mRNA_P-littoralis_Contig163.32.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: D7FNA8_ECTSI (Tryptophan-rich sensory-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNA8_ECTSI) HSP 1 Score: 343 bits (881), Expect = 6.280e-111 Identity = 189/306 (61.76%), Postives = 229/306 (74.84%), Query Frame = 1
Query: 115 MRTSSVAVVLALLGNATAFSFTPVASRLR---NPAAGRKHVFKNALPSSTNALPASPAGTWPQTAVVR-GGSLQLSASEEPAAAAAAADGDASTRPPLDRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRVAAKWAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKEAS 1020
M TS +LALLGN++AFSF+P A+ LR +P A R+ ++A ++ ALP +P AV R GG++ L AS+ PAA +RPPLD A+ KYI+ TA EF IIMGLL L Q +L R+ AKWA+ VF FGFLAMKSRTF++LNARRP++ +E + K E+R P WMPP K FP+IWI+IG LRA+ST +VWEALG NLV PIAAMV HLS+GDTWNHINNVE+KLGVAV VF+VWLSVANAVYRYYQVLPKAGLVLLPSL+WI VANLL+Q+ WRLNGK+PLYPPK+ S
Sbjct: 1 MITSICVTLLALLGNSSAFSFSPSATALRRDRSPTAARQ---QHARFANAQALPWTPRSN----AVSREGGTVVLKASDLPAAGX---XXXXXSRPPLDVAAVAKYIAGTAGEFTIIMGLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 296
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A7S2Y3H3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H3_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.260e-55 Identity = 100/210 (47.62%), Postives = 141/210 (67.14%), Query Frame = 1
Query: 394 LDRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRVAAKWAK-AMVFGVFGFLAMKSRTFA-VLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKEA 1017
+D AI YI AT+ + G+I L + + + Q ++ K AK +V F F+++KSR F+ L+ RP++K E + +++ P W PPP FP IW++I LRA S+T+VWEA C L+ AP+ + + HLSIGDTWN INNVER++G +V V +VWLSV NAV Y+ V AGLVLLPS IWI +A +LI + W LNGK+PL+P K++
Sbjct: 106 VDWSAIGLYIGATSVQIGLISLFLKVADFVMEQYISNKLAKKGIVIAFFAFMSLKSRVFSPFLDNSRPSLKSEKSNRQKRKTPSWTPPPIAFPFIWLTIACLRATSSTMVWEAKNCTLLNAPVLSFMLHLSIGDTWNCINNVERRMGASVSAVILVWLSVINAVRMYWGVSKTAGLVLLPSAIWISIATVLITSIWNLNGKEPLFPVKKS 315
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A4D9CZE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZE4_9STRA) HSP 1 Score: 185 bits (469), Expect = 7.510e-51 Identity = 96/210 (45.71%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 388 PPLDRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRVAAKWAKA-MVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKE 1014
PP+ A+ +I ATA +F I+ + + L+ +K A +V F F++++SR F++L+ RP V E + + ++ P WMPP K FP+IWISIG LR I+++LV+E L+ + A V HLS+GDTWN I NVE + G +VP VF+VWLSV NAV Y Q LP AG VL PS +WI +AN+L+ + WRLNG +PLYP K+
Sbjct: 23 PPMQWGALGTWILATALQFATIVAFMYGMEKAFLRFNLSKQASIFLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAFPVIWISIGVLRTIASSLVYETTN-TLLSPALLAFVLHLSVGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVRMYAQTLPLAGKVLAPSAVWITIANVLVISIWRLNGAEPLYPFKK 231
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A7S0WK81_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WK81_9CHLO) HSP 1 Score: 186 bits (471), Expect = 2.520e-50 Identity = 100/205 (48.78%), Postives = 130/205 (63.41%), Query Frame = 1
Query: 406 AIVKYISATAAEFGIIMGLLTLFQ---WGVLQRVAAKWAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPK 1011
A+VKYI+ATA E G I L Q G L + AKA+V +F LA +SR F+ LNA RP + E KAK E++ P W PP +FP++WIS+GFLR++ST +V+ G +V I A+V HLSIGDTWN INNVE+KLG A V V S N V +YY V+P AG V+ P +W+ +A+ L+ W +NGKQPLYP K
Sbjct: 90 AVVKYIAATAFEVGAITTALFAAQKFCLGNLHATSLGAAKAIVAVMFFMLAFRSRVFSPLNASRPKIANERKAKQERKRPSWTPPAVVFPLVWISMGFLRSLSTMMVFATTG-TVVHPAIIALVAHLSIGDTWNSINNVEKKLGAAAVGVLFVVSSAYNVVAQYYNVIPTAGYVIAPLAVWLTIASALVWNIWAINGKQPLYPTK 293
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A7S0S4Y6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4Y6_9CHLO) HSP 1 Score: 181 bits (460), Expect = 6.990e-49 Identity = 100/226 (44.25%), Postives = 128/226 (56.64%), Query Frame = 1
Query: 394 LDRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRV-----------------AAKWAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKEAS 1020
LD A+ KY A + GI+ G L WG+ Q AAKW +V F ++KSR F+ L+A RP +K E KA ++++ P WMPPP FPI+W +IG LR IS+ +VWEA G + P+ HL++GD WNHINNVER+ GVAVP V S AV YY AGLVL PS +WI +A+LLI + W LNG+ PLYP K S
Sbjct: 60 LDVAALGKYAGAITLQTGIMSGAL----WGLQQASSALAASESLPGGVEGADAAKW---LVTAFFLVTSIKSRIFSPLDASRPTLKGEKKAMSDRKRPSWMPPPVTFPIVWSTIGLLRGISSVMVWEACGRDATALPLVVFCLHLAVGDCWNHINNVERRAGVAVPGVLCCLASCVAAVAAYYNTDTTAGLVLAPSAVWISIASLLIYSIWDLNGRDPLYPTKGES 278
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A061RD28_9CHLO (Tryptophan-rich sensory protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD28_9CHLO) HSP 1 Score: 181 bits (458), Expect = 2.630e-48 Identity = 93/209 (44.50%), Postives = 134/209 (64.11%), Query Frame = 1
Query: 406 AIVKYISATAAEFGI----IMGLLTLFQWGVLQRVAAKWAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKEAS 1020
A++ YI TA +F I + GL G L + A A +F F +A++SR + L+ RP+ E+K + + P WMPPP +FPI+W +I LR++STT+VWEA G +L+ API+ V HL +GDTWN INNVE++ G A VV +VW + NA+++YYQV P AG VL P +W+ VA++L+ + W +NGK+ L+P KEAS
Sbjct: 102 AVLTYIGGTATQFLIFSIVLRGLQFATSTGPLSQGIAPTATIAIF--FLAMAVRSRILSPLDNSRPSRSSESKEISAGKRPSWMPPPVVFPIVWSTIAVLRSVSTTMVWEASGRDLLIAPISWFVLHLCVGDTWNTINNVEQRKGTAAVVVLLVWATAXNAIFQYYQVSPTAGYVLAPLAVWLSVASVLVWSIWAINGKENLFPMKEAS 308
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A7S3CF46_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CF46_9CHLO) HSP 1 Score: 178 bits (452), Expect = 2.050e-47 Identity = 95/209 (45.45%), Postives = 131/209 (62.68%), Query Frame = 1
Query: 418 YISATAAEFGIIMGLLTLFQW------GVLQRV----AAKWAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPKE 1014
Y+ AT +FG+I L + GVL V AK VF F F+A +SR F+ L+ RRP +K E+K AE++ P WMPPP FPIIW +IG LRA S+ LVW+ALG + P+ +FHL IGDTWN INNV+++ GVA + V SV +A + Y+QV +AG++L PS +WI +A+ L+ + W+LN +QPLYP K+
Sbjct: 106 YVYATVVQFGLIACTLRALDFAFPKLLGVLGNVNSALPAKAEGVAVFLFFLFMAFRSRIFSPLDNRRPTLKGESKEIAERKRPAWMPPPLAFPIIWSTIGILRATSSLLVWKALGGKFLVWPLMVFLFHLCIGDTWNSINNVDKEYGVATLSMVFVVGSVYSACFSYWQVSQRAGMILAPSCVWISIASFLVFSIWKLNDRQPLYPVKK 314
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A6V2QN12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QN12_HETAK) HSP 1 Score: 176 bits (447), Expect = 7.450e-47 Identity = 94/212 (44.34%), Postives = 134/212 (63.21%), Query Frame = 1
Query: 397 DRVAIVKYISATAAEFGIIMGLLTLFQWGV---LQRVAA-KWAKAMVFGVF-GFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLN--GKQPLYPPK 1011
