prot_P-littoralis_Contig162.13.14 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig162.13.14
Unique Nameprot_P-littoralis_Contig162.13.14
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length582
Homology
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BLAST of mRNA_P-littoralis_Contig162.13.14 vs. uniprot
Match: A0A6H5JI88_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI88_9PHAE)

HSP 1 Score: 647 bits (1668), Expect = 4.950e-220
Identity = 445/549 (81.06%), Postives = 470/549 (85.61%), Query Frame = 0 
Query:    3 CLRFPVGVEDILMEEMVQMDPMDFDTGQGGFDTDETRVFARLAQSGHPVPLPLLSYAVDASLAATPGRSFTERVRDLHLLGIAPDPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDRPPSNRIKKIKKASSPRESSRRDSERSGAGARTASSVEEWTKTEDRLLVAAVQHFGENWVLVAFSINKCPILRGRMRSGSQCKARHSNLVALGAT-QRFPRSAKPLSVRLRADYKGVAILSEQPAALTLAMRTRAPVVPVVTAAARQMFAARFAALVNAAQKKPIPPPIPGCDNPEAVIQPAHNSHAKAADDAGAAGALAPTQITDRQRAALLQXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGIQPQAPLAVSGGAQQLQGGVSXXXXXXXXXXXXXAPSXXXAPAGAVPAGVXXXXXXXXXXXXXSAAQTLAANLSSQVRELLSRAPKLAGAAGGSAGSTHQVLEALRLHPQLTAKIQATIHRTDTTDAQKVEALA 550
            C   PV VEDIL+EEMVQM+P DFDT +G FDTDETRVFARLA+ GHPVP PLLSYAVDA+LAATPGRSFTERVRDLHLLGI+P+PFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDR PSNR KK+KKA SPRESSRR+ E  GAG R  +SVEEWTK ED LLV+AVQ FGENWVLVAFSINKCPILRGRMRSGSQCKARH+NLVALGA  QR  R A+PLSVRL   Y+G AIL +QPAALT+AMR+R P+VPV  AAARQ FAARFAALV A +KKPIPPPIPGCDNPEA+IQPAHNSHAKAA++AGAAGALAPTQITDRQRAAL+QXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GHGIQPQAPL VS G Q LQ G S  XXXXXXXXXXX   X        PAGV             S AQ LAANLSSQVR LLSRAP + GAAGGS   T+QVLEALRLHPQLTAKIQATIHRTDTTDAQKVEALA
Sbjct:  439 CPWSPVRVEDILVEEMVQMNPDDFDTERGCFDTDETRVFARLAEGGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDRLPSNRSKKLKKALSPRESSRREGEHPGAGRRNKTSVEEWTKMEDSLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQRSQRGARPLSVRLPPTYRGTAILPDQPAALTMAMRSRVPLVPVAGAAARQAFAARFAALVKAVKKKPIPPPIPGCDNPEALIQPAHNSHAKAAEEAGAAGALAPTQITDRQRAALIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHGIQPQAPLPVSAGQQPLQQGGSVGXXXXXXXXXXXXXXX-------APAGVALAAGGVAGAAPTSPAQNLAANLSSQVRALLSRAPNMPGAAGGS---TNQVLEALRLHPQLTAKIQATIHRTDTTDAQKVEALA 977
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BLAST of mRNA_P-littoralis_Contig162.13.14 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 3.730e-135
Identity = 236/308 (76.62%), Postives = 252/308 (81.82%), Query Frame = 0 
Query:    3 CLRFPVGVEDILMEEMVQMDPMDFDTGQGGFDTDETRVFARLAQSGHPVPLPLLSYAVDASLAATPGRSFTERVRDLHLLGIAPDPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDRPPSNRIKKIKKASSPRESSRRDSERSGAGARTASSVEEWTKTEDRLLVAAVQHFGENWVLVAFSINKCPILRGRMRSGSQCKARHSNLVALGAT-QRFPRSAKPLSVRLRADYKGVAILSEQPAALTLAMRTRAPVVPVVTAAARQMFAARFAALVNAAQKKPIPPPIPGCDNPE 309
            C   PVGVEDIL+EEMVQM+P DFDTG+G FDTDETRVFARLA  GHPVP PLLSYAVDA+LA TPGRSFTERVRDLHLLGI+P+PFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDL CSLSYVDR PSNR KK+KKA SPRESSRR+ E+ GAG R  +SVEEWTK ED LLV+AVQ FGENWVLVAFSINKCPILRGRMRSGSQ KARH+NLVALGA  QR PR A+P SVRL   Y                     P+VPV  AAARQ F+ARFAALV A +KKPIPPPIPGCDNPE
Sbjct: 1762 CPWSPVGVEDILVEEMVQMNPDDFDTGRGCFDTDETRVFARLADGGHPVPPPLLSYAVDATLATTPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLSYVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTKMEDTLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQNKARHANLVALGAAGQRSPRGARPKSVRLPPTYL--------------------PLVPVAGAAARQAFSARFAALVKAVKKKPIPPPIPGCDNPE 2049
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.13.14 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI88_9PHAE4.950e-22081.06Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
D7FME7_ECTSI3.730e-13576.62Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 345..372
NoneNo IPR availableGENE3D1.10.10.60coord: 169..225
e-value: 3.8E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..162
IPR001005SANT/Myb domainSMARTSM00717santcoord: 170..226
e-value: 0.0042
score: 26.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 166..224
score: 7.584305
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 173..219
e-value: 3.03408E-5
score: 39.481
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 173..219
e-value: 5.5E-6
score: 26.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 174..228
score: 9.031912
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 173..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:120031..137739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.13.14mRNA_P-littoralis_Contig162.13.14Pylaiella littoralis U1_48mRNAP-littoralis_Contig162 103596..137963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig162.13.14 ID=prot_P-littoralis_Contig162.13.14|Name=mRNA_P-littoralis_Contig162.13.14|organism=Pylaiella littoralis U1_48|type=polypeptide|length=582bp
MACLRFPVGVEDILMEEMVQMDPMDFDTGQGGFDTDETRVFARLAQSGHP
VPLPLLSYAVDASLAATPGRSFTERVRDLHLLGIAPDPFLHCMPCIDLAM
PPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDRPPSNRIKKIKKASSP
RESSRRDSERSGAGARTASSVEEWTKTEDRLLVAAVQHFGENWVLVAFSI
NKCPILRGRMRSGSQCKARHSNLVALGATQRFPRSAKPLSVRLRADYKGV
AILSEQPAALTLAMRTRAPVVPVVTAAARQMFAARFAALVNAAQKKPIPP
PIPGCDNPEAVIQPAHNSHAKAADDAGAAGALAPTQITDRQRAALLQQQQ
QLLQAQQQAHLAQRQAHQQQQQQQHAAQQQALQQQAIAQQHAAALAAQQQ
QRQQQAAAQAAAAGHGIQPQAPLAVSGGAQQLQGGVSAAAAAAAAAAASS
APSAAAAPAGAVPAGVAIATGGAAGAVPTSAAQTLAANLSSQVRELLSRA
PKLAGAAGGSAGSTHQVLEALRLHPQLTAKIQATIHRTDTTDAQKVEALA
SMLSAVRSAAAAAAAAGAPTNPAAGASGAGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf