prot_P-littoralis_Contig1635.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1635.1.1
Unique Nameprot_P-littoralis_Contig1635.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length215
Homology
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A7S3MCV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCV7_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.960e-36
Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 0
Query:    1 MRILNSQEKARTGVSPAEILFGNAVDLGRYLLYRP--KSDPNPDRDLSTYLEQMLDRQKTLIEVARDSQQEFDSHHMSEFDPEFTDYPLQSYVLWAHPGDKRSKLHARYLGPFQVVERSQDAYKIQDLVSGKLHET 134
            MRILNS+EK  TG+SPAEILFGN V+LGR++++ P   S  +P+  LS Y+E++L +Q TLIEVA+ +Q E DSHH+S FDP FT++P+ SYVL   P  KR KL  R  GP+QV+      Y +QDLVSGK  ET
Sbjct:  497 MRILNSEEKTNTGLSPAEILFGNTVNLGRHIMHTPITPSGDSPE-PLSAYMEKLLTQQATLIEVAQATQAEHDSHHLSTFDPAFTEFPINSYVLLDPPEGKRPKLQTRKKGPYQVINSIGPKYVLQDLVSGKNFET 631          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A7S3GQM7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQM7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.780e-33
Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 0
Query:  121 YKIQDLVSGKLHETHISNLKPFNFDPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTYLRAH 215
            Y +QDL++GK  ETHI+NLKPF +DPE   PQ++A  ++QEF+I  I+DHRG+R+ + +MEFKVRW GY+  +DSWEP+  LR+T QLH YLR H
Sbjct:    3 YTVQDLITGKNTETHITNLKPFLYDPEHVNPQDIAMQDNQEFLIDHIMDHRGNRHNKTSMEFKVRWAGYDESEDSWEPWKELRNTIQLHEYLRTH 97          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6ASE9_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6ASE9_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 1.290e-13
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 0
Query:   86 PLQSYVLWAHPGDKR-SKLHARYLGPFQVVERSQDAYKIQDLVSGKLHETHISNLKPFNFDPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTYLRAH 215
            P+ + VL  HP ++R  +L   YLGP++V E   D Y++++  +      H + + P+        P ++   +   +++  I+ HR  R + +  +FK+RW GY PEDDSW PY   +D   L  YL AH
Sbjct:    6 PIGTKVLITHPDNRRPDRLAPLYLGPYEVQEFIDDIYRVRNPETKTDLRYHATRVIPYTGTTI--DPLQLVSLDYDSYLVERIIAHRPGRTKTQ-WQFKIRWDGYGPEDDSWIPYKDAKDLAALDEYLEAH 133          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6E3G8_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E3G8_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 2.770e-13
Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 0
Query:    3 ILNSQEKARTGVSPAEILFGNAVDLGRYLLYRPK------SDPNPDRDLSTYLEQMLD-RQKTLIEVARDSQQEFDSHHMSEFDPEFTDYPLQSYVLWAHPGDKRSKLHARYLGPFQVV-----ERSQDAYKIQDLVSGKLHETHISNLKPFNFDPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTYLRA 214
            I+N+   A T +SPAEI+FG+   +   L           S P  + + +    Q+ + R KT+ + AR    E  +   SE            YVL  +P    SKL A + GP +++     +R   AY +QD+ +    +     ++ F  +  +   Q +A     E+V+  I+    D  +    ++ VRW GYEP +D+WEPY  +R  E L  YL+A
Sbjct:   49 IVNAAPHAPTRLSPAEIIFGSDFRVPGQLYVTDAISADEVSQPESNLEAARIARQLAEARIKTMTDDARARVGE-QTQITSE------------YVLVKYPSKAPSKLAAGWRGPMRLIRPVVRDRLTIAYVVQDVNTKHEFQVVSERVRAFEGELSQSMAQTLAATTESEYVVEAIIG-ASDERKVSDRQYLVRWAGYEPSEDTWEPYENVRQCEALDVYLKA 258          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6EAK5_9EUKA (Chromo domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6EAK5_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 5.930e-10
Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
Query:   90 YVLWAHPGDKRSKLHARYLGPFQ-----VVERSQDAYKIQDLVSGKLHETHISNLKPFNFDPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTE 206
