mRNA_P-littoralis_Contig16.56.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: D7FYE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE1_ECTSI) HSP 1 Score: 294 bits (752), Expect = 3.730e-95 Identity = 147/225 (65.33%), Postives = 172/225 (76.44%), Query Frame = 1
Query: 526 RTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRVFDTLHAIGPTKLLGDDSVWFSQQFDDWNVTAAFDEGPAAFVVVQSTAQVGILRILRKLRQGLEGEGGGEEHS--TSSGTPSLLRRRIVR---QMELLLSGESR 1185
+TPFY+TLDADVLC+K +L+EEDLLPQGKGNYVPEGRN HP WWS AA TL VEENP+GGGFGVTPAVLST GA L ++RLR VHG + F R + D W V RWW+EYTLYRTALDH+ VFDT HA GPT LLG+ SVWFS+QF+ WNVTAAFD+ PAAFVVVQST VG+ ++RK+ +GLE EEH T G S LRRRI R +M++L S S+
Sbjct: 27 QTPFYLTLDADVLCSKDQLTEEDLLPQGKGNYVPEGRNVHPAWWSEAAKTLGVEENPIGGGFGVTPAVLSTRGAALALERLRAVHG-KEGFLRTVLDGWWVEPGRWWSEYTLYRTALDHWGVFDTFHATGPTALLGETSVWFSEQFEAWNVTAAFDDDPAAFVVVQSTTDVGVTGVMRKINRGLE-----EEHDPLTPLGAASSLRRRIARGMAEMDMLCSSASK 245
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A6H5JS78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS78_9PHAE) HSP 1 Score: 215 bits (547), Expect = 4.370e-65 Identity = 113/189 (59.79%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 628 EGRNAHPGWWSHAAHTLDVEENPLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRVFDTLHAIGPTKLLGDDSVWFSQQFDDWNVTAAFDEGPAAFVVVQSTAQVGILRILRKLRQGLEGEGGGEEHSTSSGTPSLLRRRIVR---QMELLLSGESR 1185
E RN HP WWS AA TL V ENP GFGVTPAVLST GA L ++RLR VHG + F R I D W V RWW+EYTLYRTALDH+ VFD H GPT LLG+ SVWFS+QF+ WNV+AAFD+ AAFVVVQST VG+ I RK+ +GLE EEH S G S LRRRI R +M++L S R
Sbjct: 9 ERRNVHPAWWSEAAKTLGVVENPTSEGFGVTPAVLSTRGATLALERLRAVHG-EEGFLRTILDGWWVEPGRWWSEYTLYRTALDHWGVFDIFHTTGPTTLLGETSVWFSEQFEAWNVSAAFDDDAAAFVVVQSTTDVGVTGITRKINRGLE-----EEHDPSPGGASSLRRRIARGMAEMDMLSSSAQR 191
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A8J2SU67_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU67_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.790e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1
Query: 415 MVDEKQLLSAVGVDKLESRWYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPL-GGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRVFDTLHAIGPTKLLGDDSVWFSQQFDDWNVTAAFDEGPAAFVVVQSTAQV 1038
+++E L + + ++ W+TY LQM +KLL + + T +Y+T+DAD+L G P G+G +V E R HP WW +A L + E+ FGVTPAVLST G+ +T +R V D++ +R +WS G WW+EYTLYR ALD +FD +H ++ + VW+ W+ AF F +VQST Q+
Sbjct: 237 VINESSLFNGI----VKQTWHTYALQMAVKLLVAQRVTTNYYVTVDADILLV-GTFDAALFFPGGRGTFVEEHRGVHPHWWRGSADILGLTEDDYPNAAFGVTPAVLSTIGSVITTSLIRDVFED-DDWQQRWLGSWSNG--TWWSEYTLYRLALDIRGLFDNIHVASESETFCN-PVWYHGDLP-WDAVGAFRNKKCVFSLVQSTTQL 435
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A835YYB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB4_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.400e-27 Identity = 94/287 (32.75%), Postives = 124/287 (43.21%), Query Frame = 1
Query: 409 IIMVDEKQLLSAVGVDKLESRWYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKG---RLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPLGGG--------------------FGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVG----------------GERW-WTEYTLYRTALDHFRVFDTLHA------------------IGPTKLLGDDSVWFSQQFDDWNVTAAFDEGPAAFVVVQSTAQVGILRILRKLRQGLEGEGGG 1095
I++V E LL +W Y +QM +KLLA+ L+ T FY+TLDADV+ T G + + LLP +G Y E R H WW+ + L + + FGVTPAVLST GA LT+ RL K G + + DAW+ G W W+EYTLYR ALDHF +F+ LH L WF + W+ AAF + F VVQSTA + + R +RQ L+ GG
Sbjct: 45 IVVVPEGTLLPPGSP---RGQWSGYAVQMLMKLLAAQLVPTDFYLTLDADVVLTFGGGASAALDALLPLPRGAYANEPRAVHAAWWAASQRVLQLPSSSXXXXXXXXXXXXXXXXXXXXXXXXFGVTPAVLSTPGALLTLGRL-KAQYGEQTYAAALLDAWTTGTAPAAXXXXXXXXXXXXXAWLWSEYTLYRLALDHFGLFEALHVDTSMAAAEVXXXXXXXXXXXALPRLSAHDAWFPEDLP-WDAAAAFADAGHVFSVVQSTAGGDVAALWRAVRQQLDRRRGG 326
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: F0YK38_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK38_AURAN) HSP 1 Score: 98.6 bits (244), Expect = 2.180e-18 Identity = 72/237 (30.38%), Postives = 107/237 (45.15%), Query Frame = 1
Query: 409 IIMVDEKQLLSAVGVDKLESRWYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRVFDTLHAIGPTKLLGDDSVWFSQQFDDWNVTAAFDEGPAAFVVVQSTAQVGILRIL----RKLRQGLEGEGGGEEHS 1107
I +V+E L + ++S W Y LQM LKL+ + + T +Y+TLDAD + G L +L P GKG + E R+ HP WW ++ L + E+ +P DA S G WW+EYTLYR ALD +F LH T+ L + ++WF ++ WN +AF+ F + TA + ++ K R+GL +GG S
Sbjct: 3278 ISIVEESSLFDGM----IQSTWPKYALQMALKLVVAQRVTTKYYITLDADNIVV-GPLDLTELFPGGKGVFAAEPRSIHPHWWDGSSQVLGLNED-------ASP------------------------------DAMSWGFRMWWSEYTLYRLALDKRDIFWELHTPSTTEPLCN-AIWFQEELP-WNSRSAFENKSCIFSLAPMTAALSPSEMVWMRSAKARKGLRNDGGDAAQS 3470
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A7Y2IJR7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y2IJR7_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 1.420e-14 Identity = 72/229 (31.44%), Postives = 98/229 (42.79%), Query Frame = 1
Query: 472 WYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVE-----------------ENPLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWS-----VGGERWWTEYTLYRTALDHFRVFDTLH-AIGPTKLLGDDS-VWFSQQFDDWNVTAAFDE--GPAAFVVVQSTAQVGILRILRKLRQGLE 1080
WY Q +KL+A+ TPFY+TLDADV+C K +S DL+P G+ R+AH WW +A L V P G VTPAVLST E R I W V G+R +TEYTLY L+ + D +H P G + VW + QF+ W+V F + P F V Q+ + ++ ++ LE
Sbjct: 81 WYR---QQIIKLIAADRFATPFYLTLDADVICCKP-VSYSDLVPGGRAAITMTSRSAHSDWWYQSAAILGVRVRVRRLAPRIWRPRWWMSQP---GMSVTPAVLSTLHVR--------------ELMREIERKWKKPVARVLGDRPFTEYTLYYLYLESNGLVDVVHDRERPVSCRGQGANVWSADQFNAWDVGRLFGDLRQPGFFTVCQAGKGIATAQVWDRIAPRLE 288
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A7S0MTN8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTN8_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 2.060e-13 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 481 YTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEEN-PLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTL 861
Y LQM +KL A+ L+ TPFY+TLD+DVL T+ R DL+ G+G Y + N H WW + L + P GVTPAVLST + + + ++H G + +F+ G + WTEYTL
Sbjct: 40 YRLQMLVKLAAAILVETPFYVTLDSDVLLTR-RTRFSDLVVDGRGVYQHDPGNQHGNWWDASKQVLRTTDGCPRQLEGGVTPAVLSTQVSRELLAHIERLHKGR-AWDAALFEQLEGGAD--WTEYTL 163
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A7Y2M003_9MICO (Uncharacterized protein n=2 Tax=Microbacterium ulmi TaxID=179095 RepID=A0A7Y2M003_9MICO) HSP 1 Score: 79.7 bits (195), Expect = 6.830e-13 Identity = 72/240 (30.00%), Postives = 107/240 (44.58%), Query Frame = 1
Query: 415 MVDEKQLLSAVGVDKLESRWYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDV-----EENPLGGGFGVTPAVLSTSGAELTVDRLRKVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRVFDTLHAIG-----PTKLLGDDSVWF-----SQQFDDWNVTAAFDEGPAAFVVVQSTAQVGILRILRKLRQGLEGEG 1089
