mRNA_P-littoralis_Contig1594.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI) HSP 1 Score: 342 bits (878), Expect = 3.750e-107 Identity = 158/216 (73.15%), Postives = 183/216 (84.72%), Query Frame = 1
Query: 1 SVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCK 648
+VD+FM EL+ F KHRR YKTQR AF E KLTI++GEVLC+VDFQERLQ+ +QDEVQSQHW + ATTIFPC IFF+ DGRVW YSFQILSDDM QDNAWVQ+VM+KLL++DIPALLR++GA+PM R TI+TDNCAKQFKCRFHFGWVADA I LDK G+ TG RVH+EHHYFGACHGKNVSD+EG +TKEY R+M+ N W VASS DLC+
Sbjct: 532 TVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCE 747
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI) HSP 1 Score: 271 bits (693), Expect = 8.000e-83 Identity = 129/216 (59.72%), Postives = 159/216 (73.61%), Query Frame = 1
Query: 1 SVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLCK 648
+VD+F E+R I + KHRRQ+ QR FNE T+++G+V+ VVDFQE+LQL +QDEVQSQHW + TIFP I+F+ GRVW YSFQ+L+DD TQDN WVQYVM +LLS +P LLR+VGA PM +A IFTDNCAKQFKCRFHFGWVA + + D G+AT R+ +EHHYFG+CHGK+ SDSEGAITK R V N W V + E LC+
Sbjct: 522 TVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCE 737
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI) HSP 1 Score: 267 bits (682), Expect = 8.730e-82 Identity = 123/215 (57.21%), Postives = 155/215 (72.09%), Query Frame = 1
Query: 1 SVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDLC 645
+VDDF E + IF R+ HRRQY QR AF+E T+++G V+ V DFQE+LQL +QDEVQ+QHW + TIFPC I+F+ GRVW YSFQ+LSDD TQD+AWVQ+VM K+L++ +PAL+R++GA M A FTDNCAKQFKCRFHFGW+A + D G++T VH+EHHYFG+CHGK+ SDSEGA TK R + N W V S LC
Sbjct: 392 TVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLC 606
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.340e-49 Identity = 88/170 (51.76%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 133 VVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITKEYARQMVTNTRWTVASSEDL 642
V DFQE+L+L +QDEVQSQHW TIFPC I + GR DNAWVQ+VM K++++ +PAL+R++GA M RA FTDNCAKQFKCRFHFGW+A ++ D G +T VH+EHHYFG+CHG + SDSEGA TK RQ + N W V L
Sbjct: 455 VFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHL 609
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.590e-43 Identity = 79/163 (48.47%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 67 YKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNV 555
+ T+RI LT+++G V+ V DFQE+ QL +QDEVQSQHW + TIF C I+ + R+W YS+Q+LSDD TQDNAW A P FTDNCAKQFKCRFHFGW+A ++ D G++T VH+EHHYFG+CHGK+V
Sbjct: 6 HPTERIQ--RTSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAW---------------------ALPPWCELFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKSV 145
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE) HSP 1 Score: 150 bits (379), Expect = 9.540e-39 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 229 IFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAIT 579
I+F+ GRVW SFQ+LSDD TQDNAW Q VM KL+++ +P L+R++GA M RA FTDNCAK+FKCR HFGW+A ++ D G++T VH EHHYFG+CHGK+V T
Sbjct: 120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKSVQSPRHLCT 236
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE) HSP 1 Score: 145 bits (365), Expect = 3.250e-38 Identity = 89/226 (39.38%), Postives = 108/226 (47.79%), Query Frame = 1
Query: 67 YKTQRIAFNELKLTIQDGEVLCV-VDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAE---PMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGK-----------------------------NVSDSEGAITKEYARQMVTNTRWTVASSEDLC 645
+ T+RI N L G C + QE+LQL +QDEVQ QHW TIFPC I+F+ GRVW YSFQ+LSD +RVGA M RA FTDNCAKQFKCRFHFGW+A ++ D G +T VH+EHH+FG+CHGK + SD +GA TK Q + N W V LC
Sbjct: 10 HPTERIQRNSPYLR---GRYGCFRLRLQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLC 212
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A815R815_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815R815_9BILA) HSP 1 Score: 71.2 bits (173), Expect = 6.220e-11 Identity = 45/171 (26.32%), Postives = 79/171 (46.20%), Query Frame = 1
Query: 70 KTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITK 582
+ Q F ++K +D V+C VD+ E + +QD++QS HWGK +IF +F G SF ++S+ +T + V + ++++ I +L + F+DN + QFK R+ ++ + + +D + YF + HGK V D G K
Sbjct: 139 RKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDQIQSAHWGKKFVSIFTAYAWFGGSGGDG-QSFGLVSNSITHNKYSVITCLEIIINEIISMIL------DVNEVIFFSDNASSQFKNRYVINYLTNM-LDTMD---------IDFNWSYFASAHGKGVVDGVGGTLK 292
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A816W7B1_9BILA (Hypothetical protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816W7B1_9BILA) HSP 1 Score: 71.2 bits (173), Expect = 7.840e-11 Identity = 45/171 (26.32%), Postives = 79/171 (46.20%), Query Frame = 1
Query: 70 KTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITK 582
+ Q F ++K +D V+C VD+ E + +QD++QS HWGK +IF +F G SF ++S+ +T + V + ++++ I +L + F+DN + QFK R+ ++ + + +D + YF + HGK V D G K
Sbjct: 286 RKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDQIQSAHWGKKFVSIFTAYAWFGGSGGDG-QSFGLVSNSITHNKYSVITCLEIIINEIISMIL------DVNEVIFFSDNASSQFKNRYVINYLTNM-LDTMD---------IDFNWSYFASAHGKGVVDGVGGTLK 439
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Match: A0A816PPR9_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816PPR9_9BILA) HSP 1 Score: 63.9 bits (154), Expect = 1.350e-8 Identity = 43/171 (25.15%), Postives = 75/171 (43.86%), Query Frame = 1
Query: 70 KTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMTKLLSDDIPALLRRVGAEPMERATIFTDNCAKQFKCRFHFGWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGAITK 582
+ Q F ++K +D V+C VD+ E + +QD++QS HWGK IF +F G SF ++S+ + + V + ++S+ I + + F+DN + +FK R+ ++ + +D + YF + HGK V D G K
Sbjct: 40 RKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDKIQSAHWGKNFVPIFTAYGWFGGSGGDG-QSFGLVSNSIIHNKYSVITCLEIIISEIISMM------PDVNEVIFFSDNASSEFKNRYVINYLTSM-LDTMD---------IDFSWSYFASAHGKGVVDGVGGTLK 193 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1594.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1594.3.1 >prot_P-littoralis_Contig1594.3.1 ID=prot_P-littoralis_Contig1594.3.1|Name=mRNA_P-littoralis_Contig1594.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp MLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQback to top mRNA from alignment at P-littoralis_Contig1594:8416..9063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1594.3.1 ID=mRNA_P-littoralis_Contig1594.3.1|Name=mRNA_P-littoralis_Contig1594.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig1594:8416..9063+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1594:8416..9063+ >mRNA_P-littoralis_Contig1594.3.1 ID=mRNA_P-littoralis_Contig1594.3.1|Name=mRNA_P-littoralis_Contig1594.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig1594:8416..9063+ (Pylaiella littoralis U1_48)back to top |