            +VL  +P    SKL A + GP Q     +V+    AY ++D+ SGK        ++ F  D  R   Q +A     E+V+  I D   +++  K  +F V W GYEP +D+WEPY  ++D E
Sbjct:  235 WVLVKYPTKPPSKLAAGWRGPMQLVSPVIVDNLPVAYNVRDVNSGKEFRVASERVRSFEGDLSRDSAQALAATTDAEYVVECIYDSSNEKSI-KNRKFHVHWKGYEPCEDTWEPYENVKDCE 355          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A7S0URC9_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0URC9_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 1.060e-9
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 0
Query:  102 KLHARYLGPFQVVERSQD-AYKIQDLVSGKLHET-HISNLKPFNFDPERQQPQEVAQ------HNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQL 208
            K   R++GPF +++R  + +YK+    +  +H   HIS LK F+  P+  + Q + +         +E+++ +ILD R  R +R   EF +RW G+ PEDDSWEP+  ++D E L
Sbjct: 1207 KFRQRFVGPFTILQRIGNVSYKLDLPATWTIHPVFHISLLKAFHESPQFPEQQALLRPPPLLIDGHKEWLVDQILDERTTRGKR---EFFIRWTGFGPEDDSWEPWEFVKDAEAL 1318          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A163J7E1_ABSGL (Chromo domain-containing protein n=2 Tax=Absidia glauca TaxID=4829 RepID=A0A163J7E1_ABSGL)

HSP 1 Score: 65.9 bits (159), Expect = 1.790e-9
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   62 VARDSQQEFDSHHMSEFDPEFTDYPLQSYVLWAHPGDKRSKLHARYLGPFQVVERSQD-AYKIQDLVSGKLHETHI-SNLKPFNFDPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTY 211
            V   SQ++FD+ H      +  D+P+ + V    P  +   + A+Y GPF VV+R++  AY +Q      L + +  S LKP +         EV +     + +  I+ HRG   +    E+KVRW G+ P+DD+WEP     D + + TY
Sbjct:   85 VREASQKKFDATH------KIIDFPVGTLVGLLKPM-RTDSMEAKYNGPFTVVKRNKGGAYTLQQRNGELLPKAYPPSALKPLS--------DEVIKEKEDRWEVQAIVSHRGTPGK---YEYKVRWKGFTPDDDTWEPAEMFDDVDTIKTY 218          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A4S3J472_9EURO (RNA-directed DNA polymerase n=1 Tax=Aspergillus tanneri TaxID=1220188 RepID=A0A4S3J472_9EURO)

HSP 1 Score: 67.0 bits (162), Expect = 2.600e-9
Identity = 62/220 (28.18%), Postives = 107/220 (48.64%), Query Frame = 0
Query:    5 NSQEKARTGVSPAEILFGNAVDLGRYLLYRPKSDPNPDRDLSTYLEQ--MLDRQKTLIEVARDSQQEFDSHHMSE--FDPEFT--DYPL--QSYVLWAHPGDKRSKLHARYLGPFQVVER-SQDAYKIQ-DLVSGKLHET-HISNLKPFNFDPER-QQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTYL 212
            N+   + T  SP E L G    L      R   DP+P       LE+   L  +++L++ A +  Q+  +   ++   D +F   D  +     V    P    +KL  R LGPF +++     +YK+Q      +LH   H+S L+P++  P +  +P  +  +  +E+ + +IL+ + D++    + + VRW GY P+DD+WEP S + DTE L  +L
Sbjct:  998 NAAIHSSTKTSPHEALMGFVPSL------RINVDPDPTGHAPAALERATQLKEKRSLVKDALEKAQKAMARQYNKRRIDRQFKIGDQVMLRAKNVSTVRPN---AKLDHRQLGPFSIIDAWGNQSYKLQLPPKYRRLHPVFHVSLLEPYHERPGQWSRPPPIPINGEEEWEVDQILEEKRDKS--GNISYLVRWKGYPPDDDTWEPRSHVEDTEALDIWL 1206          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A6RF63_AJECN (RNA-directed DNA polymerase n=6 Tax=Ajellomyces capsulatus (strain NAm1 / WU24) TaxID=2059318 RepID=A6RF63_AJECN)

HSP 1 Score: 66.6 bits (161), Expect = 3.600e-9
Identity = 56/219 (25.57%), Postives = 106/219 (48.40%), Query Frame = 0
Query:    3 ILNSQEKARTGVSPAEILFGNAVDLGRYLLYRPKSDPNPDRDLSTYLEQMLDRQKTLIEVARDSQQEF-DSHHMSEFDPEFTDYPLQSYVLWAHPGDKR----SKLHARYLGPFQVVER-SQDAYKIQDLVSGK-LHET-HISNLKPFNF-DPERQQPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLRDTEQLHTYL 212
            + N+ + A TG++PAE L G   DL   +   P+         + ++E+   +    ++ AR +Q+ + D+ H  +       + +  YV+      +      KL  +Y+GPF+++    + AYK++   S + +H   H+S L+P+N  +    +P        +E+ + EIL+ R  +N  K  E+ VRW G+ P  D+WEP   + +T+    +L
