mRNA_P-littoralis_Contig16.96.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: D7FSR1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR1_ECTSI) HSP 1 Score: 210 bits (534), Expect = 3.560e-58 Identity = 107/111 (96.40%), Postives = 111/111 (100.00%), Query Frame = 2
Query: 800 QRHMDDKRFERELKHKEVLQKQADEGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRNRPKR 1132
+RHMDDKRFERELKHKEVLQKQAD+GASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADR+KMVEYRAQLDKER+SALAKGRNRPKR
Sbjct: 37 ERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALAKGRNRPKR 147
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A812SC88_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SC88_SYMMI) HSP 1 Score: 118 bits (295), Expect = 2.580e-26 Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 2
Query: 797 LQRHMDDKRFERELKHKEVLQKQADEGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRN 1120
L+ +DDKR ERE KE +KQ D A + S QA S+T+DAF RM G E RT+A+KI DPNR SWEQ++KDN DKLD+ GA+ RKM EYRAQLD+ER+ LAKGR+
Sbjct: 26 LEHRIDDKRHERE---KEYKRKQMDGTAVQPSRQAASSTFDAFQRMAAGLEGRTLAEKIADPNRPSWEQYKKDNEDKLDMMGAEMRKMTEYRAQLDREREEKLAKGRS 130
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A836CAI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI5_9STRA) HSP 1 Score: 116 bits (291), Expect = 5.630e-25 Identity = 67/125 (53.60%), Postives = 84/125 (67.20%), Query Frame = 2
Query: 803 RHMDDKRFERELKHKEVLQK--------QADEGASKESEQ-------APSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRNRPKR 1132
RH+DDKRFEREL+HK+ L+ +A G + S APSA YDAF+RMQ G RTIADKINDPNR++W+ F+K NADKLD+ G D +KMVEYR QLD+ER+ LA R+ K+
Sbjct: 37 RHVDDKRFERELEHKKNLEAAPYAIGKGEAGAGGDQASRTKTLLLHAAPSAAYDAFIRMQAGLGERTIADKINDPNRITWDHFKKVNADKLDLVGNDLKKMVEYRKQLDREREGRLAASRDGKKK 161
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A7S3Y9Y5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Y5_HETAK) HSP 1 Score: 112 bits (279), Expect = 9.290e-25 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 2
Query: 803 RHMDDKRFERELKHKEVLQKQA-----DEGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRNR 1123
RH DD RFEREL+ K+ LQ+++ +EG +K APSATYDAFMRM TGQ+ RTI +KI D NR +W+Q++KD+ DKL+I GA+ +KM+EYR QLD R+ AL ++R
Sbjct: 38 RHKDDVRFERELEFKQKLQEESGKMEDEEGGAK----APSATYDAFMRMATGQQERTIQEKIADSNRPTWDQYKKDHEDKLEIAGAELKKMIEYRKQLDANREKALNDAKSR 145
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A7S2SNX5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX5_9STRA) HSP 1 Score: 102 bits (255), Expect = 6.910e-21 Identity = 56/110 (50.91%), Postives = 74/110 (67.27%), Query Frame = 2
Query: 803 RHMDDKRFERELKHKEVLQKQADEGASKESEQAP----SATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRN 1120
RH+DD RFEREL K+ +Q +E + A SATYDAFMRM TG++ RTIADKIND NR +W++++K N + LD+ G RKM+EYR LD+ R+ LA+G N
Sbjct: 44 RHLDDVRFERELAFKKSMQPGGKAEVGEEMQAAAPAQSSATYDAFMRMATGRQERTIADKINDSNRPTWDEYKKKNEELLDMDGVQHRKMMEYRKTLDEARERELARGTN 153
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A482STU7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STU7_9ARCH) HSP 1 Score: 100 bits (248), Expect = 2.100e-20 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 2
Query: 797 LQRHMDDKRFERELKHKEVLQKQADEGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSAL 1105
L R + DKRFERE + +++ + A K S+T+DAF RM G E RTI+DKINDP R +WEQ++K+N DKLDI G++ RKMVEYRAQLDKERD L
Sbjct: 22 LDRQVGDKRFERE----KTVRESSGAAAVKP---VMSSTFDAFQRMAAGLEGRTISDKINDPTRPTWEQYKKENEDKLDIVGSEVRKMVEYRAQLDKERDDRL 117
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A7S4KBM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KBM4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.280e-19 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 2
Query: 902 PSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRNRP 1126
PSA+ +A MR+ G+E RTIA+K+ D NR +WEQ++KDN DKL+I G D++KM EYR +LD +RD L++GRNRP
Sbjct: 6 PSASMEAVMRLMAGKEERTIAEKLADSNRPTWEQYKKDNEDKLNISGLDQKKMEEYRKELDAQRDKMLSRGRNRP 80
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A3R7J1T7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J1T7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.630e-18 Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 2
Query: 797 LQRHMDDKRFERELKHKEVLQKQADEGASKESEQAP---SATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKG 1114
L R +DD RFER+ + E A S SAT DAFMRM TG+E RTIAD+I+DPNR +WEQ++K+NADKLD+ G ++M EYR +LD R+ ALA+G
Sbjct: 22 LDRQIDDDRFERQRAIRAAAAAPPVEKAKPSSSNVATPQSATMDAFMRMMTGKEERTIADRISDPNRPTWEQYKKENADKLDLSGNGEKEMKEYRKKLDAAREKALARG 130
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A7S2RE01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RE01_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.700e-17 Identity = 51/121 (42.15%), Postives = 69/121 (57.02%), Query Frame = 2
Query: 803 RHMDDKRFERELKHKEVLQK---------------QADEGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSALAKGRN 1120
RH+DD R+E+ KE + G+ + PSA +A MR+ G E RTIA K+ D NR +WEQ++KDN DKL+I G D++KM EYR QLD+ERD L++G N
Sbjct: 20 RHVDDARYEKHKAEKESTSSGXXXXXXSGNVRSSANNNAGSGGTTTSVPSAQMEAVMRLMAGMEERTIAQKLADSNRPTWEQYKKDNEDKLNISGVDQKKMEEYRKQLDEERDKILSRGTN 140
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Match: A0A7S0CH52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CH52_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.890e-17 Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 2
Query: 905 SATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRRKMVEYRAQLDKERDSAL 1105
S+ DA +R+ TGQE RTIA+K+ D NR +WEQ++KDNADKLDI G +++KM EYR +LDKERD L
Sbjct: 39 SSQMDAVIRLMTGQEERTIAEKLADSNRPTWEQYKKDNADKLDIAGEEKKKMAEYRRELDKERDERL 105 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.96.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.96.2 >prot_P-littoralis_Contig16.96.2 ID=prot_P-littoralis_Contig16.96.2|Name=mRNA_P-littoralis_Contig16.96.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=346bp MTSSTAVQHKHNAAKAVLLYPQHRERRVHRERQQRQAYTTRHRIIPDSSQback to top mRNA from alignment at P-littoralis_Contig16:375345..379969- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.96.2 ID=mRNA_P-littoralis_Contig16.96.2|Name=mRNA_P-littoralis_Contig16.96.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4625bp|location=Sequence derived from alignment at P-littoralis_Contig16:375345..379969- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:375345..379969- >mRNA_P-littoralis_Contig16.96.2 ID=mRNA_P-littoralis_Contig16.96.2|Name=mRNA_P-littoralis_Contig16.96.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1038bp|location=Sequence derived from alignment at P-littoralis_Contig16:375345..379969- (Pylaiella littoralis U1_48)back to top |