+VDEK ++ + D + W Q +KL A +++RTP+++TLDADV+ + + E LLP G+ + E AH WW ++A L + P+ FGVTPA++ +R+ + H G + R + D G WTEYTLY T + D L+ P L G SVW S+ D + P AF V QS + + +R L G G
Sbjct: 75 VVDEKDVIPHLDHDA--AGWMK---QQVIKLAAPAVVRTPWFITLDADVVAARP-VDREFLLPGGRALWQQESAGAHMDWWRNSARVLRSGLVIDSDQPV---FGVTPAIMHAPSLVALGERIEREHPGM-HWTRTLMDLADEG----WTEYTLYWTHVLDTGAADALYTASGDGDRPYSLNG--SVWVGDHLSSRALRDQLADVFSPDAPHAFFVFQSNLDRPLAETVALVRPLLGGHG 298
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: UPI0019382A54 (DUF6492 family protein n=1 Tax=Venatorbacter cucullus TaxID=2661630 RepID=UPI0019382A54) HSP 1 Score: 72.8 bits (177), Expect = 1.160e-10 Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 1
Query: 409 IIMVDEKQLLSAVGVDKLESRWYTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKGRLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPLGG---GFGVTPAVLSTSGAELTVDRLRKVHGGHD--EFFRRIFDA-----WSVGG--ERWWTEYTLYRTALDHFRVFDTLHAIG-----PTKLLGDDSVWFSQQFDDWNVTAAF-DEGPAAFVVVQS 1026
II++ E QLL + K + + Q +K+ AS L+ + FY+T DAD++ + + SE+DL+ GK E RN HP WW +A L +G G VTPA+L+T + + ++ + E + W +G + WTEY+LY +FD H P L +D++ +D+W+ +F D P F ++ S
Sbjct: 66 IIVIPESQLLPEL---KNYPKMRGWRKQQLIKIAASKLISSDFYLTFDADIVALR-KFSEKDLIVSGKAILQYEPRNRHPKWWKASARLLKTSHK-IGDKTRGMSVTPAILATKICQKLMTDIQSQSKKYTWAEIICNLHIPSNPRNWWIGNYLKLKWTEYSLYYLCSQKHDLFDRYHIEAGTDSLPQLLFVNDTL----DYDNWDPANSFIDTNPGLFCIIGS 280
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Match: A0A482SN02_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN02_9ARCH) HSP 1 Score: 72.4 bits (176), Expect = 3.140e-10 Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 1
Query: 469 RW--YTYTLQMTLKLLASSLMRTPFYMTLDADVLCTKG-RLSEEDLLPQGKGNYVPEGRNAHPGWWSHAAHTLDVEENPLGGGFGVTPAVLSTSGAELTVDRLR---------------------KVHGGHDEFFRRIFDAWSVGGERWWTEYTLYRTALDHFRV 891
RW + Y LQM +KLLA+ + T +Y+ LDADV + LS+ + Y E + H WW + L + FGVTPA+LST G+ LT ++ + ++E + F VGG W TEYTLYRT LDH+ V
Sbjct: 209 RWTIFPYGLQMAIKLLAAQHVHTSYYLVLDADVFLLRPFELSQLIAAEPPRAVYRREPWSVHSLWWQGSRALLGLGGVDTRASFGVTPALLSTWGSMLTTQHIKAALCSRASSNQCAIGDSSCAAQCSALYEEMWLDSFGR--VGGTIW-TEYTLYRTVLDHYNV 370 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.56.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.56.3 >prot_P-littoralis_Contig16.56.3 ID=prot_P-littoralis_Contig16.56.3|Name=mRNA_P-littoralis_Contig16.56.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=326bp MEHRLEASNSAHFDSRFKHKLSVRMSVCERPPTAYLLYVDSSPPSPCPARback to top mRNA from alignment at P-littoralis_Contig16:183108..187488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.56.3 ID=mRNA_P-littoralis_Contig16.56.3|Name=mRNA_P-littoralis_Contig16.56.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4381bp|location=Sequence derived from alignment at P-littoralis_Contig16:183108..187488+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:183108..187488+ >mRNA_P-littoralis_Contig16.56.3 ID=mRNA_P-littoralis_Contig16.56.3|Name=mRNA_P-littoralis_Contig16.56.3|organism=Pylaiella littoralis U1_48|type=CDS|length=978bp|location=Sequence derived from alignment at P-littoralis_Contig16:183108..187488+ (Pylaiella littoralis U1_48)back to top |