Sbjct: 1351 VYNTSQHASTGIAPAEALMGYRPDLKINVSKPPQPVAIHAASRAKHIEETRHKLIENLQKARQAQKTYYDAKHKPQ------QFKIGDYVMLNAKNLRLLRPVRKLDHKYVGPFKILNTIGKQAYKLELPPSYRNIHPVFHVSLLEPYNRRNGALPEPGPELVDGEEEYQVEEILEKRQRKN--KPPEYLVRWTGWGPSGDTWEPEENILNTQAFEIFL 1561          
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8H8T094_9AGAM (Retrotransposable element Tf2 protein n=2 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8T094_9AGAM)

HSP 1 Score: 65.9 bits (159), Expect = 5.730e-9
Identity = 57/207 (27.54%), Postives = 99/207 (47.83%), Query Frame = 0
Query:    5 NSQEKARTGVSPAEILFGNAVDLGRYLLYRPKSDPNPDRDLSTYLEQMLDRQKTLIEVARDSQQEFDSHHMS-EFDPEFTDYPLQSYVLWAHPGDKRSKLHARYLGPFQVVER-SQDAYKIQDLVSGKLHET-HISNLKPFNFDPERQ-----QPQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYSCLR 203
            N++ KA TG SP EI++G +  +   L   P   P  D D +  L + +   +  I+ A++  ++ D+  +  EF P    + L S +    P +K    H +Y GPF V+ER    AY++    + ++H+  H+S L  F  D E        P  +     +E+ + + +D   +       +++VRW GY P +D+WEP   L+
Sbjct:  439 NARSKA-TGKSPFEIVYGRSPVISPLL--EPTGSPIAD-DRAKQLAETIQEVQASIKWAQERYKQTDTGKLPPEFQPGDKVWLLASNITLQRPNEKLD--HKQY-GPFPVIERVGSHAYRLALPETMRIHDAFHVSLLSAFKQDTEFDCTFTLPPPVITAEGEEEYEVDKFVDWAAEDG---IWKYRVRWKGYAPHEDTWEPAKDLQ 635          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3MCV7_9STRA4.960e-3655.15Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3GQM7_9STRA1.780e-3357.89Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J6ASE9_9EUKA1.290e-1332.06Chromo (CHRromatin Organization MOdifier) domain n... [more]
A0A8J6E3G8_9EUKA2.770e-1328.13Chromo (CHRromatin Organization MOdifier) domain n... [more]
A0A8J6EAK5_9EUKA5.930e-1033.61Chromo domain n=1 Tax=Carpediemonas membranifera T... [more]
A0A7S0URC9_9CHLO1.060e-934.78Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A163J7E1_ABSGL1.790e-930.92Chromo domain-containing protein n=2 Tax=Absidia g... [more]
A0A4S3J472_9EURO2.600e-928.18RNA-directed DNA polymerase n=1 Tax=Aspergillus ta... [more]
A6RF63_AJECN3.600e-925.57RNA-directed DNA polymerase n=6 Tax=Ajellomyces ca... [more]
A0A8H8T094_9AGAM5.730e-927.54Retrotransposable element Tf2 protein n=2 Tax=Rhiz... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 161..215
e-value: 0.0016
score: 27.7
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 162..215
score: 13.263401
IPR023780Chromo domainPFAMPF00385Chromocoord: 163..211
e-value: 2.2E-8
score: 33.9
NoneNo IPR availableGENE3D2.40.50.40coord: 143..215
e-value: 4.0E-14
score: 54.1
NoneNo IPR availableCDDcd00024CD_CSDcoord: 162..208
e-value: 1.31789E-11
score: 55.5609
IPR023779Chromo domain, conserved sitePROSITEPS00598CHROMO_1coord: 182..202
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 135..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1635contigP-littoralis_Contig1635:5114..5758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1635.1.1mRNA_P-littoralis_Contig1635.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1635 3217..5758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1635.1.1 ID=prot_P-littoralis_Contig1635.1.1|Name=mRNA_P-littoralis_Contig1635.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp
MRILNSQEKARTGVSPAEILFGNAVDLGRYLLYRPKSDPNPDRDLSTYLE
QMLDRQKTLIEVARDSQQEFDSHHMSEFDPEFTDYPLQSYVLWAHPGDKR
SKLHARYLGPFQVVERSQDAYKIQDLVSGKLHETHISNLKPFNFDPERQQ
PQEVAQHNSQEFVISEILDHRGDRNRRKTMEFKVRWHGYEPEDDSWEPYS
CLRDTEQLHTYLRAH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR023779Chromodomain_CS
IPR016197Chromo-like_dom_sf