mRNA_P-littoralis_Contig159.65.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig159.65.1
Unique NamemRNA_P-littoralis_Contig159.65.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE)

HSP 1 Score: 582 bits (1500), Expect = 1.060e-195
Identity = 292/511 (57.14%), Postives = 361/511 (70.65%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEA--LSVGGAGDC---AEEEPLLRFRNGAAP--GVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE-VWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            GAKHANKA GP KW+ +H  DGFA D FY  DAHGVDLPVSIHQGV P  LEKG+ G+I YF R+L SKWL   ELL+V YDR  LVPVIK  EQ GRTEK+ EC++ FDP S +P+P+ QY PWLR+D KA RDGIAANLA +VLAD++W+ D   +  +AFYGV  EP        G+ AE   L +GG G     +  EPLL FRNG  P  GV+RQRGPDIGEAEL ++HFIV AKRYWG++F KW+V+SVDTD WMIILLAM+TG ++P+G GAV+VTVQ++V G  +FLW+NR FA ICEL+ G  SA P   F G  P  NDKVRLFVL +L +GCD+LP +SGLPFDKMW  ALKSVR +G+F  PLF ++ +  W V ++E        FF+K+E AF     T   ++  +  +V+ YVDVIR+ I++L  K+TTATCP F SLR Q+ER +A+  YWQ+GL+ TMP   F   GW VDP+ KG + +ELT  NCVL LSE
Sbjct:  333 GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSE 843          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 582 bits (1500), Expect = 8.880e-187
Identity = 292/511 (57.14%), Postives = 361/511 (70.65%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEA--LSVGGAGDC---AEEEPLLRFRNGAAP--GVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE-VWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            GAKHANKA GP KW+ +H  DGFA D FY  DAHGVDLPVSIHQGV P  LEKG+ G+I YF R+L SKWL   ELL+V YDR  LVPVIK  EQ GRTEK+ EC++ FDP S +P+P+ QY PWLR+D KA RDGIAANLA +VLAD++W+ D   +  +AFYGV  EP        G+ AE   L +GG G     +  EPLL FRNG  P  GV+RQRGPDIGEAEL ++HFIV AKRYWG++F KW+V+SVDTD WMIILLAM+TG ++P+G GAV+VTVQ++V G  +FLW+NR FA ICEL+ G  SA P   F G  P  NDKVRLFVL +L +GCD+LP +SGLPFDKMW  ALKSVR +G+F  PLF ++ +  W V ++E        FF+K+E AF     T   ++  +  +V+ YVDVIR+ I++L  K+TTATCP F SLR Q+ER +A+  YWQ+GL+ TMP   F   GW VDP+ KG + +ELT  NCVL LSE
Sbjct: 1352 GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSE 1862          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JHH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH4_9PHAE)

HSP 1 Score: 505 bits (1301), Expect = 2.360e-170
Identity = 267/510 (52.35%), Postives = 333/510 (65.29%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEP---AEEESIET-GISAEALSVGGAGDCAEEEPLLRFRNGA--APGVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE-VWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            G KHA+KA GP KW+ +H  DGFA D F+  DAHGVDLPVSIHQGV P  LEKG+ G+I YF R+L SKWL   EL LV YDR  LVPVIK  EQ GRTEK+ EC++ FDP S  P+P+ QY PWLR+D KA RDGIAA LA +VLAD++W+ D   +  +AFY V SEP   A+  +++  G+  E   VG     +  EPLL FR G    PGV+RQRGPDIGEAEL                   W V+SVDTD WM ILLAM+TG ++P+G GAV+VTVQ++V G  +FLW+NR FA ICEL+ G  SA P   F G  P  N KVRLFVL +L  GCD+LP +SGLPFDKMW  ALKSVR +G+F  PLF ++ + +W V +DE        FF+K E AF         ++  +  +V+ YVDV R+ I+ L  K+TTATCP   SLR Q+ER +A+  YWQ+GL+ TMP   F   GW +DP+ KG + +ELT  NCVL LS+
