prot_P-littoralis_Contig1602.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1602.1.1
Unique Name	prot_P-littoralis_Contig1602.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	108

Homology

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5JUA6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.150e-29
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:   34 APSDVTVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 115

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.890e-27
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ +GVAERALGLI+DAA +  IQA  ++P APN+PSLWAEAI
Sbjct:   94 APSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYDGVAERALGLIEDAALAARIQAPTLYPGAPNYPSLWAEAI 175

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.320e-26
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:  793 APSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 874

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.320e-26
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:  628 APSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 709

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.330e-26
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:  641 APSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 722

[Close]

BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.330e-26
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:  784 APSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 865

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5JBD1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD1_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.420e-26
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP  V +V +DNGGEF +GEF  VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  ++P APN+PSLWAEAI
Sbjct:  691 APSDVIVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAI 772

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5K2Y3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y3_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.390e-26
Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 0

Query:    2 PLAVKIVHTDNGGEFDGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAILAELEEKTNTHIRS 95
            P  V I  TD GGEF G+F EVCR   IKQE +PPH+P++NG AER LGLI DAA +  IQA  +FPDAPN P LW EAI     +   T  +S
Sbjct:  104 PCEVHIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKNNGTAERTLGLITDAALASRIQATQLFPDAPNHPGLWTEAISCACHQLNCTATKS 197

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BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5KX24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX24_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.530e-26
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0

Query:    1 APLAVKIVHTDNGGEF-DGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            AP AV +V +DNGGEF +GEF +VCR+ CIKQE +P HSP+ NGVAERALGLIKDAA +  IQA  +FP APN+PSLWA  +
Sbjct:  567 APSAVMVVRSDNGGEFFEGEFGKVCRKYCIKQELTPAHSPEYNGVAERALGLIKDAALATRIQAPTLFPGAPNYPSLWATQV 648

[Close]

BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Match: A0A6H5K2T3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T3_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 7.330e-26
Identity = 54/80 (67.50%), Postives = 60/80 (75.00%), Query Frame = 0

Query:    2 PLAVKIVHTDNGGEFDGEFEEVCRELCIKQEESPPHSPQSNGVAERALGLIKDAARSGLIQAMVIFPDAPNFPSLWAEAI 81
            P  V IV TD GGEF G+F EVCR   IKQE +PPH+P+ NGVAERALGLI DAA +  IQA  +FPDAPN P LWAEAI
Sbjct:   82 PCKVYIVRTDGGGEFQGQFAEVCRTHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAI 161

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1602.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUA6_9PHAE	1.150e-29	67.07	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J7U9_9PHAE	2.890e-27	64.63	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JTI6_9PHAE	1.320e-26	67.07	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JZQ8_9PHAE	1.320e-26	67.07	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN00_9PHAE	1.330e-26	67.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KF60_9PHAE	1.330e-26	67.07	Uncharacterized protein n=12 Tax=Ectocarpus sp. CC...	[more]
A0A6H5JBD1_9PHAE	2.420e-26	67.07	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K2Y3_9PHAE	3.390e-26	55.32	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KX24_9PHAE	4.530e-26	65.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2T3_9PHAE	7.330e-26	67.50	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 3..104 e-value: 8.9E-16 score: 59.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..108 score: 12.275607
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1602	contig	P-littoralis_Contig1602:3286..3609 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1602.1.1	mRNA_P-littoralis_Contig1602.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1602 3286..3610 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1602.1.1 ID=prot_P-littoralis_Contig1602.1.1|Name=mRNA_P-littoralis_Contig1602.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp
APLAVKIVHTDNGGEFDGEFEEVCRELCIKQEESPPHSPQSNGVAERALG
LIKDAARSGLIQAMVIFPDAPNFPSLWAEAILAELEEKTNTHIRSFLEER
AAIRSLME

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf