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Homology
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE) HSP 1 Score: 613 bits (1581), Expect = 3.000e-206 Identity = 341/494 (69.03%), Postives = 381/494 (77.13%), Query Frame = 3
Query: 618 NSPATGSPALSLELGKAEARQSSNLRVTTRAIDALHARIAAAKRELDQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSRTAKSSPSKGEGSASNSP------VEAGDDGGAV--KKTGLQAMDQEGGDAGGGXXXXXXXXXXXXXXXXXXAVAGILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENETMALTL 2075
N G+PAL EL KAEARQ+SNLRVTT+AIDALHAR+A AKRELD+ +++ SPSKG+G+A SP V A GG ++ G QAMD EG G G VAGIL++LASDVAGL TL+AVGSE+KNFHATISKLAKAAEK FGG+VESVRRTP L EKALHTAI THLYRRGAFR+AA+FSEDS+AS+P +T+S LVE+H VLDAL+K NLAPAERWFEKRR+ALE VGSSLEFQLARLRFLRFL+SADP QRREAM+YARER+ PV+GGHMREL+ELMGSLLW GNLEASPYSHLLS ELW RVKESVA+D SR+SGLSRESILSVAFRAG+LALPTL+KMA VVRGSN EW+GM+ELPLEVPLPPGLRYHSMFSCPVSREPS+LDNPPVLLKCGHAVLRSSV RL R+GSRFKCPTCP+EQ ENETM LTL
Sbjct: 3 NQGGGGAPALGPELNKAEARQASNLRVTTKAIDALHARVARAKRELDKHNQKQLEAAGGGAGAASSEGLRAGANESPTRSASKPATAKSPTRSPSKGKGAACKSPPRSTKAVAAATRGGGTGGQQGGAQAMDLEGEGGGSGVR-----------------VAGILSELASDVAGLKTLDAVGSEHKNFHATISKLAKAAEKQFGGNVESVRRTPALNEKALHTAIITHLYRRGAFRAAAKFSEDSTASIPAETTSHLVEIHGVLDALDKHNLAPAERWFEKRRKALEGVGSSLEFQLARLRFLRFLESADPGQRREAMMYARERVMPVAGGHMRELQELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRISGLSRESILSVAFRAGILALPTLVKMAAVVRGSNLEWNGMRELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 479
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 3.010e-137 Identity = 213/252 (84.52%), Postives = 234/252 (92.86%), Query Frame = 3
Query: 1320 EDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENETMALTL 2075
+DS+AS+P +T+S LVE+H VLDAL+K NL PAERWFEKRR+ALE VGSSLEFQLARLRFLRFL+SADP +RREAM+YARER+ PV+G HMREL+ELMGSLLW GNLEASPYSHLLSLELW RVKESVA+D SRVSGLSRESILSVAFRAG+LALPTL+KMA VVRGSNQEW+GMQELPLEVPLPPGLRYHSMFSCPVSREPS+LDNPPVLLKCGH VLRSSV RL R+GSRFKCPTCP+EQ ENETM LTL
Sbjct: 2 DDSAASIPAETTSHLVEIHGVLDALDKHNLVPAERWFEKRRKALERVGSSLEFQLARLRFLRFLESADPGKRREAMMYARERVMPVAGRHMRELQELMGSLLWSGNLEASPYSHLLSLELWTRVKESVAVDASRVSGLSRESILSVAFRAGILALPTLVKMAAVVRGSNQEWNGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHVVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 253
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A7R9U2J0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J0_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.500e-65 Identity = 135/332 (40.66%), Postives = 188/332 (56.63%), Query Frame = 3
Query: 1083 ILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQE-LPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENETMALTL 2075
+L +L+ D+ L+ E + + K+FHA +SKL K EK D ++V + PPL E L + H YR G ++A E + D S L +H + AL ++NL PA RW +RR LEF L RL+FL L + EA+ +A+ER + GHMRE+++ MG+LLW G L+ SPY L S E W + ++ G GL S L VAF AG+ +P L KM VV S+ +W + E LP EV LPP +HS+FSCPV+R+ + DNPPV+LKCGH +LRSS+ +L R+G R KCPTCP + +E L +
Sbjct: 60 VLERLSRDLKELSPHERMMAAYKSFHAGLSKLQKKVEKLRPSDFDAVGKAPPLPEAPLRELVALHCYRSGYVQTAQELCERWGLDLSDDEVSALCRLHGIASALQQRNLKPALRWVAERRGGT----GELEFMLVRLQFLEILSQPGDAVQEEALAFAQERFPDFADGHMREIQQCMGALLWAGRLDKSPYRTLASEEAWQKSVQAFLEVGCEAEGLPMHSHLLVAFVAGLQFVPILAKMLAVVV-SDGDWTKLGERLPAEVSLPPEFTFHSLFSCPVTRDEADRDNPPVVLKCGHVILRSSLAKLTRAGGRIKCPTCPRDMRADEVQPLLI 386
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A0D2WQV5_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQV5_CAPO3) HSP 1 Score: 226 bits (576), Expect = 2.060e-61 Identity = 127/312 (40.71%), Postives = 189/312 (60.58%), Query Frame = 3
Query: 1134 VGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKA----LHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRG---SNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQT 2048
V E+++ HAT+S+ K +K F D++ P E A L+ I HL R+G F +A F +S ++ +EM+ +++A +Q+LAPA RW + R+ALE +GSSLEF+L +L FLR L+ RR+A+ YAR + P S H+ E++ LMG LL+ G +PY L+ W + + D + G++ +S L V+F AG ALPTLLKMA V++G S+ W ELP+E+ L ++HS+F+CPVSRE +S +NPP+++KCGH V + S+ RL ++G RFKCP CP+EQT
Sbjct: 101 VTEEHRDMHATVSRFGKTIDKAFVTDIDKFA-NPAAFEGAQAALLNEVIAKHLLRQGHFAAAETFIRESGLTLEQPQLGPFIEMYNIMEAFKQQDLAPALRWASENRQALERIGSSLEFKLHKLEFLRRLQI----DRRDALQYARVQFVPFSHSHLNEVQRLMGCLLYYGRAPPTPYMELVDSIHWTEIAHAFTRDCCAMLGMTYDSPLFVSFLAGCAALPTLLKMASVMQGRGASSTLWTSKDELPVEIELGKDSQFHSVFACPVSREQASPENPPMMMKCGHVVCKLSLERLSKNGGRFKCPYCPVEQT 407
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A5J4Z334_PORPP (Protein RMD5-like A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z334_PORPP) HSP 1 Score: 225 bits (573), Expect = 7.360e-61 Identity = 123/308 (39.94%), Postives = 188/308 (61.04%), Query Frame = 3
Query: 1143 ENKNFHATISKLAKAAEKHFGGDVESVRRTPP-LKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQ--EWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENE 2057
E + + I+K+ K +K D+E ++ L + +H AI THL+R G F+ A + ++ A + +TSS EM+++L+ L K N+ A W RE LEA+ S+LEF+L + F+R L D R A+ YARE + + +++ MG LL+ LE SPY+ L+S +W++V E+ + D R+ G++++S L V AG LA+P L K + + N+ EW G LP+E+PLP R+HS+F+CPVSRE S+ DNPP++L CGHA+ ++S+GRLPR SRFKCP CP EQ+ ++
Sbjct: 119 EQREVYNGINKIIKLVDKLVVLDIEKAYQSSAVLDPQKIHVAIATHLFREGMFQLADNYVREAGAPIEANTSSAYHEMYSILEELRKHNVQRAIAWVTAHREQLEAIESTLEFRLHSVEFIRLLLQRD---RAGAVKYAREHFGRFAKSSLPDIQRHMGFLLYATRLETSPYAPLVSETMWSQVIETFSRDSCRILGMAQDSALHVVVSAGTLAIPVLSKASRIRTPMNESSEWTGADHLPVEIPLPQEFRFHSIFACPVSREESTPDNPPMILFCGHALCKNSIGRLPRGNSRFKCPYCPSEQSPSK 423
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A7S1U8N9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N9_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.090e-60 Identity = 132/330 (40.00%), Postives = 177/330 (53.64%), Query Frame = 3
Query: 1083 ILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQE-LPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENETMAL 2069
+ A+LA ++ L + + K+FH+ +SKL K EK D + V R PPL E L + H YR G R+AA E + + L +H + AL ++LAPA RW +RR LEF L RL+F L + EA+ +A+ER + HMRE++ MG+LLW G L+ASPY L E W R + G GL S L V F AG+ +P L KM VV S+ +W + E LP EV LPP +HS+FSCPV+R+ + DNPPV+L+CGH +LRSS+ +L R G R KCPTCP E E L
Sbjct: 48 VAAQLARELEALAPADRAMAAYKSFHSGVSKLGKRVEKARPLDFDVVGRAPPLSEAPLRELVVLHCYRSGYLRTAAMLREHWRLQLAEAEVAALCRLHGIASALQARDLAPALRWLAERRGGT----GELEFMLVRLQFFEILSQPGEAVQEEALAFAQERFPDFAASHMREIQRCMGALLWAGRLKASPYVALAGDEAWDRTIATFMEVGCEAEGLPMHSHLLVTFVAGLQFVPILAKMLAVVV-SDGDWTQVGERLPAEVALPPEFTFHSLFSCPVTRDEADRDNPPVVLRCGHVILRSSLAKLTRVGGRVKCPTCPREMRAEEVEEL 372
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A397JTR3_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JTR3_9GLOM) HSP 1 Score: 221 bits (563), Expect = 4.590e-60 Identity = 118/324 (36.42%), Postives = 188/324 (58.02%), Query Frame = 3
Query: 1122 TLEAVGS----ENKNFHATISKLAKAAEKHFGGDVESVRRTPPL---KEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGS-RFKCPTCPMEQTENETMAL 2069
TLE+ S E+K +SK KA ++ + D+ ++ P KE L I H R G FR F ++ +P Q + M+ +LDA+N NL PA W + +R+ LE GSSLEFQL RL F+++L ++R EA++YA+ HM+E+K LMG+L++ L +SPY+ LS + W ++++ D + G++ +S L ++ G ALPT++KMA +++ EW ELP+E+PL +RYHS+F+CPVS+E S+ +NPP+++ CGH + + S+ +L G+ RFKCP CP+E N+ + +
Sbjct: 61 TLESYASQASEEHKEIQKIVSKYEKAIDRKWKQDI-TIASNPEAFVSKETVLQRTIALHFIRHGKFRLGNTFIGETGLDLPNSLQMQFLRMYQILDAINNLNLEPALLWAKSQRDELERRGSSLEFQLHRLHFIKYLLE---QRRDEALMYAKTNFEYFQARHMKEIKRLMGALIYINRLSSSPYADFLSKDAWTDIQQTFTRDFCNLLGMACDSPLYISVTVGATALPTIIKMATIMKEKKNEWSQQNELPVEIPLTDDMRYHSIFACPVSKEQSTEENPPMMMPCGHVICKESLTKLSSKGNGRFKCPYCPIESMVNQAVRV 380
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: UPI000B8CA0FF (protein RMD5 homolog A n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CA0FF) HSP 1 Score: 218 bits (556), Expect = 4.360e-59 Identity = 125/321 (38.94%), Postives = 181/321 (56.39%), Query Frame = 3
Query: 1083 ILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSR-FKCPTCPME 2042
+L +L + L L + S K + +ISK K EK F D+ R ++ I +H YR+G F ++ + SQ +EMH +L+A+ +NL PA W RE L+ GS+LE +L RL+++ LK+ + R +A+ YAR L P + H+ E+++LM SLLW G L+ SPY+ L S W R+ E V + G S ES LSVA AG+ LPTLLK+A V+ QEW M++LP+ V L ++HS+F CPVSR+ SS +NPP+L+ C H + + S+ +L RS +R FKCP CP E
Sbjct: 57 LLVELKLKLNALGPLHQLESSQKEVNISISKYPKVLEKSFNPDISKAYRNVDFDFHVVNQIIASHFYRQGLFDLGDCLINEAGEPEATEVKSQFLEMHQILEAMKVRNLKPALNWVSANREKLKQNGSNLELKLHRLQYVEILKNGN---RDDALSYARTYLAPFASLHLDEIQKLMASLLWAGRLDNSPYAELTSPSHWERLTEEVTQQFCSLMGQSYESPLSVAVAAGIEGLPTLLKLANVMAAKKQEWQAMKQLPVPVELGKEFQFHSIFVCPVSRDQSSEENPPMLMPCLHVLCKQSIMKLSRSSARTFKCPYCPAE 374
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A9SBV1_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SBV1_PHYPA) HSP 1 Score: 216 bits (549), Expect = 3.800e-58 Identity = 129/330 (39.09%), Postives = 180/330 (54.55%), Query Frame = 3
Query: 1080 GILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSA---ARFSEDSSASVPPDTSSQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSR-FKCPTCPMEQTENE 2057
G+L L + + L +G K + T SK K +K F D+ R ++ I H YR G F A+ S++S+A+ T L EM+ LD L +NL PA W K R++LEA GSSLEFQL +L+F+ L + K R EA+ YA+ P S +M ++ LM LLW LE SPY LLS W +V + G ES L V AG AL +LLK A V+ QEW ++++P+E+PL ++HS+F+CPVSRE S+ DNPP+L+ CGH + + S+ +L +S SR FKCP CP+E T N+
Sbjct: 55 GVLRDLQIKLNEIGPLSRIGVSQKELNTTTSKYGKILDKSFNPDIAKAYRDVEFDSHLINQIIVQHFYRLGLFELGDCFAKESQESNAAAALKT--HLYEMYQNLDQLQAKNLEPALNWARKNRQSLEAKGSSLEFQLHQLQFVHVLTT---KGRGEALEYAKLNFLPFSAEYMSGIQRLMACLLWANRLEFSPYKDLLSSAHWDKVALEFTRQCCNLLGQPYESPLYVTLSAGSQALSSLLKFATVMSSKKQEWAALKQMPIEIPLDNSFQFHSVFACPVSREQSTADNPPMLMCCGHVLCKQSIQKLTKSNSRMFKCPYCPLETTANQ 379
BLAST of mRNA_P-littoralis_Contig16.64.1 vs. uniprot
Match: A0A2K1KG41_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KG41_PHYPA) HSP 1 Score: 214 bits (545), Expect = 1.310e-57 Identity = 124/331 (37.46%), Postives = 185/331 (55.89%), Query Frame = 3
Query: 1080 GILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFGGDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTSSQL----VEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLRFLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPYSHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMAVVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLLKCGHAVLRSSVGRLPRSGSR-FKCPTCPMEQTENE 2057
GIL L + + + VG+ K + T+SK K +K F D+ R ++ I H YR G F S F+++S P+ ++ L EM+ L L ++N+ PA W + R+ALEA GSSLEF+L +L+FL L++ K R EA+ YA+ P + HM +++ LM LLW LE SPY LLS W +V + + G ES L V AG AL +LLK+A V+ QEW ++++P+E+ L ++HS+F+CPVSRE S+ DNPP+L++CGH + + S+ +L +S SR FKCP CP E + ++
Sbjct: 55 GILTDLQLKLTEIAPVNQVGALQKELNTTVSKYGKMVDKAFNPDIAKAYREVESDSHLINQIIVQHFYRMGLFESGDCFAKESQE---PNAAAALKVPFYEMYQNLGHLREKNVEPALSWARRNRQALEAKGSSLEFRLHQLQFLHVLRT---KGRIEALEYAKLNFTPFAAEHMSDIQRLMACLLWANRLECSPYKDLLSPSQWDKVALEFTRESCNLLGQPYESPLYVTLSAGSQALSSLLKLATVMSSKKQEWAALKQMPVEIELDNSFQFHSVFACPVSREQSTADNPPMLMRCGHVLCKQSIQKLTKSNSRMFKCPYCPFETSASQ 379
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LT28 |
| Preferred name | RMND5A |
| PFAMs | CLTH,zf-RING_UBOX |
| Model size | 3523 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0019538,GO:0019941,GO:0030163,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:1901564,GO:1901565,GO:1901575 |
| Exons | 9 |
| Evalue | 5.06e-146 |
| EggNOG OGs | COG5109@1|root,KOG2817@2759|Eukaryota |
| Ec32 ortholog description | Zinc finger, RING/FYVE/PHD-type |
| Ec32 ortholog | Ec-08_003890.1 |
| Description | proteasome-mediated ubiquitin-dependent protein catabolic process |
| Cds size | 1473 |
| COG category | J |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789765.534946-UTR-P-littoralis_Contig16:212788..213021 | 1680789765.534946-UTR-P-littoralis_Contig16:212788..213021 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig16 212789..213021 + |
| 1680789765.5501287-UTR-P-littoralis_Contig16:216732..217104 | 1680789765.5501287-UTR-P-littoralis_Contig16:216732..217104 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig16 216733..217104 + |
| 1680789765.6386638-UTR-P-littoralis_Contig16:227765..229210 | 1680789765.6386638-UTR-P-littoralis_Contig16:227765..229210 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig16 227766..229210 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789765.5593143-CDS-P-littoralis_Contig16:217104..217695 | 1680789765.5593143-CDS-P-littoralis_Contig16:217104..217695 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 217105..217695 + |
| 1680789765.5679247-CDS-P-littoralis_Contig16:218965..219091 | 1680789765.5679247-CDS-P-littoralis_Contig16:218965..219091 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 218966..219091 + |
| 1680789765.5764482-CDS-P-littoralis_Contig16:219376..219477 | 1680789765.5764482-CDS-P-littoralis_Contig16:219376..219477 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 219377..219477 + |
| 1680789765.5848465-CDS-P-littoralis_Contig16:221486..221577 | 1680789765.5848465-CDS-P-littoralis_Contig16:221486..221577 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 221487..221577 + |
| 1680789765.599879-CDS-P-littoralis_Contig16:223638..223728 | 1680789765.599879-CDS-P-littoralis_Contig16:223638..223728 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 223639..223728 + |
| 1680789765.6081066-CDS-P-littoralis_Contig16:225949..226111 | 1680789765.6081066-CDS-P-littoralis_Contig16:225949..226111 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 225950..226111 + |
| 1680789765.6164615-CDS-P-littoralis_Contig16:226911..227072 | 1680789765.6164615-CDS-P-littoralis_Contig16:226911..227072 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 226912..227072 + |
| 1680789765.6264749-CDS-P-littoralis_Contig16:227614..227765 | 1680789765.6264749-CDS-P-littoralis_Contig16:227614..227765 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 227615..227765 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.64.1 >prot_P-littoralis_Contig16.64.1 ID=prot_P-littoralis_Contig16.64.1|Name=mRNA_P-littoralis_Contig16.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=491bp
MSSPNSPATGSPALSLELGKAEARQSSNLRVTTRAIDALHARIAAAKREL DQLQQQQQQQEEASASDLSPGSPSEPAAAAAAAAAAVALKSRTAKSSPSK GEGSASNSPVEAGDDGGAVKKTGLQAMDQEGGDAGGGEGGGGGGGDGDGG GGGDGAVAGILAKLASDVAGLNTLEAVGSENKNFHATISKLAKAAEKHFG GDVESVRRTPPLKEKALHTAITTHLYRRGAFRSAARFSEDSSASVPPDTS SQLVEMHTVLDALNKQNLAPAERWFEKRREALEAVGSSLEFQLARLRFLR FLKSADPKQRREAMLYARERLRPVSGGHMRELKELMGSLLWCGNLEASPY SHLLSLELWARVKESVAIDGSRVSGLSRESILSVAFRAGVLALPTLLKMA VVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSSLDNPPVLL KCGHAVLRSSVGRLPRSGSRFKCPTCPMEQTENETMALTL* back to topmRNA from alignment at P-littoralis_Contig16:212789..229210+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig16.64.1 ID=mRNA_P-littoralis_Contig16.64.1|Name=mRNA_P-littoralis_Contig16.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16422bp|location=Sequence derived from alignment at P-littoralis_Contig16:212789..229210+ (Pylaiella littoralis U1_48) CGAGCCATGATGCGCGGAGCCCCACATTTGCAGGCGAGCGACCTTCTCCC
ACCTGCAGCAGTCAAACATAGAAGTAACGCAAGAGACGGATAGGTATCCT
ACCCGTGCCTTGCGACGGACTTGGGCAATCCGTCAAGTGTGTGGCTTGGT
GGTTGGTGGTGCTCTTTGAGCGGGTTGCGCTGCCGCTGTTCTGCGTGCTG
CTCCTGCTCACACACGCGAGGAATCAGGAACAGGTGTGGAGCTCCAAAAG
AGAAATAAAGAGGTAGATTTTGTTGGTTTTCTGTCAAGGTTCCTGCTGTA
ACAGGCAAAGTCGTCACAGAACAGCTACCTCGACCTGTGCACTGCGCTAC
ACGCGTGCGCCTCCAATGCGTACTAACAGTTCGAACTCACGGGGTGTACA
AAGTAACGCAGGAGCAGCAGTCGTGCGGTAATAAACGGCGAAATAGGCGT
ACCACTGCTGTTGATGATGCTTGCAGGAAAAGTAGGTGAAATCTTGAGAC
AGCTTCTCAAAACAGCTTCAAACAAACCTAGTGAATGATACGTTGTATAA
TTCATACCTTGTACGTGGTAAAAATACGTGGTACGTAGTACAAAAAGAAA
CTCCTGTATTGAGGCCCTTTCTAATCATTTCCGTATTTTTGCCGGGAAAC
AGAGAACCATTCCTGGAGACCGAAAATCTCCGACAATGTGCAGGCGTTCT
TCTCGTTTTCCCTGAAATGAGCGCTGCCCAAAAAATCCCGAAATGGTACT
CATTTCAGGGTTCCCGGGAAATTTGAACCCGCATTTCGGGCAGACGTGCC
TCCAAGTTCGGGCACGCCTGCATAGGTACTCAGTTCACACGAGCTGTCGT
ACGCACGCCATCCCCAGGCCGACACAACCACACAGTGACTTCACAGGGTC
GCCCTCAGGCCATGGCTGATGGGAGGAAGCGCCAAGAGCCTTCCGGACGG
CTGCAGTCCTCGAGTCGAATCAGGCGCCGACACACACAACAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGAGGGCGACGATCATGACTGCCATGA
CTGCCATGGTCGTTGTCGCGAGCGTCGTGGCGTCAGTAGTGGCTCTTTCC
CATGCCTACATCCATGGTGTAGGCTTCGCACGACAACTGCTGCTGCTGTG
GTACGCTTGGCGTCTAGAGTTCGGATGCGGCGTGACTGCTGTGGGCGGGA
ATAAGCTCGGGCTTCAGAACAAAAAACAGAGAAAAGGCATTTTGAAAAAA
AATACTCGCCCAATCGTTTAGAACAGAGCGAAACTCAGTTCATGTTTCAC
GGGAATGGTTATCTGTTTCCCGGCAAAAATCCGGAATGATTAGAAAGGGC
CCGAGAGGGTGGCTCTTGTCAAATTTTTGACCGTATTCAAGATCAAAAAC
AAAATTGGATTTTGATTTTGATTCCGTGTTGGGTCCGATCTGCCGCGGCT
TGCGTTTGTCCAAAATCAAAAGCGGATAAAATAAAAAAAACAGGGGTCAC
GGACAGGTGGTGTGTGATATGAGCATGCCGTGTCTCGATTCCAAGACAAG
TGCGGGAGCTGTCGTGCCTCAAACGAAGAGCACGATGGTGCCCCACGTCA
CCCTGACTCAGGCGCGTTGGTAGTTCTTTGGTTGGGATCGATAACCGAAG
AACTCGGCAAGAGATGAGTAAGTACGTGTTGCACATCTGCCCTTTTTTGG
AGGTAGCGGCCCTGTCAGCTACTCAAACAGCAGTTGAGCAACAAACTTCC
TGCACACTTCTACACACTTGAGTGCTGCTCTCCGGATTCTAGTCGGAATT
CGCTCAAACAAAGTGATCTGTATGCTGCGTGATACCAGCTTTCTCCGGAG
CTAGCACATGTGTACAGCCGGGGTCTACACGTTGTGATGTGGTCAGCTAA
GCAAACATATGTAGTGTGCACCATGTGCTCCCGGAATGCACAGCAAACAC
CTCTCTGTCACATATTCTAGGTCTTACTCGTTTTTGAGCCGCGTTTTGGA
TCTATTGGCGGGAAGGAAAGTGTTTTTTGCTTTCCTTCCCGTTTCGGACG
AATAAAACTGAAATCCAAAACGTGGTGCGGGCGGATGAATTGTTGACCTA
TCAGTGACATATTCCGAGTTTGGTTTTTGATTTTTGATTTTTGAATGGGC
CCAGAACGCTTTGACAAGAGCCACCCTGACTCCCCACTCCCCACTGCTGT
GCGACCCCGGTTGGAGCGTCTATCATATCATACCTACCCGAAAGGTGTAG
AGTGGCGTCCAATTAATGGGATGACAAGACACACACAGTATCAAAGCACG
GCGGCGCTTCAGAACAAGAGCAGGTACATTTCATACCCCTGTATCATACA
AAGCAGACTGCACTGCTGTATTTGTATAATACTCTGTACGAGTAGTGTGT
TTTCACATTTCACTCACCATATCATAGAGTATCATATGGACACAGCGTTA
TCTGACGGAGTTACTCCGCATCGCACATCGCGTGTTGTTGTGATGTACAT
ACTTCGTACAGCAGCACTTCGGTTTTCCTCTTGCAAAATTACTGCTGTAT
GTACCGGTACAACGCAAATCACACTCAGCACGTACTGAGTGTGATATTAT
TTTACAGCAGTAGCTCTGTCTGCTGTATGATATGTGCGTGAATCTCAGAT
CTCGTCTACAGCAGTAAATTGGTAGTCCTGTATGATGATATACGACTCTG
TCCGGGAATAGTGGCCGGTACAGACCAAATGGTTCATAACTGTACAAAGT
GCCCACCAAATGTCTTTTGGTCGCGGGTTCGAGACCCAGTAATGTAGTGT
TTTTTTTCGTCTTCGTTTTTTTTGTTTTTTTCACCTTCTTTTTTTCACTT
ATTTTTTCCATGTTCTTTTTTCTTGTTCGAGCTCATTTCGTTTTTCCTCC
GGGTGGAAGGCCAACTGAAATTGGAATCATACAATAGGGTATTTAACCGC
TAGCCGAAACACTCAACAACCACGAGAAAAAAAATGGAGGTGAAAAATGT
CGTATTTTTCGCTCAGGGCGGTGGATGCAAAATGGCCCTAAAATCCATGG
CTCTACAGTACGTGGTGTTGTGATGGGATGGTATAGCATCACTGGATGGG
ATGGTAAGGTGATGACAGGGTAGTGTGGGAGTGGTGTGGTCAGACCCTAC
TCGGAGCACGCCGAGGCTGGGTAGGTGATGGAGGTGACGAATGGCACTAC
AGCAGTCCGGACCAACTATGTATAACCTGGTCTCCGCGACAGTCGAACTG
TCTGCGGCAGCTGTGTCGACACATCATCGCGGAAACCGTGGAACTCGTAG
CCTGAGGAGCAGAGAGACTAGGAGGTACCACGTTAGTAAGCACCCTCGTC
GACCTTCACGTTGACGCTGGCCGGGAGTGTCGTCCCCAGCCCGCCTGAAC
GTAGACGAGTACCGAGCTTGGCAAAGATGGATGGAACGGAGGAAAATTGC
AGCTCGAACGAAACGGAAGCAAAAAAACTAAAATCGACCCGGTTTGCTCT
GGGATAACCCCACTATCCCCGGGGGGGGGACGTTTGAAGGCTATCCCCGG
GACCTTTCATCCAGTTCATCCACTGTTTTCCCTCCCTCAAGTACACCCAG
TGGTTTACTGACTTATTTTATTGCAATTATTTACACGGAATGGCTCATTT
GTGAAACCGGCCACTTATTCCCGGACGGTTTCAATTCCGCCGCGCTAACT
ATCCCAGCTCATCTCTTTCCAGTGCTCCGGGAGTGCAGTGCTACCGTCGA
TCGTTGTTGTTGTCGCTCTTCGTCGTTGTTGTTGATGATCATTACTGCAA
CCATAAATTATGGTTGTTACCACCACCACCACCACTACTACTACTACTGC
CATGTTCCGTCGTATGAAGCTGTCGTTATTTGTGTTTTTTTCTGTGTTCT
TGCCCACACTCTTCTTCGTTTTACCACGTGTATTGCACTACCAGGCGTCA
GCCGTGTCTGTGCTCTGCAGCACAGCCACAGTCTGGACGGTCATCTCATC
GTCCGCACCAGCATCATTGCATGTGTACGTGATACGTACCAGACGCCACG
AAGCAAGAGCTGGAGCACACCGCCGAGGCTGCGACGGTGGAAGAGCGGCA
CGGTGGTAAGGCACGGCAGCAGTTGCAGAAACCACTCGGCGGAAACCACC
AGCGGGCACCATCAGCTGGACCAAAATAAAAGCAAAATTATCCAGCGGAA
GAAGCGGTAGCAGCAGCAACAGTAGCAGCAAGAGCAGCAGCGCAGCAGCA
GTGTTACGAAGCAACAGCAGAGGCGGCAACGAACGGTTGTAGATAGCACG
TATCATTTGCGGGGGGATGTCGAGCCCGAACTCTCCCGCAACCGGGTCTC
CCGCCCTCAGCCTGGAGCTGGGCAAGGCCGAGGCCAGGCAGTCCAGCAAC
CTCCGGGTGACCACCAGGGCGATCGACGCCCTGCACGCCCGCATCGCCGC
GGCCAAGCGAGAGCTCGACCAGCTGCAACAGCAACAGCAGCAACAGGAAG
AAGCGTCGGCTTCGGACTTGTCGCCGGGGTCGCCGTCAGAACCGGCAGCG
GCAGCAGCAGCGGCGGCGGCGGCGGTGGCGTTAAAATCTCGAACAGCAAA
GTCTTCACCGTCCAAGGGCGAGGGCTCGGCTTCCAATTCTCCCGTAGAGG
CGGGTGATGACGGTGGTGCGGTCAAGAAGACGGGCCTCCAAGCGATGGAT
CAAGAAGGCGGCGATGCAGGAGGAGGTGAAGGTGGAGGTGGTGGTGGTGG
TGATGGTGATGGTGGTGGTGGTGGTGACGGAGCTGTTGCGGGGATATTGG
CAAAGCTCGCGAGTGATGTCGCAGGGCTGAACACGCTGGAGGCCGTGGGT
TCGGAAAATAAGAACTTTCACGCCACGATTTCGAAGCTGGCAAAAGCGGC
AGAGAAGGTGATTTTGGTGTATCCGGCGATCGTTCCGCTCATGTGTGATA
GTATCTACCTGGTACGCGGTTCTTTGTCTTGTGCGTCGGGTTGTGTAGTA
AACTTTAACTTTCGCCCCCTCCCCCCAAACCAAACCAAACCTCCAACCCC
CAACCACCGACCCCCGACATTATGTCTCAGCTCACACGCTGCTGGAGAGT
CAAGAAGAAGGCGGCAGAAATAACAAAAATGCTGCTTAAATCAATCGCCA
TTCGGCCATTTGTATAAATTTTACAAAATTGCAATTTTTTTCAATAATGG
AAGTCTGACTATTGCAGCGGCTGAAGAGGTGGGGTGGGGGGGGTAAAGCA
CCTGATGAAATTATCTCGCACTTTACCCTGGAGGAGACCAAGGAGCAATA
CGATATGGTCGGACATGTTAGAACGAATCCTTTGAAACGCAGATGTTGGG
GGGCTTACGAAAATTGTACAGAGCGTTTTCTATCTTTTTTTATGTATGAT
GTGATAGGAAATACTTCGAAGTAGCTTTTTACTGGTCGGACATGTTAGAA
CGAATCCTTTGAAACGCAGATGTTGGGGGGCTTACGAAAAATGTACAGAG
CGTTTTCTATCTTTTTTTATGTATGATGTGATAGGAAATACTTCGAAGTA
GCTTTTTACCTCTCTCTTGCTCCCATCTTTATTTTCAGATGTAGTCTCAG
AAACCGACCCCCATGCTCAAGGTAGACGGTGTGGATGGATACCCGTCCCT
CCTCCCGACTGAATGAAACACGACGGAAGACGGGCGGCGGCGGTTGGTTT
AGATCGAGTCTGCATTTGCCTAAGGAGAAGAAAAAAAAAACACAAAACAT
TAATGTCCTGTAACATTTTGTTTTTCCTGTCCCCCGGTCCCCCCCTCCCC
CCCGACCGAAAAAAAAAAAAAACGCGCCAGTCAACGCCAACGCGGTTCTT
AAACCTCCTTCTTGTGTAGGTAGAGGAAAAAAAGGTGGGGGTGGAGCCTT
TTGTTTTCTGGCATTTTTTTTTCGACACGGGCGGGAACATGCACGTGTTG
CATACCCCGTGTAGCATTATGTGCGACAGCGACAGCCCGCCCCTTACACC
CGGCATCAGCGTTTCGTCCCCTTCTTGACGTGGACATCAGTCAATGACAT
CGCACCTCGGAGCTACTGTAACTGCTGCTGCTGTCGTTGTGAATCGCACT
GCTGTACTGCTGCTGTTGTACTGCTGTGTTGTTTGATGCGTCGTTCGTTT
ATTGGTGTTTTGTTTTGTTTTTTTAAGCATTTCGGCGGCGACGTGGAGAG
CGTCAGGAGGACGCCGCCCTTGAAGGAGAAGGCTCTGCACACGGCCATCA
CCACGCACCTCTACCGCAGGGGAGCCTTCCGCTCGGCGGCGAGATTTTCG
GAGGTGCGCAGAAAAAAATATATATATCGAAGTGCCACAGTACGTTGTGG
TATAATACGTAGCGCCGCATTACGGGTACTAGGGTTGGGGTAGGGGGGTG
GGGGATTCTTATAAGTACGAGTATTTCTTCTTGGTGTTGACAGTTTAATT
GCGAATATAATTCGTATTATTTCGTATTTGAAAGTATGTATGTCGCTACT
GCTGTGATATTCACATGTCGGTTTCAAATTGTTTGTGCTCTTTTGTTTCG
TTTTTTCCGTCGTTTTTTGTGTTTGTTTTGTATTGCAGGACTCGTCCGCG
TCGGTACCGCCGGACACTTCCTCCCAGCTGGTGGAGATGCACACGGTGCT
GGACGCGCTAAACAAGCAGAACCTTGCTCCGGCAGAGAGGTGCGCAACAT
ACACAGCTAGCAGCGGCTGTTGTTTCTGACTGACTGAAGTCGACCAGTCT
TCGCCCTTGCTTTGCTGTAATTCGTGCTTGGTTGGTGGGCGGTTGTGCAT
GTACGGTAGCGTTCGGCCTGTTTTTTGTTAGCCGCCCGCGTTGGGTGCGT
GTGTCTACGGTAGGGTACTGCATTGCTGTCTGTCGCTCTCTTTGTCTTGC
CGTGCCAGGGGAAAAACGTTTTGTTTTTCGGGCAGACGCCAAAAAGGGGT
ATATCGCCTGGTTTCCGCGCCACAAAGCGGTACGCCAAAATACACCTGGG
CATTGAAGCCCCGTTCGCGTCGCTGATTGGCTGGTTAAACCTCGTATCGC
TTTTTGGCACCAGCAGTCGGCGGTACACCACATCTGGGTTTCTCACGTCG
GCTGTCGCCGCTTTTTGGCTCGATCCGAACCGCTTTCTGGCGGGATATAT
CCCAGGCTATTCGCCCAACAGCCTCTTACACTTCCAAGTCACGCATCAAG
CAAGGAAGCCACGTCACCTAATTACAGAGTCCCTGGCCCTTTAGTCGGTG
AAGAACCTCTCGGCACGTTCTCCGCACGTTTTCTCTACACCCGACCCCTT
CGGGACCTTAAAGCTTGCTGCAAGCTGGTGCGTGCTTCTGCGGTGCTCTG
CAAGAAGCTGGCAAGAAGGCCAGAACGTTTACCACTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGTATAACCAGAAGAAGAGAGCAGTGTTGTAG
TGGACCCACACACACGAAGCACGAAGCACGAAGCACGCATCAGTTGCAGC
AAGCTGTAAGGTCCCAAAGGGGTCGGGTGCAGAGAAGATGCGCGGAGAGG
TTCTTCACCGACTAGAGGCCGGAGGTTGTGTAAAGGGGTGACGTGGCTTC
CTTGGTTGATGCGTGACTTGGAAGTGACAAAGGCTGTTGGGCGAATGGCC
TGGGATATATCCCGCCAGAAGGCGGTACGGGTCGCGCCAAAAAGCGGTGA
CGGCCGACCTGAGAAACCAAGATGTTACGCACCGCCGACTGCTGATGCCA
AAAAGCGTCACGAAGCTTAATCATGAACCAGCCAATCAGCGACGCGAACG
GGGCTCAAATGCCCAGGTGTATTTTGGTGTACCGCTTTGTGGCGCGGAAA
CCAGGCGGTATACCGCTTTTTGGCGTCTGCCCTTTTTTTTCATCGCCGTC
GCCGATTCGGTGCTTGCTTCTTGATGCCTCCTCGGCGGGAGAGCAGGAGA
GGGAGGGAGAGAGAGAGATATAACAAGAGGGAGAGAGAGGGAGAGAGAGC
ACGCTGGACGTCTCTGATGTTCTGGGCTGTGTGTTTACGGGCCCACGCGT
TTTGCTGTTTACCCGGACGTGGGGTGGGTGGACGATTCGACCCTAGGCTT
GATTTCGCGAACACCCCACCTCTGTCCCTGCCTTTGCCACCTTGAATAAC
GCCCACATGTTTGGTTCTCGTGTGGTGCTATATATACATGTAGCTCTAGA
AGGGGCAGGAAGGGTAAAAATAATGGAGTGATTTATCAACAAATGAGGAG
TAACCCCCCCCCCCCTCCGCTCCTGCCGCCGCCACCACCGCCAACACCGG
CGCCGCTCCTTTTCGCGGACGGGGCAAATATATATAAATGTCCTCACTAC
GTTCTCGTACCACACGCGTCAATCATACCGGCACCTTTGATCATGTTGCG
GAGAGGGTCACAGACTAGTCTTACGAATCGTCCCGGGCAGCCTTAAACAC
TTCCTTCCATCATACCTGGTACTATGTACGTTTTATGACATCGCTATGGT
ATCATGTGGGCGATGATATCATGTGATGGTACACAGTACACAAACAGTAG
TAGTAACATCAATTCGTATGATACGTATTATACAGAGAATCATCAACACC
CTCGGATTTGTTTTTTGTCCTTGAAAAATTCCGTTTTTCCCGCCACGCCC
GATCGATGGATCGATCTCTTTTATTTCACTCGCATGCGGGTCCCACAGGT
GGTTTGAGAAACGACGGGAAGCGTTGGAAGCCGTGGGCAGCTCGTTGGAA
TTTCAATTAGCCCGGTTACGTTTCCTCCGTTTCCTGAAGGTGAGAGAGAG
GGCGGAAAGGGGGGGGGGGGGGTCACGTGAAATGTATGTGAATCTCGAGG
GGGAGGGAGGGGGGTGCAATGGAGGGCACGTGGCGTGTCCCCTTTGTTGT
TGTTTATTGATTCGCGGTATGATACAGCTAGTTTTTGTTTTTGTGCGCTT
GGTTGTTTTCGATTGATGTCGTGTAGAGGTTGGGAAGAGGGTAGGTAGTT
TTTGTTGTTGTTTTTTTCCTTATCGTGAGTACAGTATCACATGGGGAAAA
CCAAGATTGATGCAGTCATGTGGGTGCGGGCCGGAGTTAGATGTGATCGC
GATCCAGGTATTTGTTTCCTGCCCTCGTGTGACAAAAAAAAAAGGGCGGT
ACGGGCCTTGACGGCTGTCTGTAGGATTGTGGTCGTGTATGATGGGTATG
ATATTGAGCCCCCTCCCCCCCGTGGATGATAGCGAGTACCCCCCTTCCCG
TTTTCGCTTTTTAACCCCATCACATGATGTTCTGGTCTACGATTGTTTAT
GGTACAGTGCTACTTGCACACTTTCTGGCTGACTAGCTGGCTAGCCGCAA
AATCTCGCTGCCCCCTCCCCCTCCCCCCTTCGCGTTCGATCCTGAGCCAA
CAAATGCCCGCCCGCACCCACACCCACACCCATTCCTGCAACTATCATAG
TCGAACACGTCGCGGCGCCTAGCGCTTCTTCCTGGTTGGTGCAAATGTTG
AATGTTTTCGTCTTGTGGCCGGTGAAAAGCCGATCAATTCATGCTCCTTA
CCGGCATCGTACGTCGTATGATACACATATACCGTAATCATGCGAGTCAT
CGCACCCCCGTGTTAGCTTCTTTGCATTCCGTATTGCTCCACAACCAGGA
GAGTACCACTGTCGAAAAGGGTGGTTTTGGAAAGATCTCGTCGAGAGCTT
TCGTATGACGGGTCGTTTGGTGTTCGCACTCCCCTGGTTATGGAGCTATA
CGGAATGCAAAAAAGCTAACACGGGGGTGCGATGACTCGCATGATTACGG
TAATACACGTATCCCTAAAAGTACCATGCACCTAAACATTACACACTTTC
GAAGTACCTGCATGCATGTATCACATACATACAAACGAGCAAACAATTCG
TGAATACTGCGGCCATGCACTGCACTTGATCGCACGAGACGCACTGAAAC
ATGAAACGCACACCAACGCACACATACATACATACATACATACATACATA
CATACATACATACATACATATATATACACATACATACATACATACATACA
TACATACATACATACACACGAGCATGCACGAACACACGCACATACACGCA
TTCCAAACAGCGCATCTTCCTCTACCCCTCCATTTCCTCCCCTCTCGCAC
TTGGTTGTTCCTTGCTTTCGTCTCTTCACACACCTCGCTTGATCCTCGAT
CTCTCTTTTTTTCTTCCAGGAGAGACGTATCGTCTCGTCAATTTCATGCA
CATTGCAAGCCTTGCGATAGCATAAAACTTCGTGTATATACATACTTCGA
AGTGTATACATACTCCGGAATATTTACTTTCATTTTCGATTGTTTTGTCG
AGTATTTTATTTCGTCTTTTGCGTCTCGGCCACGACGACGGAACAAACCT
CTTGCGTGGGCAGGATCTAAGATACTCTGTGTACGCCTGTTGTTCTTTTG
TTTTTCGGTGTGGATGGCCTTCCTCCGTCACGTTTCTTGTTTTCTTTTTC
ACCTACTTGTATACTGTATATGACCTATGTATATCATAGCACTTTGTGTA
TGTGCGCCCGCTGGTTTTGTGGGAGAATAAAAAATAACGACAACAACAAA
CAACCACCAACAACAAGAACAATGAGAATAAAAAACAACAACAACTTTAC
AGCAATACCAAACACGCGCACAAAAGACAAGCACACATGCACCCATGGCC
ACGAACACAAACAGCCGCGCGGCACCCCCTTGCCATATCGTACTTCCATA
CAGCAGTATTCTGTACTTTTTTTTTTTCTGTGCGCCTACCATATCATACC
TGCTGCTGCTGCATTCTTTGTTCTTTGTTTTCTGCAATTCCTAAGTACAG
AGCGCCGATCCGAAGCAAAGGCGAGAAGCGATGCTGTACGCGCGGGAGCG
TCTAAGACCGGTGTCGGGGGGGCACATGCGAGAGCTAAAGGTGAAACGCG
ATGATTTTTTTTTAATTTTGTTTATTCTTGACTTGTTGTTATTTCCTGAT
TTGTTTTGATTTTTTTTTTATTCTTGTTCTTGTTCTTGAATTTGAAACTG
GATTCGAAGTCGGTATATACCGTAAACGTCGGAGTTTTCCCCCCGGAGGG
GCCCGGAGGGGGGATCTTTTTTTCGGCTGAAATCAAACCCCCCGGGGGGA
AATTGACGTACCGGGGGGGGTTGGTAGTTCTCTTTTTCCCCCGGGGGGTT
GTGCAGAATAAATGGTGGGTCCTACACACGCAGAGTTGCAGACCGTGATG
GATAATGTTTACGAGCAAGCATACAAGCGGCAGAAGGGTACGGAAAAGAA
CAAGAGCACAGAATGTGAAGAGAAAGAAGAAAGCAAGGAGGGCAGCAGCG
CGTAGTAGGTACCCTGAACACAAAGTGGCATGCCAATCGGCCGCGGTGTA
ACACACATCTCGCTCGAAGCGCAGAGGTGCAAATGATTTTTCTGGACCAT
GTCATGCTTTTGTGCTTTGTGATGCAAAAAAACGACTCAGGCACACGTGA
AATACATCCCCCCCTGGGGGAACTCGTGAAAAAAATGTCCCCGGGGGGAA
ATTGACGTACCCCGGGGGAGCTTTTTTTTTTTTTGGCGAAGACGATCTAC
CCCGGGGGTAAATCAAAGAATGCACGGTGGCAGGCTGAAAAGGCAATGGG
GGGGGGGGGGGAAACTCGAAGGGGGGGGGTTAATCCCGACGTTTACGGTA
GGTGCGTAGTGCGGTTGAAATTTGAAGTTGGCTGTCCTTGTACTGCTGTA
CTCGTGTATTTTTTTTTTTCTTTTCCGTTTCACGAGAAAAAAAAGTCGAC
AAGGGGGAACAAAAGGACGGTCGGAACTTTCTCGTGGATAAAAATTGAGG
CAAGCGCCGCAAAAAAAAGGAAGGTGTGGAGAAATTTGAGGCAAGTACCG
CAATAAAATGAAAAAAAAAAGGTGTGGAGAGAAAAAGAAACTGGACCTGC
CTCTGTCCGTGTGACCAACCGACCTCGGCTGGTTCGCCTATGCATACCTT
ATTTATATCGAAAGGTCTAAAGACTGGCGTCTATAATAGATGGGACGACG
GCACACACACACACAAGCACTTTCAGCCAGCAGAGCAGAACAGCAGTAGT
GCTGGATCATACTGTACCGATTTGGATTGGAACGGTTTTGGATTCCCGTC
TCCGATTTATCACTGTCATGTCTCACGGTCTCGTGAAATTTCCGAGAATT
CTCCCGAAAATGTATTACCTATTGCAGCGAGTCGCCTGTGACTCAGGGTG
ACGGGCCGAACAGTAACAAACAAGGGCCAAACGGAACAACTTATGGCCGT
CCATTTTTGTTGTTTTTTATTTTTGTGTGTATTTGGTGTTCGTTGTCTCC
TTTTTTTGTTTGTTTTTGTATGTTGTTTGTTCTCAATTGCTTGTCTATGT
ACTCTTTCGGTCACCATACACAAGAAAGACAGACAGCAGTGATTCGTTGT
TTTTTGCTAGTGGCTCGTTTGTTGAGCGCCTGGTTTTGTCGTCCCCACGG
GCTGGTTGGTCTTGGATGATGGGCTCAAGCTGTGAGAGAGAGTCAACAAC
AGCAAGAACAACAAGTTTTTCTTCTGGCCTACCCTGTACTTTTTTTCCGT
GACATCGCAAGCGTTCCCCCCTCCAGTTTCTCTGTCGCTGGAAACAACGA
AGACCTCGAAGACAAACAGTGCACTTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTATGTCTGTTTGTCTGTTGTCTCTTCGTCCCTCTTGTTAACGCGA
AGGCCCGAAGACAGGCACACACACACAGACAAAACACACTCGCCAAAACA
CAAAATAATCAGCACAAGTCGTTTTTCCCCGAATGTTCTGTCTTCTCCTA
TGCCTCTCGGTAGGGTGACGTACCAAAACAAAACAAAACAAAACAAAACA
AAGCAAGGCAAGGCAAGGCAAAGCAAAGCAAGGCAAGGCAAGGCAAGGCA
AGGCAAGGCAAGGCAAGGCAAAGCAAAGCAGAGCAACAGCATCCTATCAT
ACACTACCTGCTTTTCCTTCTGTCTCCGCTTGTCTTTTCTCACCTCTCGG
TAGAGTGAAAAACCGATCTCACGCACGGATCAACATTTCAATAGCACGCA
CGTATTGTACCATACCCTCGCGCACCCCCTCCACCCATTCCAACCACCCA
ACCCCAACCAGGAGTTGATGGGGAGCCTGCTGTGGTGTGGAAACCTGGAG
GCGTCGCCGTACAGCCACCTCCTGTCGCTTGAGCTGTGGGCGCGCGTGAA
GGAATCCGTGGCGATTGACGGCAGCCGAGTTTCCGGGCTGTCTCGGGAGA
GCATCCTGTCCGTGGCGTTTCGGGTATGTGGGAGGGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGACAAAGGGAATTGCAACTCCACTC
TGTTTGAGTTTTACTGCATTTTGGGGCACTGAGGGCGAAGAATGAGAGAG
GACGAGAGAGAGAAATTGTGTGTGTGTGTGACATATGGAGAGAAAGAGAT
AGGGAGAGAGAGGGGGGGGAAGAGTTCAGACCCCTTTCCATTCTAATGCG
TTACATTGTGCGAAACTTGAAGCAGTGCAAATTTTGAGAGATGGCGACAA
TAATCCATGTAATATATGTTTGTTGCGTTTTAAATACACGTGCACAGCAT
ATACTTCGTATACAATTTGTTCGTGTTTTTTGTTTGTGAGCAGATATCAC
ACTAACCGGCTGAACCAATGAAACCTCTCGAGTTTTAACAACGGGGTAAA
GAATGTTCAATTTTTCGCCATCATGGTGTTGTTGTTGTTGTTGTTGTTGT
TGTGGTTGATTCTGAGTTCAGCTCGTCACCAAGATCGTGTGTAAGTGCAC
ACTGACAGGAGGCGTGTGTGTGTGTGTTTTTATTCATTTTCCGGTATATA
CCGGATTTACGAGCAGCAGGGGCAATCAACACCGATTGACAAATAGATAA
TCAAAAATATTAAAATATAATACCAAGATGTGTGTGCGTTCGGTCATTTG
TTCCTTTATTTCTTCATGATGGGCGGCTGGGGGCAATCAACACAACTTAA
TGCACTTTACTGACAGGAGGTGCGTCTGTGCCTGTGCATGTGTCTGTGTC
TGTGTCTGTGTGTTTTCTCTCAGGCCGGGGTCCTAGCCTTGCCGACGCTG
CTGAAGATGGCGGTAGTGGTGCGGGGCAGTAACCAAGAGTGGGACGGCAT
GCAGGAGCTTCCGCTGGAGGTGCCGCTGCCGCCGGGCTTGCGCTACCACA
GCATGTTCTCCTGTCCGGTCTCCAGAGAGCCGAGGTGTGTGTTTATTGTT
ATTGTTGTTGTTGTTGTTGTTGTTTGTTGTTGTTGTTTGTTGTTGTTGTT
TGTGATTGTTGTTGTTGTTGTTGCTCTTGTTGTTGTTGCTGTTGATGTTG
GTGTTGGTGTTGGTGTTGGTGTTGCTGCTGTTGTTGTTGCTGTCGTTGTT
GTTGTTGTTGATGTTGATGTTGATGTTGTTGGTTGGTTTGCAATGAACAA
CTCGTTGCCATTTCGTTTTTTGGGCGATAGTCTGACTTCAACGCCCAGCT
GGTTCCTCGCATCAAACGGGCTTGGAGTGTGACCCGTTGAACCGCTGCCG
CTGTACCATGCCACATACATCCCATAAAGATGTGTTCAAGTACATATGGA
CAACCTAATTTGAAACGCGTAATCGAACTAATTGCCCCCCCCCCCGCGCG
CGCCCTCTCCCCGCCTACCTCTCAACACCAAATCCTCCTCCAACCACCAT
ATCGTCATTACAAATCACGATCACAATCGGAAACCACGCTCTCGCGCGCA
CACAAAAAAAAATGCTTCGTTTATAGCTCCTTGGACAACCCGCCGGTGCT
CCTGAAGTGCGGGCACGCCGTGCTCCGGTCAAGCGTCGGACGCCTGCCGA
GAAGTGGGTCTCGGTTCAAGTGCCCCACTTGTCCCATGGAGCAGACGGAG
AACGAGACGATGGCTCTCACTCTCTGATCTCATTTGATCTGATGAGATCT
GACCTGATCTGGTTTGATTTGATTTGATTTGATCTGATTTGATCTGATTT
GATTTGATCTGATTTGATTTGATCTGATTTGATTTGGTTGGTGTGGCGGT
GCGGTGTGTGTGTTGATTTTGATCGGCCGTATCATACCGCTGCTGCACGA
CACCGCCCTTCTTCGTCCCGTGGAGCGGAGCGGGTAGACGGGCGGGCGGA
GAGGAACGAGGTTTCTCGTTCTCACTTTTCAGCCTTTCTGGCAGCTGGCT
GCCACAGCAGTTTCATGTGTGTGTGTTTTCTCGGGCTGAAACCTGCCCCC
ATATGGAGCAAGCAGACTCGAAAGCGAGGCTAGAAGTAGTACTCGCTTTC
CCTTTTCTGGCTGCCGGCTGCTACATTGTTTGATGGTTTTTCGTCGGGAT
GAACCCTGCCCCCCTGTGGCAAGCAGACCGGGCAAGCGAAAAAGAAGAGG
AGGGGAAGCGGCAGCGACCACCCCTCTTCTCGATTCTCTCTCCGATTGGT
TTTGATCAGGCTGAGAGACCCGTCCGTCCTTCCCCGAGAAGATTGCTTAC
AAGTATCACGTCATCGGCGTCGTAGAATGCGGCTCCCACCCACCTGCCCG
TCTGACTTGGACCCTGACGGGTTTCTTTTTTAGGCTCTGAGCCGTCCCGT
CTCTCCCCCGGACAAGACGAGACAAGACGCGCGCGGGACGGACGGACGGA
CAGACGAGGCCACACATGGTCGTTCCTCGCGATTCTTCCTCAATCTTTTG
ATTTTTTTGGATTGGCGGAATCCATCCCGTCCCGAGAAGGAGTCTTTCCG
GTCCCGAGGAGGAAAATCCATCCGGTCCCGAGGAGGAAATCCCATCCCGT
CCCGAGGAGGAAATCCCATCCCGTCCCGGGGAGGAGTCCATCCGGTCCCG
GGGAGGAATCCATCCGGTCCCGAGGAGGAATCCATCCCGTCTCGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGCGACGATGATCGGGAGCAAATTTTCC
GCCTGTCTGTCTTCCTTCGGGGGACCTTTTTTTGGTCGTTTGGCCCGACC
TCGTCTATCATTCGTGGTCGCAGGGTGGGGGGGTTGAGACAATGATGGAT
CCCGCTTCTCTCTCCATTATTTTAGTGTTGGTTGGCTGAAACGTCTTGCC
CGGTGGGGGGTGGGGGGGGTGGGGACACGTTGAGCGTGCCGAGACCGTGA
AATCCGTCCCAAAACCCTCTGACTTGGACTGACGAAGTGAGTTTGAAAAT
CGTTGAACGGCACCTGACATTTTGACATTGGAGCGTAGTAGTGCTCTTGG
GGTGCGAGGGAAGAGGAGGAGGACTTTTGACACCTCATGGTTAAGGAGGC
GTGTACCTGTGTGTGTGCGTGTGTTTTGTGCGAACATCGGAAACCGCACC
AACAGCAACACGAGTAGGTGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig16:212789..229210+ >mRNA_P-littoralis_Contig16.64.1 ID=mRNA_P-littoralis_Contig16.64.1|Name=mRNA_P-littoralis_Contig16.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1473bp|location=Sequence derived from alignment at P-littoralis_Contig16:212789..229210+ (Pylaiella littoralis U1_48) ATGTCGAGCCCGAACTCTCCCGCAACCGGGTCTCCCGCCCTCAGCCTGGA GCTGGGCAAGGCCGAGGCCAGGCAGTCCAGCAACCTCCGGGTGACCACCA GGGCGATCGACGCCCTGCACGCCCGCATCGCCGCGGCCAAGCGAGAGCTC GACCAGCTGCAACAGCAACAGCAGCAACAGGAAGAAGCGTCGGCTTCGGA CTTGTCGCCGGGGTCGCCGTCAGAACCGGCAGCGGCAGCAGCAGCGGCGG CGGCGGCGGTGGCGTTAAAATCTCGAACAGCAAAGTCTTCACCGTCCAAG GGCGAGGGCTCGGCTTCCAATTCTCCCGTAGAGGCGGGTGATGACGGTGG TGCGGTCAAGAAGACGGGCCTCCAAGCGATGGATCAAGAAGGCGGCGATG CAGGAGGAGGTGAAGGTGGAGGTGGTGGTGGTGGTGATGGTGATGGTGGT GGTGGTGGTGACGGAGCTGTTGCGGGGATATTGGCAAAGCTCGCGAGTGA TGTCGCAGGGCTGAACACGCTGGAGGCCGTGGGTTCGGAAAATAAGAACT TTCACGCCACGATTTCGAAGCTGGCAAAAGCGGCAGAGAAGCATTTCGGC GGCGACGTGGAGAGCGTCAGGAGGACGCCGCCCTTGAAGGAGAAGGCTCT GCACACGGCCATCACCACGCACCTCTACCGCAGGGGAGCCTTCCGCTCGG CGGCGAGATTTTCGGAGGACTCGTCCGCGTCGGTACCGCCGGACACTTCC TCCCAGCTGGTGGAGATGCACACGGTGCTGGACGCGCTAAACAAGCAGAA CCTTGCTCCGGCAGAGAGGTGGTTTGAGAAACGACGGGAAGCGTTGGAAG CCGTGGGCAGCTCGTTGGAATTTCAATTAGCCCGGTTACGTTTCCTCCGT TTCCTGAAGAGCGCCGATCCGAAGCAAAGGCGAGAAGCGATGCTGTACGC GCGGGAGCGTCTAAGACCGGTGTCGGGGGGGCACATGCGAGAGCTAAAGG AGTTGATGGGGAGCCTGCTGTGGTGTGGAAACCTGGAGGCGTCGCCGTAC AGCCACCTCCTGTCGCTTGAGCTGTGGGCGCGCGTGAAGGAATCCGTGGC GATTGACGGCAGCCGAGTTTCCGGGCTGTCTCGGGAGAGCATCCTGTCCG TGGCGTTTCGGGCCGGGGTCCTAGCCTTGCCGACGCTGCTGAAGATGGCG GTAGTGGTGCGGGGCAGTAACCAAGAGTGGGACGGCATGCAGGAGCTTCC GCTGGAGGTGCCGCTGCCGCCGGGCTTGCGCTACCACAGCATGTTCTCCT GTCCGGTCTCCAGAGAGCCGAGCTCCTTGGACAACCCGCCGGTGCTCCTG AAGTGCGGGCACGCCGTGCTCCGGTCAAGCGTCGGACGCCTGCCGAGAAG TGGGTCTCGGTTCAAGTGCCCCACTTGTCCCATGGAGCAGACGGAGAACG AGACGATGGCTCTCACTCTCTGA back to top
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