Sbjct:    7 GVKHASKAAGPRKWVREHCADGFADDPFFDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELFLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTGPVPSLQYGPWLRADGKAARDGIAAYLAMRVLADEVWTGDTNPNGIVAFYCVGSEPGLSADHPTVDAEGVGLEMGGVGATEALSGTEPLLHFRKGNDHTPGVKRQRGPDIGEAEL------------------SWTVSSVDTDLWMTILLAMATGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPLLTFRGWIPTDN-KVRLFVLTFLDLGCDYLPAISGLPFDKMWVLALKSVRTEGLFDKPLFFEEQDGMWAVHVDECAKLLATMFFYKVEAAFGTAHLAPPQLVESVDGDVEGYVDVTRYAILELPKKQTTATCPSSFSLRKQAERDNAIFRYWQNGLRGTMPATEFAGKGWSLDPRGKGSDGDELTKENCVLDLSD 497          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JT24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT24_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 5.620e-160
Identity = 260/571 (45.53%), Postives = 333/571 (58.32%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEALSVGGAGDCAEEEPLLRFRNGA--APGVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRI-----------------------------------------VVGVP-RFLWV-----------------------NRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE-VWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            GAKHANKA  PLKW+ +H  DGFA D FY  DAHGVDLPVSIHQGV P  LEKG+ G+I YF ++ +SKWL   EL +V YDR  LVP I+ HEQ GRTE + EC++ FDP S +P+P   +  WLR D KA RDGIAANLA +VLAD +W+ D   +  +AFYGV  EP        G+ A+   VG      E  PLL  R+     P V+R RGPDIGEAEL ++HFI +AK+YWG+ F KW+ +SVDTD WMIILLAM+TG + P+G   V  ++  +                                         + G+P   +WV                          FA ICEL+ G  SA P   F    P   DKVRLFVL +L +GCD LP +SGLPFDKMW   LKSVR +G+F  PLF ++ +  W VD+DE        FF+K+E AF   + +   +L  +  +V+DYV ++R+VI+ L  K+TTATCP   +LR Q ER +A+  Y Q+GL+ETMP   F   GWGV+ + KG +++ELT  NCVLWLSE
Sbjct:   27 GAKHANKAADPLKWVREHCADGFAVDPFYGADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKKQFFSKWLKSTELFVVCYDRQELVPAIRGHEQLGRTETLGECSRTFDPKSTDPVPLLHHGSWLRVDGKAARDGIAANLAMRVLADDVWTADTKPNGIVAFYGVGGEPRLSADNPAGVDAD---VG-----LETVPLLHVRDETDPIPDVERHRGPDIGEAELFVIHFIARAKKYWGKTFDKWVASSVDTDLWMIILLAMTTGWLPPRGEEFVFASICELQDGSESAWPPVTFRSWVPTDADKVRLFVLTFLESGCDCLPAISGLPFDKMWVLVLKSVRTEGLFDKPLFFEEQXEEFVFASICELQDGSESAWPPVTFRSWVPTDADKVRLFVLTFLESGCDCLPAISGLPFDKMWVLVLKSVRTEGLFDKPLFFEEQDGTWAVDVDECAKLLATMFFYKDEAAFGSAQLSPPQLLESVDGDVEDYVSLVRYVILHLPKKKTTATCPSSVALRKQEERGNAIFRYCQNGLRETMPTTEFAGKGWGVEIRGKGSDSDELTAENCVLWLSE 589          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE)

HSP 1 Score: 454 bits (1168), Expect = 2.470e-151
Identity = 229/371 (61.73%), Postives = 273/371 (73.58%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEA--LSVGGAGDC---AEEEPLLRFRNGAAP--GVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVF 1089
            GAKHANKA GP KW+ +H  DGFA D FY  DAHGVDLPVSIHQGV P  LEKG+ G+I YF R+L S WL   ELLLV YDR  LVPVIK  EQ GRTEK+ EC++ FDP S +P+P+ QY PWLR+D KA RDGIAANLA +VLAD++W+ D   +  +AFYGV  EP        G+ AE   L +GG G     +  EPLL FRNG  P  GV+RQRGPDIGEAEL ++HFIV AKRYWG++F KW+V+SVDTD WMIILLAM+TG ++P+G GAV+VTVQ++V G  +FLW+NR FA ICEL+ G  SA P   F G  P  NDKVRLFVL +L +GCD+LP +SGLPFDKMW  ALKSVR +G+F
Sbjct:  244 GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSTWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLF 614          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JJI8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI8_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 2.080e-139
Identity = 248/547 (45.34%), Postives = 309/547 (56.49%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEALSVGGAGDCAEEEPLLRFRNGAAPGVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE------------VWVVDIDE----------------------------------------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            GAKHANKA GP KW+  H  DGFA D FY+ D HGVDLPVSIH GV    LEKG+ G+I YF ++L SKWL   ELL+V YDR  LVPVIK HEQ GRTEK+ EC++ FDP S +P+P+ QY PWLR+D KA R  IAA+LA +VLAD +W+ D   +  +AFYGV  EP        G+ AE + +    +   E+           GV+RQRG DIGEAEL + HFIV AK+YWG+ F KW+V+S DTD WMIILLAM+TG + P+G                             E   G  SA P   FG   P  +DKVRLFVL +L +GCD+LP +SGLPFDKMW   LKSVR + VF    F KD              V  VD D                                         FF+K+E AF     T   ++  +  +V+ YV VIR+ I++L  K+TTATCP + SLR Q+ER +A+  YWQ+GL+E MP   F  +GW VDP+ KG +  ELT  +CVL LSE
Sbjct:  687 GAKHANKAAGPGKWVRGHCADGFADDPFYEADTHGVDLPVSIHHGVHREYLEKGTAGIIDYFKKQLLSKWLQSTELLVVCYDRQELVPVIKGHEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARVEIAAHLATRVLADDVWTGDTKPNGIVAFYGVGGEPDLSVDHPPGVDAEGIDL----EVGREDGTDMIE-----GVERQRGSDIGEAELSVTHFIVWAKKYWGKSFDKWVVSSADTDLWMIILLAMTTGWLTPRG-----------------------------ERADGSESAWPPLTFGNWIPTDDDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLVLKSVRTE-VFNTLFFYKDEAAFGTAHFTPAQVVQSVDGDVEAYVGVIRYAILQLPKKKTTATCLSYYSLRKQAERVFNTLFFYKDEAAFGTAHFTPAQVVQSVDGDVEAYVGVIRYAILQLPKKKTTATCPSYYSLRKQAERGNAIFRYWQNGLREAMPATEFAGNGWSVDPRGKGNDGVELTVKDCVLDLSE 1194          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 2.050e-137
Identity = 236/489 (48.26%), Postives = 290/489 (59.30%), Query Frame = 1
Query:  214 MERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEALSVGGAGD-----CAEEEPLLRFRNGAAPG--VQRQRGPDIGE--------------------------------------------------AELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNEVWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            M  +LL+V  DR  LV VIK  E   RTE++  C +  DP S E IP+SQ QPWLR++SK  RDGIAANLA  VLADK W  D     T+AFYGV  E    +  +    +EA    G  D      +  E LL FRNG+  G  VQR+ GP                                                       ELP+ HFIV A++YWG+   KWLVTSVDTD W+IILLAMSTGKI P G   V+VTVQRIV G  +FLWVNR + KI +L+ G  SA PAA F G TP  ++KVRLFVLIYLLAGCDFLP +SGLPF KMW  ALKSVRA+GVF + LFV ++ VW V+I++        F+F+ E AF     T G +L  ++D+V++YVD+IR  IV+LG K TT TCP + S+R Q  R  +V GYWQDG K+ MP+R+F   GWG+DPKAKG  A  LTG N V+W+SE
Sbjct:    1 MNTDLLVVCCDRAELVTVIKGQEPLARTEQVGVCTRDVDPSSTESIPSSQLQPWLRANSKEARDGIAANLAMNVLADKNWDGDQKPTGTVAFYGVGGEVGLRDVQQYNEMSEAFGADGEADEGGWYGSGPEHLLHFRNGSTSGTVVQREGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELPVAHFIVWAEKYWGKKLDKWLVTSVDTDLWIIILLAMSTGKILPYGIDKVDVTVQRIVGGAAKFLWVNRVYNKIADLKDGSESAWPAADFQGWTPTADEKVRLFVLIYLLAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKWTTDTCPTYRSMREQCLRMKSVDGYWQDGFKDHMPERDFNRKGWGIDPKAKGSNASALTGENSVMWMSE 489          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5KG39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG39_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 3.690e-137
Identity = 240/490 (48.98%), Postives = 289/490 (58.98%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLAK-VLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEALSVGGAG---------------DCAEEEPLLRFRNGAAPGVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPA--AGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNEVWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNF 1392
            GAKHANK+ GP KWL+DH  +  A + FY   AHGVDLPVSIHQGVR  DLE G+ GVI YFV EL S+W ME +LLLV YDR  LVP IK  EQ+GRT+KI  C   FDP S +PIP SQYQ WLR + KA RDG AA+LA  +L DK W+ D      +AFY V  E      ++T  +A+     G G               D  E   +    +G    VQR+RGP IGEAELPLVHFIV AK+YWG +F  WLVTSVDTD WMI+LLAM+TG +K  G GAVEVTVQ++V G P+++WVNR FA I  L  G  SA P   +GF G  PD ++K                            A ALKSVR +G            VW V IDE        F+ K+  AF RG +  G IL  ++D+V  YV+VIR +I+R G  R TATCP FES+R QSER   V+GYWQDG  E +P R+F
Sbjct:   44 GAKHANKSAGPTKWLQDHSSNAVADEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGVINYFVSELDSRWRMEADLLLVCYDRAQLVPAIKGREQSGRTDKIGGCTLSFDPTSMDPIPQSQYQSWLRDNQKAARDGFAAHLAMDILDDKRWTGDCTPRGIVAFYSVGGEAG----LKTPHAADPAVSSGGGVPGGPSTSPEVPVPVDGVESSTIHSGGDGTEXSVQRERGPKIGEAELPLVHFIVWAKKYWGLNFENWLVTSVDTDHWMIMLLAMNTGFLKASGKGAVEVTVQKVVGGAPKYIWVNRVFAAISGLRDGNESAWPTTDSGFQGWIPDDDEK----------------------------ALALKSVRTEG-----------GVWGVKIDECIKLLATIFYLKHAAAFARGGQEPGWILRMVNDDVAHYVEVIRLLILRRGSNRATATCPAFESMRQQSERGHQVLGYWQDGCLEVVPVRDF 490          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 2.860e-135
Identity = 225/408 (55.15%), Postives = 270/408 (66.18%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSED---NG-----------------------------RDRTIAFYGVCSEPAEEESIETGISAEA--LSVGGAGDC---AEEEPLLRFRNGAAP--GVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLF 1104
            GAKH +KA GP KW+ +H  DGFA D FY  DAHGV L VSIHQGV P  LEK + G+I YF  +  SKWL   ELLLV YDR  LVPVIK  EQ GRTEK+ EC++ FDP S +P+P+ QY PWLR+D K  RDGIAA LA +VLAD++W+ D   NG                                 +AFYGV  EP        G+ AE   L +GG G     +  EPLL FRNG  P  GV+RQRGPDIGEAEL ++HFIV AKRYWG++F KW+V+SVDTD WMIILLAM+TG ++P+G GAV+VTVQ++V G  +FLW+NR+FA ICEL+ G  SA P   F G  P  NDKVRLFVL +L +GCD+LP +SGLPFDKMW  ALKS R +G+F  PLF
Sbjct:  640 GAKHVSKAAGPGKWVREHCADGFADDLFYDADAHGVHLSVSIHQGVHPEYLEKATAGIIDYFKSQPLSKWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKVTRDGIAAYLAMRVLADEVWTGDTKSNGIVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRAFAGICELQGGSESAWPLLTFRGWNPKNNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSGRTEGLFDKPLF 1047          
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Match: A0A6H5JJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH5_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 4.300e-135
Identity = 223/509 (43.81%), Postives = 288/509 (56.58%), Query Frame = 1
Query:    1 GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLDLEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTEKIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLA-KVLADKMWSEDNGRDRTIAFYGVCSEPAEEESIETGISAEA---LSVGGAGDCAEEEPLLRFRNGAAP--GVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTDEWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELEAGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMWAFALKSVRAQGVFKNPLFVKDNE-VWVVDIDE--------FFFKNETAFRRGERTAGMILADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGYWQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE 1482
            G KHANKA               A D FY  DAHGVDLPVSIHQGV P +LEKG+ G+I YF ++L SKWL   ELL+V YDR  LVP I+ HEQ G TEK+ EC++ FDP S  P+P+ QY  WLR+D KA RDGIA NL  +VLAD +W+ D   +  +AFYGV  EP+       G+ A+    + VG     AE  PLL FR+G  P   V+R RGPDIGEAEL ++HFI +A +                                                           FA ICEL+ G GSA P   F    P   DKVRLF+  +L +GCD+LP +SGLPFDKMW   LKS+R +G+F  PLF ++ +  W +D+DE        FF+K+E AF     +   +L  +  +V+DYV ++R+ I++L  K+TTATCP   +L  Q+ER +A+  YWQ+GL+E MP   F   GWGVDP+ KG +++EL   NCVLWLSE
Sbjct:   35 GTKHANKA---------------AVDPFYDADAHGVDLPVSIHQGVHPENLEKGTAGIIDYFKKKLLSKWLKSTELLVVCYDRQELVPAIQGHEQLGMTEKLEECSRTFDPKSTNPVPSLQYGSWLRTDVKAARDGIATNLVMRVLADDVWTADTKPNGIVAFYGVGGEPSLSADNPAGVDADVGLGMGVGTTEALAETVPLLHFRDGTDPISDVERHRGPDIGEAELSVIHFIARAMKV----------------------------------------------------------FASICELQDGSGSAWPPVTFRSWDPTDADKVRLFIQTFLESGCDYLPAISGLPFDKMWVLVLKSMRTEGLFDKPLFFEEQDGTWAMDVDECAKQLATMFFYKDEAAFGSAHLSPAQLLESVDGDVEDYVSLVRYDILQLPKKKTTATCPSSFALCKQAERGNAIFRYWQNGLREAMPTTEFAYEGWGVDPRGKGSDSDELIAENCVLWLSE 470          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTG2_9PHAE1.060e-19557.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6D9_9PHAE8.880e-18757.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHH4_9PHAE2.360e-17052.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT24_9PHAE5.620e-16045.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAK2_9PHAE2.470e-15161.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJI8_9PHAE2.080e-13945.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD3_9PHAE2.050e-13748.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG39_9PHAE3.690e-13748.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1K3_9PHAE2.860e-13555.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJH5_9PHAE4.300e-13543.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:299326..300807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FIA9
Model size1482
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.26e-35
EggNOG OGs2D5KK@1|root,2SYVY@2759|Eukaryota
Cds size1482
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789761.8813407-CDS-P-littoralis_Contig159:299325..3008071680789761.8813407-CDS-P-littoralis_Contig159:299325..300807Pylaiella littoralis U1_48CDSP-littoralis_Contig159 299326..300807 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.65.1prot_P-littoralis_Contig159.65.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig159 299326..300807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig159.65.1

>prot_P-littoralis_Contig159.65.1 ID=prot_P-littoralis_Contig159.65.1|Name=mRNA_P-littoralis_Contig159.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=494bp
GAKHANKAQGPLKWLEDHLQDGFAYDQFYQPDAHGVDLPVSIHQGVRPLD
LEKGSVGVIAYFVRELYSKWLMERELLLVSYDRGILVPVIKEHEQAGRTE
KIWECAQVFDPLSEEPIPTSQYQPWLRSDSKAPRDGIAANLAKVLADKMW
SEDNGRDRTIAFYGVCSEPAEEESIETGISAEALSVGGAGDCAEEEPLLR
FRNGAAPGVQRQRGPDIGEAELPLVHFIVQAKRYWGEDFGKWLVTSVDTD
EWMIILLAMSTGKIKPQGPGAVEVTVQRIVVGVPRFLWVNRSFAKICELE
AGIGSARPAAGFGGRTPDKNDKVRLFVLIYLLAGCDFLPVMSGLPFDKMW
AFALKSVRAQGVFKNPLFVKDNEVWVVDIDEFFFKNETAFRRGERTAGMI
LADIHDNVQDYVDVIRFVIVRLGGKRTTATCPGFESLRLQSERASAVMGY
WQDGLKETMPKRNFKNHGWGVDPKAKGREAEELTGSNCVLWLSE
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mRNA from alignment at P-littoralis_Contig159:299326..300807-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig159.65.1 ID=mRNA_P-littoralis_Contig159.65.1|Name=mRNA_P-littoralis_Contig159.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1482bp|location=Sequence derived from alignment at P-littoralis_Contig159:299326..300807- (Pylaiella littoralis U1_48)
GGGGCTAAGCACGCCAACAAAGCCCAAGGTCCGTTGAAGTGGCTCGAGGA TCATCTCCAGGATGGGTTCGCCTACGACCAGTTCTACCAGCCCGACGCTC ATGGGGTGGACCTACCCGTGTCAATCCACCAAGGAGTAAGGCCTCTCGAC CTAGAGAAGGGGAGTGTGGGAGTCATCGCCTACTTCGTGAGGGAGTTATA CTCGAAATGGCTAATGGAGAGGGAGCTGCTTTTGGTGTCCTACGATCGCG GGATACTCGTGCCGGTTATCAAAGAGCATGAGCAAGCTGGGCGGACAGAG AAGATTTGGGAGTGCGCTCAGGTGTTCGATCCGTTGTCAGAGGAACCAAT CCCTACTTCACAGTATCAGCCGTGGCTTCGATCCGACTCGAAGGCACCAC GGGATGGAATTGCCGCGAACCTCGCCAAGGTACTAGCAGACAAGATGTGG TCAGAAGACAACGGGCGTGATCGGACCATAGCCTTCTACGGTGTCTGTAG TGAGCCTGCCGAGGAAGAGAGCATAGAAACTGGTATTAGCGCCGAGGCTC TCAGTGTTGGGGGGGCGGGGGACTGTGCAGAGGAAGAGCCTCTCCTGCGC TTTCGAAACGGTGCGGCTCCGGGTGTACAGCGACAGCGCGGTCCGGATAT TGGCGAGGCTGAGCTGCCACTTGTTCATTTCATCGTGCAGGCGAAGAGGT ACTGGGGGGAGGACTTCGGCAAGTGGCTCGTCACGTCAGTCGATACGGAT GAGTGGATGATCATCCTACTTGCCATGAGCACGGGAAAGATTAAGCCTCA AGGTCCGGGGGCGGTGGAGGTGACCGTGCAGAGGATTGTGGTTGGTGTCC CCAGGTTCTTGTGGGTCAATCGGTCGTTCGCCAAAATCTGCGAACTCGAG GCCGGCATCGGATCGGCACGGCCCGCCGCTGGCTTCGGAGGTCGGACTCC CGATAAGAATGACAAAGTCCGCCTGTTCGTCTTGATCTACCTCTTGGCGG GGTGCGACTTCCTGCCGGTCATGTCCGGTCTACCCTTCGACAAAATGTGG GCCTTCGCTCTAAAAAGCGTGCGGGCTCAAGGGGTTTTCAAGAACCCCTT GTTCGTGAAGGACAATGAGGTGTGGGTTGTGGACATCGATGAGTTTTTTT TCAAGAACGAGACTGCATTTCGGCGTGGTGAGAGGACCGCAGGGATGATA CTCGCCGACATCCACGACAATGTGCAGGATTATGTCGACGTCATCCGCTT CGTGATCGTCAGGCTTGGTGGCAAGCGGACTACGGCCACTTGTCCAGGTT TCGAGTCGTTGCGTCTGCAGAGTGAACGAGCCAGCGCCGTCATGGGGTAC TGGCAAGATGGCCTGAAAGAGACGATGCCAAAAAGAAACTTCAAAAATCA CGGGTGGGGTGTCGACCCGAAAGCTAAGGGGCGCGAGGCGGAAGAACTAA CAGGGAGCAACTGCGTGTTGTGGTTGTCGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig159:299326..300807-

>mRNA_P-littoralis_Contig159.65.1 ID=mRNA_P-littoralis_Contig159.65.1|Name=mRNA_P-littoralis_Contig159.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1482bp|location=Sequence derived from alignment at P-littoralis_Contig159:299326..300807- (Pylaiella littoralis U1_48)
GGGGCTAAGCACGCCAACAAAGCCCAAGGTCCGTTGAAGTGGCTCGAGGA
TCATCTCCAGGATGGGTTCGCCTACGACCAGTTCTACCAGCCCGACGCTC
ATGGGGTGGACCTACCCGTGTCAATCCACCAAGGAGTAAGGCCTCTCGAC
CTAGAGAAGGGGAGTGTGGGAGTCATCGCCTACTTCGTGAGGGAGTTATA
CTCGAAATGGCTAATGGAGAGGGAGCTGCTTTTGGTGTCCTACGATCGCG
GGATACTCGTGCCGGTTATCAAAGAGCATGAGCAAGCTGGGCGGACAGAG
AAGATTTGGGAGTGCGCTCAGGTGTTCGATCCGTTGTCAGAGGAACCAAT
CCCTACTTCACAGTATCAGCCGTGGCTTCGATCCGACTCGAAGGCACCAC
GGGATGGAATTGCCGCGAACCTCGCCAAGGTACTAGCAGACAAGATGTGG
TCAGAAGACAACGGGCGTGATCGGACCATAGCCTTCTACGGTGTCTGTAG
TGAGCCTGCCGAGGAAGAGAGCATAGAAACTGGTATTAGCGCCGAGGCTC
TCAGTGTTGGGGGGGCGGGGGACTGTGCAGAGGAAGAGCCTCTCCTGCGC
TTTCGAAACGGTGCGGCTCCGGGTGTACAGCGACAGCGCGGTCCGGATAT
TGGCGAGGCTGAGCTGCCACTTGTTCATTTCATCGTGCAGGCGAAGAGGT
ACTGGGGGGAGGACTTCGGCAAGTGGCTCGTCACGTCAGTCGATACGGAT
GAGTGGATGATCATCCTACTTGCCATGAGCACGGGAAAGATTAAGCCTCA
AGGTCCGGGGGCGGTGGAGGTGACCGTGCAGAGGATTGTGGTTGGTGTCC
CCAGGTTCTTGTGGGTCAATCGGTCGTTCGCCAAAATCTGCGAACTCGAG
GCCGGCATCGGATCGGCACGGCCCGCCGCTGGCTTCGGAGGTCGGACTCC
CGATAAGAATGACAAAGTCCGCCTGTTCGTCTTGATCTACCTCTTGGCGG
GGTGCGACTTCCTGCCGGTCATGTCCGGTCTACCCTTCGACAAAATGTGG
GCCTTCGCTCTAAAAAGCGTGCGGGCTCAAGGGGTTTTCAAGAACCCCTT
GTTCGTGAAGGACAATGAGGTGTGGGTTGTGGACATCGATGAGTTTTTTT
TCAAGAACGAGACTGCATTTCGGCGTGGTGAGAGGACCGCAGGGATGATA
CTCGCCGACATCCACGACAATGTGCAGGATTATGTCGACGTCATCCGCTT
CGTGATCGTCAGGCTTGGTGGCAAGCGGACTACGGCCACTTGTCCAGGTT
TCGAGTCGTTGCGTCTGCAGAGTGAACGAGCCAGCGCCGTCATGGGGTAC
TGGCAAGATGGCCTGAAAGAGACGATGCCAAAAAGAAACTTCAAAAATCA
CGGGTGGGGTGTCGACCCGAAAGCTAAGGGGCGCGAGGCGGAAGAACTAA
CAGGGAGCAACTGCGTGTTGTGGTTGTCGGAG
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