDAPGVTPAKRSCKNSSPSGSA     +TP    RA K+AR SP    L    RAA                    S PPA    PTP P           S    T  +     +S +RS                     P +  KGK PAR    XXXXXXXXXXXXX          R  SPD              +  A ++ +DIY+++LRE VQ AA  VK+ S HL DL  VK++ARAQIRDAERLL  SE KEQQ +A+L  FK EEA +K  LK AL GSA+KL+ EAARL +E R
Sbjct:    1 MSCPNAFVKKEWEINEFEPMPARPYLDVVDPCARCRGSVH-KSTSSKPWEQCMRQRRQCLRRNEDHPLPPIRRVPIDELDEDRDFACVFQADGSDTITWDKET-RCRVPCDKCWNLAQCLRMKHTLDPHDIAFLDIDDAPGVTPAKRSCKNSSPSGSAT----KTPGSGERAPKRARTSPSKG-LVVEPRAA------------------GGSCPPAPPVAPTPFPLLXXXXXXXXXSVTGPTVPL-----VSSTRSYYSAVGCFDRRGNPILRGNPVP-DVGKGKGPARKQSAXXXXXXXXXXXXXSDEAGGKCTPRMPSPDAGXXXXXXXXARRNQLYASNKRNDIYMDKLRELVQLAASKVKETSDHLVDLDNVKKYARAQIRDAERLLSSSEIKEQQAQAKLARFKVEEAEAKGLLKQALVGSAQKLQAEAARLEKEAR 412
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K3K1_9PHAE3.300e-10452.37AF0941-like domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 427..454
NoneNo IPR availableCOILSCoilCoilcoord: 377..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:102563..118616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.11.1mRNA_P-littoralis_Contig166.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 102563..118616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.11.1 ID=prot_P-littoralis_Contig166.11.1|Name=mRNA_P-littoralis_Contig166.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=456bp
FPTHVHRVRPRARARSTVIKHTLSLTMSSANAFVKNEWEIRELEQMPARN
FFDVVDPCESCRRSFRFRAGGSKPWEVCMRFPRQCFRKGEKHPLPTIRRV
CIDELNEDRDFACVFETDGSDTVAWRKETTRCRVACDKCWNLAQCTRMKH
TLDPHSIAFLDIDDAPGVTPAKRSCKNSSPSGSAKSNQHQTPTPDGRATK
QARMSPCPSRLATGSRAATRLSPKPSRLVTGPRAAIADSSPPATARTPTP
RPPTPSAASATTRVGGARRLSLSRSSSTRSNGGRGGGGGEGGGGSPPLEA
DKGKRPARRPQQQESTGAGGAASDGGGGGGAGGESRSQSPDVAAGTGAAV
KFQAVSRGSDIYIERLREKVQSAAGGVKDASKHLEDLTKVKQHARAQIRD
AERLLKMSEQKEQQVKAQLVIFKTEEAASKNELKDALKGSAEKLKEEAAR
LIREVR
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