prot_P-littoralis_Contig16.189.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig16.189.2
Unique Nameprot_P-littoralis_Contig16.189.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length541
Homology
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BLAST of mRNA_P-littoralis_Contig16.189.2 vs. uniprot
Match: A0A6H5JL40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL40_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.600e-9
Identity = 38/77 (49.35%), Postives = 43/77 (55.84%), Query Frame = 0 
Query:  283 LCGRGRRATLPPPTRVQTVTWDR-----------------------PVGELVKGVAFPVGLQHLAFGWGFNQPVDRV 336
            +CGR RR  LPPPTRV+TVTWDR                       PVGELVKGVA+P GL  + FG GFNQ +  V
Sbjct:   32 VCGRSRRVVLPPPTRVRTVTWDRCLPRFLVLLESAVVMGWRRWCPRPVGELVKGVAWPPGLTRITFGDGFNQSLSLV 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.189.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JL40_9PHAE1.600e-949.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..53
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 417..535
coord: 316..421
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 316..421
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 417..535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:727560..738000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.189.2mRNA_P-littoralis_Contig16.189.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig16 717178..738057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig16.189.2 ID=prot_P-littoralis_Contig16.189.2|Name=mRNA_P-littoralis_Contig16.189.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=541bp
MKQLQLASVAICRDCRDGDPWHVRVSEKTPRRLWCRLAREQDQSPDRSPD
QSPDRAPDQLPSNDNQSSPSPLQDGHQQSPMLSSMPLLLPPTAGEGADTR
LKGDDDGEGLHRYRPCHGRGGDGGDEGGGGGGGGGGGVGDGAGRKETWRS
AILGAIRRGWGSPSDPAVQEECTGSGSGSGSGGGSGSSRNSRNKSSSRNS
SSSSSVATSPVSSVVVAGCANAAAAATNNSPTTMGGVMPSTPSIPAPSSP
SSAATAVAAKGWGAQRTAAAAACRGHSSTTVGLCGRGRRATLPPPTRVQT
VTWDRPVGELVKGVAFPVGLQHLAFGWGFNQPVDRVDWPRGLTRITFGDG
FSQSLEFVRWPHGLEEINLGRDFNEVVDVTKWPRSLKRMTFGMKFNQPLD
FVDWPDSLEEVVLGSSFDQPVSGVVWPKGLRLLAFGWHFNQTVKGTGWPD
GLREVSFGCAFNSPIDEVVWPAGLRRLTFGHNFNRPLGGVAWPPRLQRLA
LGTKFDQAIADVVWPKGLEELVFGEMFDQARKIPGTGPPG*
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