D A YI AT A+ MG ++ F +G+ L +V+ + +V VF +++KSR F+ L+ RP+ + +T+ E + P WMPPP FPIIW +IG LR +S+ LVW+A+G +L+ A++ HLSIGDTWN INNV+R+LG AVP V VWLSV N V Y+ P AG V+ PS +W+ VA +L+ WR+N G++PL+P K
Sbjct: 79 DAKAFATYIGATGAQ----MGFISAFMYGLNFLLSKVSGYPLLQTVVISVFFAIMSLKSRIFSPLDNSRPSPESQTQRNKEMKRPSWMPPPLAFPIIWSTIGILRTVSSVLVWKAMGRDLLNPATLALMLHLSIGDTWNTINNVDRRLGFAVPGVVCVWLSVLNLVRAYFAASPLAGYVIAPSALWLSVAMVLVTTLWRMNSNGQEPLWPYK 286
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A1Y5IEM7_OSTTA (Tryptophan-rich sensory protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IEM7_OSTTA) HSP 1 Score: 174 bits (441), Expect = 6.270e-46 Identity = 94/209 (44.98%), Postives = 130/209 (62.20%), Query Frame = 1
Query: 394 LDRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRVAAK---WAKAMVFGVFGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPK 1011
LD A+ +Y++ATA E I L Q L ++ A AKA+ +F LA++SR F+ LNA RP + E +K +++ P W PP +FP++WIS+ FLR++ST LV+ G NL+ + ++V HLSIGDTWN INNVE+KLGVA V V S N V +YY+VLP AG ++ P IW+ VA L+ W +NG+Q LYP K
Sbjct: 95 LDFGAVARYVAATAFEVSAIGAFLYFVQMAGLAKLHASNLGAAKAITAVIFFGLALRSRVFSPLNASRPKIANERLSKKQRKRPSWTPPAVVFPLVWISMAFLRSLSTMLVFTTTG-NLLHPAVMSLVAHLSIGDTWNSINNVEKKLGVAAIGVLFVVGSAYNVVAQYYKVLPTAGYMIAPLAIWLTVATALVWGIWNINGRQVLYPTK 302
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Match: A0A7S4LLX5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLX5_9EUGL) HSP 1 Score: 174 bits (440), Expect = 5.760e-45 Identity = 92/210 (43.81%), Postives = 122/210 (58.10%), Query Frame = 1
Query: 397 DRVAIVKYISATAAEFGIIMGLLTLFQWGVLQRVAAKWAKAMVFGV-----FGFLAMKSRTFAVLNARRPNVKRETKAKAEKRLPQWMPPPKLFPIIWISIGFLRAISTTLVWEALGCNLVKAPIAAMVFHLSIGDTWNHINNVERKLGVAVPVVFMVWLSVANAVYRYYQVLPKAGLVLLPSLIWIGVANLLIQATWRLNGKQPLYPPK 1011
D A+++Y+ AT ++ ++M L + VA +V V F F ++KSR F+ L+ RP V +E K EK+ P WMPPP +FPI+W SI LR IS ++W LG L+ PI LSIGDT+N INNVE+++G A V VW + Y YYQ LP AGLVLLP IW+ +A LI + WRLNG +PLYP K
Sbjct: 170 DGEAVLRYLGATGLQWTLLMATLWVLDQTNAYLVAGLGLPVLVPQVLVVLFFAFTSLKSRVFSPLDNSRPTVNKEQKEIDEKKRPSWMPPPLVFPIVWTSIAVLRTISGYMIWNGLGQTLLVTPIMVYFLGLSIGDTFNTINNVEKRMGTAFIAVLFVWSTFLAVNYIYYQALPTAGLVLLPQSIWLSIATCLIYSIWRLNGAEPLYPYK 379 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig163.32.1 >prot_P-littoralis_Contig163.32.1 ID=prot_P-littoralis_Contig163.32.1|Name=mRNA_P-littoralis_Contig163.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=304bp MRTSSVAVVLALLGNATAFSFTPVASRLRNPAAGRKHVFKNALPSSTNALback to top mRNA from alignment at P-littoralis_Contig163:280154..290381- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig163.32.1 ID=mRNA_P-littoralis_Contig163.32.1|Name=mRNA_P-littoralis_Contig163.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10228bp|location=Sequence derived from alignment at P-littoralis_Contig163:280154..290381- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig163:280154..290381- >mRNA_P-littoralis_Contig163.32.1 ID=mRNA_P-littoralis_Contig163.32.1|Name=mRNA_P-littoralis_Contig163.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=912bp|location=Sequence derived from alignment at P-littoralis_Contig163:280154..290381- (Pylaiella littoralis U1_48)back to top |